Protein–RNA interactions for Protein: P56277

CMC4, Cx9C motif-containing protein 4, humanhuman

Predicted RBP Predictions only

Length 68 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMC4P56277 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC17.6■□□□□ 0.41
CMC4P56277 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC17.6■□□□□ 0.41
CMC4P56277 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CMC4P56277 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
CMC4P56277 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
CMC4P56277 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CMC4P56277 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CMC4P56277 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
CMC4P56277 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
CMC4P56277 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CMC4P56277 FOXO3B-201ENST00000395675 1928 ntBASIC17.59■□□□□ 0.41
CMC4P56277 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
CMC4P56277 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
CMC4P56277 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CMC4P56277 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CMC4P56277 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
CMC4P56277 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC17.59■□□□□ 0.41
CMC4P56277 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC17.58■□□□□ 0.41
CMC4P56277 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC17.58■□□□□ 0.41
CMC4P56277 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC17.58■□□□□ 0.4
CMC4P56277 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC17.58■□□□□ 0.4
CMC4P56277 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC17.58■□□□□ 0.4
CMC4P56277 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CMC4P56277 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC17.57■□□□□ 0.4
CMC4P56277 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC17.57■□□□□ 0.4
CMC4P56277 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
CMC4P56277 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CMC4P56277 BEX3-202ENST00000372634 753 ntTSL 2 BASIC17.57■□□□□ 0.4
CMC4P56277 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC17.57■□□□□ 0.4
CMC4P56277 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC17.57■□□□□ 0.4
CMC4P56277 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CMC4P56277 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
CMC4P56277 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC17.57■□□□□ 0.4
CMC4P56277 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
CMC4P56277 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC17.56■□□□□ 0.4
CMC4P56277 KRT18P24-201ENST00000344739 1156 ntBASIC17.56■□□□□ 0.4
CMC4P56277 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
CMC4P56277 AC011551.1-201ENST00000614101 683 ntBASIC17.56■□□□□ 0.4
CMC4P56277 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CMC4P56277 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CMC4P56277 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CMC4P56277 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CMC4P56277 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CMC4P56277 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
CMC4P56277 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC17.55■□□□□ 0.4
CMC4P56277 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CMC4P56277 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC17.55■□□□□ 0.4
CMC4P56277 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CMC4P56277 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CMC4P56277 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CMC4P56277 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC17.55■□□□□ 0.4
CMC4P56277 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC17.54■□□□□ 0.4
CMC4P56277 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CMC4P56277 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CMC4P56277 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
CMC4P56277 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC17.54■□□□□ 0.4
CMC4P56277 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
CMC4P56277 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
CMC4P56277 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
CMC4P56277 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CMC4P56277 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CMC4P56277 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
CMC4P56277 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC17.53■□□□□ 0.4
CMC4P56277 PVT1_1.1-201ENST00000615125 194 ntBASIC17.53■□□□□ 0.4
CMC4P56277 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
CMC4P56277 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
CMC4P56277 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
CMC4P56277 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CMC4P56277 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CMC4P56277 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CMC4P56277 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
CMC4P56277 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC17.52■□□□□ 0.4
CMC4P56277 THA1P-201ENST00000590384 1145 ntBASIC17.52■□□□□ 0.4
CMC4P56277 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC17.52■□□□□ 0.39
CMC4P56277 EXOC3-209ENST00000512944 2825 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
CMC4P56277 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
CMC4P56277 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CMC4P56277 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
CMC4P56277 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
CMC4P56277 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC17.51■□□□□ 0.39
CMC4P56277 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CMC4P56277 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC17.51■□□□□ 0.39
CMC4P56277 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC17.51■□□□□ 0.39
CMC4P56277 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC17.51■□□□□ 0.39
CMC4P56277 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC17.51■□□□□ 0.39
CMC4P56277 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CMC4P56277 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CMC4P56277 CEBPA-AS1-201ENST00000592982 2198 ntBASIC17.5■□□□□ 0.39
CMC4P56277 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
CMC4P56277 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC17.5■□□□□ 0.39
CMC4P56277 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
CMC4P56277 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC17.5■□□□□ 0.39
CMC4P56277 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
CMC4P56277 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
CMC4P56277 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CMC4P56277 KRT8P33-201ENST00000508125 1423 ntBASIC17.49■□□□□ 0.39
CMC4P56277 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC17.49■□□□□ 0.39
CMC4P56277 AL031848.2-201ENST00000607670 837 ntBASIC17.49■□□□□ 0.39
CMC4P56277 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC17.49■□□□□ 0.39
CMC4P56277 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC17.49■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 42.9 ms