Protein–RNA interactions for Protein: P49593

PPM1F, Protein phosphatase 1F, humanhuman

Predicted RBP Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPM1FP49593 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC23.12■■□□□ 1.29
PPM1FP49593 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
PPM1FP49593 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
PPM1FP49593 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC23.12■■□□□ 1.29
PPM1FP49593 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
PPM1FP49593 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC23.11■■□□□ 1.29
PPM1FP49593 AC022616.5-201ENST00000518796 181 ntBASIC23.11■■□□□ 1.29
PPM1FP49593 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
PPM1FP49593 AC131212.1-201ENST00000613771 668 ntBASIC23.11■■□□□ 1.29
PPM1FP49593 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC23.11■■□□□ 1.29
PPM1FP49593 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC23.11■■□□□ 1.29
PPM1FP49593 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC23.1■■□□□ 1.29
PPM1FP49593 PKM-203ENST00000389093 2279 ntTSL 5 BASIC23.1■■□□□ 1.29
PPM1FP49593 IHH-201ENST00000295731 2023 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
PPM1FP49593 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC23.1■■□□□ 1.29
PPM1FP49593 KRT125P-201ENST00000546827 989 ntBASIC23.1■■□□□ 1.29
PPM1FP49593 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
PPM1FP49593 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC23.09■■□□□ 1.29
PPM1FP49593 OR2A1-AS1-204ENST00000470435 602 ntBASIC23.09■■□□□ 1.29
PPM1FP49593 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC23.09■■□□□ 1.29
PPM1FP49593 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC23.09■■□□□ 1.29
PPM1FP49593 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC23.09■■□□□ 1.29
PPM1FP49593 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC23.09■■□□□ 1.29
PPM1FP49593 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
PPM1FP49593 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC23.08■■□□□ 1.29
PPM1FP49593 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC23.08■■□□□ 1.29
PPM1FP49593 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC23.08■■□□□ 1.29
PPM1FP49593 BX664725.1-201ENST00000438252 379 ntBASIC23.08■■□□□ 1.29
PPM1FP49593 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC23.08■■□□□ 1.28
PPM1FP49593 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC23.08■■□□□ 1.28
PPM1FP49593 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
PPM1FP49593 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC23.07■■□□□ 1.28
PPM1FP49593 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC23.07■■□□□ 1.28
PPM1FP49593 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
PPM1FP49593 SNAI3-AS1-204ENST00000567997 2048 ntBASIC23.07■■□□□ 1.28
PPM1FP49593 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
PPM1FP49593 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
PPM1FP49593 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
PPM1FP49593 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC23.06■■□□□ 1.28
PPM1FP49593 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
PPM1FP49593 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC23.06■■□□□ 1.28
PPM1FP49593 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
PPM1FP49593 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC23.06■■□□□ 1.28
PPM1FP49593 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC23.06■■□□□ 1.28
PPM1FP49593 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC23.06■■□□□ 1.28
PPM1FP49593 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC23.06■■□□□ 1.28
PPM1FP49593 TNIP2-201ENST00000315423 1974 ntAPPRIS P3 TSL 1 (best) BASIC23.05■■□□□ 1.28
PPM1FP49593 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
PPM1FP49593 GUSBP5-201ENST00000418136 578 ntBASIC23.05■■□□□ 1.28
PPM1FP49593 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC23.05■■□□□ 1.28
PPM1FP49593 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC23.05■■□□□ 1.28
PPM1FP49593 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
PPM1FP49593 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC23.04■■□□□ 1.28
PPM1FP49593 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC23.04■■□□□ 1.28
PPM1FP49593 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
PPM1FP49593 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC23.04■■□□□ 1.28
PPM1FP49593 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC23.04■■□□□ 1.28
PPM1FP49593 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC23.04■■□□□ 1.28
PPM1FP49593 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
PPM1FP49593 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
PPM1FP49593 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC23.03■■□□□ 1.28
PPM1FP49593 AL592295.1-201ENST00000400984 884 ntBASIC23.03■■□□□ 1.28
PPM1FP49593 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC23.03■■□□□ 1.28
PPM1FP49593 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
PPM1FP49593 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC23.03■■□□□ 1.28
PPM1FP49593 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
PPM1FP49593 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
PPM1FP49593 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC23.02■■□□□ 1.28
PPM1FP49593 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC23.02■■□□□ 1.28
PPM1FP49593 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC23.02■■□□□ 1.28
PPM1FP49593 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
PPM1FP49593 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC23.02■■□□□ 1.28
PPM1FP49593 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
PPM1FP49593 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
PPM1FP49593 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
PPM1FP49593 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
PPM1FP49593 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC23.01■■□□□ 1.27
PPM1FP49593 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
PPM1FP49593 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC23.01■■□□□ 1.27
PPM1FP49593 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC23.01■■□□□ 1.27
PPM1FP49593 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
PPM1FP49593 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC23■■□□□ 1.27
PPM1FP49593 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC23■■□□□ 1.27
PPM1FP49593 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
PPM1FP49593 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC23■■□□□ 1.27
PPM1FP49593 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC23■■□□□ 1.27
PPM1FP49593 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
PPM1FP49593 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC23■■□□□ 1.27
PPM1FP49593 AC120024.1-201ENST00000562672 995 ntBASIC23■■□□□ 1.27
PPM1FP49593 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC23■■□□□ 1.27
PPM1FP49593 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC23■■□□□ 1.27
PPM1FP49593 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC23■■□□□ 1.27
PPM1FP49593 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC23■■□□□ 1.27
PPM1FP49593 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC23■■□□□ 1.27
PPM1FP49593 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
PPM1FP49593 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC22.99■■□□□ 1.27
PPM1FP49593 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC22.99■■□□□ 1.27
PPM1FP49593 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC22.99■■□□□ 1.27
PPM1FP49593 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC22.99■■□□□ 1.27
PPM1FP49593 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
Retrieved 100 of 98,524 protein–RNA pairs in 22.8 ms