Protein–RNA interactions for Protein: Q5H8C1

FREM1, FRAS1-related extracellular matrix protein 1, humanhuman

Predictions only

Length 2,179 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FREM1Q5H8C1 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
FREM1Q5H8C1 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
FREM1Q5H8C1 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC20.89■□□□□ 0.93
FREM1Q5H8C1 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
FREM1Q5H8C1 LONRF2P2-201ENST00000439212 571 ntBASIC20.89■□□□□ 0.93
FREM1Q5H8C1 CEBPA-AS1-201ENST00000592982 2198 ntBASIC20.89■□□□□ 0.93
FREM1Q5H8C1 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
FREM1Q5H8C1 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
FREM1Q5H8C1 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
FREM1Q5H8C1 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
FREM1Q5H8C1 MIR4281-201ENST00000580852 62 ntBASIC20.88■□□□□ 0.93
FREM1Q5H8C1 TRIR-205ENST00000592273 783 ntTSL 3 BASIC20.88■□□□□ 0.93
FREM1Q5H8C1 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC20.88■□□□□ 0.93
FREM1Q5H8C1 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
FREM1Q5H8C1 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
FREM1Q5H8C1 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
FREM1Q5H8C1 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC20.88■□□□□ 0.93
FREM1Q5H8C1 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
FREM1Q5H8C1 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
FREM1Q5H8C1 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC20.88■□□□□ 0.93
FREM1Q5H8C1 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
FREM1Q5H8C1 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
FREM1Q5H8C1 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC20.87■□□□□ 0.93
FREM1Q5H8C1 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC20.87■□□□□ 0.93
FREM1Q5H8C1 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
FREM1Q5H8C1 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
FREM1Q5H8C1 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC20.86■□□□□ 0.93
FREM1Q5H8C1 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
FREM1Q5H8C1 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC20.86■□□□□ 0.93
FREM1Q5H8C1 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
FREM1Q5H8C1 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
FREM1Q5H8C1 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
FREM1Q5H8C1 PRTG-204ENST00000561292 833 ntTSL 3 BASIC20.86■□□□□ 0.93
FREM1Q5H8C1 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC20.86■□□□□ 0.93
FREM1Q5H8C1 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
FREM1Q5H8C1 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
FREM1Q5H8C1 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
FREM1Q5H8C1 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC20.85■□□□□ 0.93
FREM1Q5H8C1 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
FREM1Q5H8C1 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
FREM1Q5H8C1 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
FREM1Q5H8C1 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC20.85■□□□□ 0.93
FREM1Q5H8C1 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
FREM1Q5H8C1 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC20.84■□□□□ 0.93
FREM1Q5H8C1 SLC6A10P-202ENST00000431994 2058 ntBASIC20.84■□□□□ 0.93
FREM1Q5H8C1 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC20.84■□□□□ 0.93
FREM1Q5H8C1 KRT18P24-201ENST00000344739 1156 ntBASIC20.84■□□□□ 0.93
FREM1Q5H8C1 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
FREM1Q5H8C1 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.93
FREM1Q5H8C1 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC20.83■□□□□ 0.93
FREM1Q5H8C1 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
FREM1Q5H8C1 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
FREM1Q5H8C1 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
FREM1Q5H8C1 AC145676.1-201ENST00000514988 2004 ntBASIC20.83■□□□□ 0.92
FREM1Q5H8C1 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
FREM1Q5H8C1 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
FREM1Q5H8C1 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC20.82■□□□□ 0.92
FREM1Q5H8C1 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
FREM1Q5H8C1 HES6-204ENST00000409182 863 ntTSL 2 BASIC20.82■□□□□ 0.92
FREM1Q5H8C1 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
FREM1Q5H8C1 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
FREM1Q5H8C1 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC20.82■□□□□ 0.92
FREM1Q5H8C1 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
FREM1Q5H8C1 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
FREM1Q5H8C1 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
FREM1Q5H8C1 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
FREM1Q5H8C1 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
FREM1Q5H8C1 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC20.81■□□□□ 0.92
FREM1Q5H8C1 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC20.81■□□□□ 0.92
FREM1Q5H8C1 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC20.81■□□□□ 0.92
FREM1Q5H8C1 SHF-207ENST00000560540 2062 ntTSL 5 BASIC20.81■□□□□ 0.92
FREM1Q5H8C1 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
FREM1Q5H8C1 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC20.8■□□□□ 0.92
FREM1Q5H8C1 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC20.8■□□□□ 0.92
FREM1Q5H8C1 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
FREM1Q5H8C1 AL031848.2-201ENST00000607670 837 ntBASIC20.8■□□□□ 0.92
FREM1Q5H8C1 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
FREM1Q5H8C1 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
FREM1Q5H8C1 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
FREM1Q5H8C1 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
FREM1Q5H8C1 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
FREM1Q5H8C1 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
FREM1Q5H8C1 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
FREM1Q5H8C1 FOXO3B-201ENST00000395675 1928 ntBASIC20.8■□□□□ 0.92
FREM1Q5H8C1 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
FREM1Q5H8C1 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
FREM1Q5H8C1 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
FREM1Q5H8C1 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC20.79■□□□□ 0.92
FREM1Q5H8C1 GUSBP5-201ENST00000418136 578 ntBASIC20.79■□□□□ 0.92
FREM1Q5H8C1 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC20.79■□□□□ 0.92
FREM1Q5H8C1 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
FREM1Q5H8C1 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
FREM1Q5H8C1 Z92544.1-202ENST00000571933 1220 ntBASIC20.79■□□□□ 0.92
FREM1Q5H8C1 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC20.79■□□□□ 0.92
FREM1Q5H8C1 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC20.79■□□□□ 0.92
FREM1Q5H8C1 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
FREM1Q5H8C1 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
FREM1Q5H8C1 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
FREM1Q5H8C1 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC20.79■□□□□ 0.92
FREM1Q5H8C1 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 35.4 ms