Protein–RNA interactions for Protein: Q7Z7F7

MRPL55, 39S ribosomal protein L55, mitochondrial, humanhuman

Known RBP Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55Q7Z7F7 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
MRPL55Q7Z7F7 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC15.07■□□□□ 0
MRPL55Q7Z7F7 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
MRPL55Q7Z7F7 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
MRPL55Q7Z7F7 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
MRPL55Q7Z7F7 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
MRPL55Q7Z7F7 AC093323.1-202ENST00000635031 2045 ntBASIC15.06■□□□□ 0
MRPL55Q7Z7F7 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
MRPL55Q7Z7F7 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
MRPL55Q7Z7F7 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
MRPL55Q7Z7F7 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC15.06■□□□□ 0
MRPL55Q7Z7F7 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC15.06■□□□□ 0
MRPL55Q7Z7F7 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC15.06■□□□□ 0
MRPL55Q7Z7F7 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
MRPL55Q7Z7F7 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC15.06■□□□□ 0
MRPL55Q7Z7F7 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
MRPL55Q7Z7F7 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ 0
MRPL55Q7Z7F7 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC15.05■□□□□ 0
MRPL55Q7Z7F7 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ -0
MRPL55Q7Z7F7 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC15.05■□□□□ -0
MRPL55Q7Z7F7 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
MRPL55Q7Z7F7 AP003733.4-201ENST00000623785 1697 ntBASIC15.05■□□□□ -0
MRPL55Q7Z7F7 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ -0
MRPL55Q7Z7F7 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ -0
MRPL55Q7Z7F7 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
MRPL55Q7Z7F7 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
MRPL55Q7Z7F7 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC15.04■□□□□ -0
MRPL55Q7Z7F7 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC15.04■□□□□ -0
MRPL55Q7Z7F7 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
MRPL55Q7Z7F7 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
MRPL55Q7Z7F7 AC093536.1-201ENST00000569153 554 ntBASIC15.04■□□□□ -0
MRPL55Q7Z7F7 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC15.04■□□□□ -0
MRPL55Q7Z7F7 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC15.04■□□□□ -0
MRPL55Q7Z7F7 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
MRPL55Q7Z7F7 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC15.03■□□□□ -0
MRPL55Q7Z7F7 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
MRPL55Q7Z7F7 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
MRPL55Q7Z7F7 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC15.03■□□□□ -0
MRPL55Q7Z7F7 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
MRPL55Q7Z7F7 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC15.03■□□□□ -0
MRPL55Q7Z7F7 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
MRPL55Q7Z7F7 SLC6A10P-202ENST00000431994 2058 ntBASIC15.03■□□□□ -0
MRPL55Q7Z7F7 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
MRPL55Q7Z7F7 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC15.03■□□□□ -0
MRPL55Q7Z7F7 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC15.03■□□□□ -0
MRPL55Q7Z7F7 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
MRPL55Q7Z7F7 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
MRPL55Q7Z7F7 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC15.03■□□□□ -0
MRPL55Q7Z7F7 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC15.02■□□□□ -0
MRPL55Q7Z7F7 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
MRPL55Q7Z7F7 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
MRPL55Q7Z7F7 AL139125.2-201ENST00000623134 1869 ntBASIC15.02■□□□□ -0
MRPL55Q7Z7F7 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC15.02■□□□□ -0
MRPL55Q7Z7F7 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC15.02■□□□□ -0
MRPL55Q7Z7F7 MIR4449-201ENST00000578365 66 ntBASIC15.02■□□□□ -0
MRPL55Q7Z7F7 AC007029.1-201ENST00000604183 313 ntBASIC15.02■□□□□ -0
MRPL55Q7Z7F7 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC15.02□□□□□ -0.01
MRPL55Q7Z7F7 PKM-204ENST00000449901 2526 ntTSL 2 BASIC15.02□□□□□ -0.01
MRPL55Q7Z7F7 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
MRPL55Q7Z7F7 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC15.02□□□□□ -0.01
MRPL55Q7Z7F7 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
MRPL55Q7Z7F7 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
MRPL55Q7Z7F7 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
MRPL55Q7Z7F7 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
MRPL55Q7Z7F7 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC15.01□□□□□ -0.01
MRPL55Q7Z7F7 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
MRPL55Q7Z7F7 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC15.01□□□□□ -0.01
MRPL55Q7Z7F7 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
MRPL55Q7Z7F7 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC15.01□□□□□ -0.01
MRPL55Q7Z7F7 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
MRPL55Q7Z7F7 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
MRPL55Q7Z7F7 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
MRPL55Q7Z7F7 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
MRPL55Q7Z7F7 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
MRPL55Q7Z7F7 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
MRPL55Q7Z7F7 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
MRPL55Q7Z7F7 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
MRPL55Q7Z7F7 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC15□□□□□ -0.01
MRPL55Q7Z7F7 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
MRPL55Q7Z7F7 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC15□□□□□ -0.01
MRPL55Q7Z7F7 MBP-237ENST00000579129 1052 ntTSL 5 BASIC15□□□□□ -0.01
MRPL55Q7Z7F7 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC15□□□□□ -0.01
MRPL55Q7Z7F7 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC15□□□□□ -0.01
MRPL55Q7Z7F7 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC15□□□□□ -0.01
MRPL55Q7Z7F7 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
MRPL55Q7Z7F7 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
MRPL55Q7Z7F7 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
MRPL55Q7Z7F7 KRT18P10-201ENST00000388836 1287 ntBASIC14.99□□□□□ -0.01
MRPL55Q7Z7F7 GPX1-201ENST00000419349 1106 ntBASIC14.99□□□□□ -0.01
MRPL55Q7Z7F7 GFER-205ENST00000569451 517 ntTSL 5 BASIC14.99□□□□□ -0.01
MRPL55Q7Z7F7 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC14.99□□□□□ -0.01
MRPL55Q7Z7F7 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
MRPL55Q7Z7F7 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC14.99□□□□□ -0.01
MRPL55Q7Z7F7 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
MRPL55Q7Z7F7 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC14.99□□□□□ -0.01
MRPL55Q7Z7F7 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC14.99□□□□□ -0.01
MRPL55Q7Z7F7 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
MRPL55Q7Z7F7 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC14.98□□□□□ -0.01
MRPL55Q7Z7F7 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
MRPL55Q7Z7F7 EED-207ENST00000528180 1745 ntTSL 5 BASIC14.98□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 93.8 ms