Protein–RNA interactions for Protein: P07339

CTSD, Cathepsin D, humanhuman

Predicted RBP Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSDP07339 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
CTSDP07339 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
CTSDP07339 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC19.57■□□□□ 0.72
CTSDP07339 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
CTSDP07339 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC19.57■□□□□ 0.72
CTSDP07339 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC19.57■□□□□ 0.72
CTSDP07339 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CTSDP07339 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CTSDP07339 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CTSDP07339 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC19.57■□□□□ 0.72
CTSDP07339 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC19.56■□□□□ 0.72
CTSDP07339 AC004812.2-201ENST00000611079 2094 ntBASIC19.56■□□□□ 0.72
CTSDP07339 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC19.56■□□□□ 0.72
CTSDP07339 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CTSDP07339 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
CTSDP07339 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC19.56■□□□□ 0.72
CTSDP07339 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC19.56■□□□□ 0.72
CTSDP07339 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC19.56■□□□□ 0.72
CTSDP07339 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
CTSDP07339 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC19.55■□□□□ 0.72
CTSDP07339 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
CTSDP07339 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
CTSDP07339 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC19.55■□□□□ 0.72
CTSDP07339 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CTSDP07339 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
CTSDP07339 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CTSDP07339 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CTSDP07339 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
CTSDP07339 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC19.54■□□□□ 0.72
CTSDP07339 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
CTSDP07339 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC19.54■□□□□ 0.72
CTSDP07339 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
CTSDP07339 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
CTSDP07339 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
CTSDP07339 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CTSDP07339 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC19.54■□□□□ 0.72
CTSDP07339 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CTSDP07339 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CTSDP07339 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
CTSDP07339 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC19.53■□□□□ 0.72
CTSDP07339 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
CTSDP07339 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
CTSDP07339 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC19.53■□□□□ 0.72
CTSDP07339 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CTSDP07339 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC19.52■□□□□ 0.72
CTSDP07339 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC19.52■□□□□ 0.72
CTSDP07339 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CTSDP07339 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CTSDP07339 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.71
CTSDP07339 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
CTSDP07339 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
CTSDP07339 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC19.52■□□□□ 0.71
CTSDP07339 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
CTSDP07339 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
CTSDP07339 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
CTSDP07339 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CTSDP07339 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC19.51■□□□□ 0.71
CTSDP07339 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
CTSDP07339 MED25-210ENST00000612854 801 ntTSL 5 BASIC19.51■□□□□ 0.71
CTSDP07339 MIR6089-201ENST00000616698 64 ntBASIC19.51■□□□□ 0.71
CTSDP07339 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
CTSDP07339 MED25-214ENST00000622402 642 ntTSL 5 BASIC19.51■□□□□ 0.71
CTSDP07339 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC19.51■□□□□ 0.71
CTSDP07339 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CTSDP07339 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
CTSDP07339 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CTSDP07339 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
CTSDP07339 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC19.5■□□□□ 0.71
CTSDP07339 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
CTSDP07339 HLA-V-202ENST00000446817 847 ntBASIC19.5■□□□□ 0.71
CTSDP07339 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC19.5■□□□□ 0.71
CTSDP07339 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CTSDP07339 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC19.49■□□□□ 0.71
CTSDP07339 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
CTSDP07339 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC19.49■□□□□ 0.71
CTSDP07339 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
CTSDP07339 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
CTSDP07339 LSR-205ENST00000427250 1606 ntTSL 2 BASIC19.48■□□□□ 0.71
CTSDP07339 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CTSDP07339 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
CTSDP07339 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC19.48■□□□□ 0.71
CTSDP07339 HGH1-207ENST00000628266 258 ntTSL 5 BASIC19.48■□□□□ 0.71
CTSDP07339 SHD-204ENST00000599689 1729 ntTSL 5 BASIC19.48■□□□□ 0.71
CTSDP07339 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CTSDP07339 ABCB10P4-201ENST00000566803 2184 ntBASIC19.47■□□□□ 0.71
CTSDP07339 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
CTSDP07339 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
CTSDP07339 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC19.47■□□□□ 0.71
CTSDP07339 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC19.47■□□□□ 0.71
CTSDP07339 AC126177.7-201ENST00000547904 679 ntBASIC19.47■□□□□ 0.71
CTSDP07339 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC19.47■□□□□ 0.71
CTSDP07339 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CTSDP07339 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
CTSDP07339 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
CTSDP07339 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
CTSDP07339 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
CTSDP07339 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
CTSDP07339 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
CTSDP07339 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CTSDP07339 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 203.6 ms