Protein–RNA interactions for Protein: O95238

SPDEF, SAM pointed domain-containing Ets transcription factor, humanhuman

Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPDEFO95238 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
SPDEFO95238 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
SPDEFO95238 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.76
SPDEFO95238 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.76
SPDEFO95238 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.76
SPDEFO95238 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC19.83■□□□□ 0.76
SPDEFO95238 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
SPDEFO95238 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
SPDEFO95238 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
SPDEFO95238 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
SPDEFO95238 HLA-V-202ENST00000446817 847 ntBASIC19.82■□□□□ 0.76
SPDEFO95238 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
SPDEFO95238 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC19.82■□□□□ 0.76
SPDEFO95238 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC19.82■□□□□ 0.76
SPDEFO95238 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
SPDEFO95238 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC19.81■□□□□ 0.76
SPDEFO95238 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC19.81■□□□□ 0.76
SPDEFO95238 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC19.81■□□□□ 0.76
SPDEFO95238 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC19.81■□□□□ 0.76
SPDEFO95238 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
SPDEFO95238 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC19.81■□□□□ 0.76
SPDEFO95238 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
SPDEFO95238 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC19.81■□□□□ 0.76
SPDEFO95238 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
SPDEFO95238 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
SPDEFO95238 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
SPDEFO95238 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC19.8■□□□□ 0.76
SPDEFO95238 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
SPDEFO95238 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
SPDEFO95238 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
SPDEFO95238 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC19.8■□□□□ 0.76
SPDEFO95238 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
SPDEFO95238 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
SPDEFO95238 AC016575.1-201ENST00000607026 382 ntBASIC19.8■□□□□ 0.76
SPDEFO95238 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
SPDEFO95238 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
SPDEFO95238 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
SPDEFO95238 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC19.8■□□□□ 0.76
SPDEFO95238 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
SPDEFO95238 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
SPDEFO95238 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC19.79■□□□□ 0.76
SPDEFO95238 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
SPDEFO95238 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
SPDEFO95238 DUSP8P5-201ENST00000422884 1815 ntBASIC19.79■□□□□ 0.76
SPDEFO95238 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC19.79■□□□□ 0.76
SPDEFO95238 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
SPDEFO95238 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
SPDEFO95238 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
SPDEFO95238 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
SPDEFO95238 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
SPDEFO95238 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
SPDEFO95238 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
SPDEFO95238 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
SPDEFO95238 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
SPDEFO95238 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
SPDEFO95238 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
SPDEFO95238 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
SPDEFO95238 AC142472.1-201ENST00000612013 1741 ntBASIC19.78■□□□□ 0.76
SPDEFO95238 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
SPDEFO95238 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
SPDEFO95238 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC19.78■□□□□ 0.76
SPDEFO95238 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
SPDEFO95238 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
SPDEFO95238 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC19.77■□□□□ 0.76
SPDEFO95238 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
SPDEFO95238 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
SPDEFO95238 ME2-208ENST00000638937 2471 ntTSL 5 BASIC19.77■□□□□ 0.76
SPDEFO95238 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.76
SPDEFO95238 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC19.77■□□□□ 0.76
SPDEFO95238 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
SPDEFO95238 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SPDEFO95238 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC19.76■□□□□ 0.75
SPDEFO95238 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SPDEFO95238 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC19.76■□□□□ 0.75
SPDEFO95238 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SPDEFO95238 AC126177.7-201ENST00000547904 679 ntBASIC19.76■□□□□ 0.75
SPDEFO95238 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SPDEFO95238 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
SPDEFO95238 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
SPDEFO95238 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
SPDEFO95238 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
SPDEFO95238 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
SPDEFO95238 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC19.75■□□□□ 0.75
SPDEFO95238 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
SPDEFO95238 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
SPDEFO95238 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC19.75■□□□□ 0.75
SPDEFO95238 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
SPDEFO95238 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC19.75■□□□□ 0.75
SPDEFO95238 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
SPDEFO95238 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SPDEFO95238 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SPDEFO95238 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SPDEFO95238 METRNL-202ENST00000570778 967 ntTSL 5 BASIC19.74■□□□□ 0.75
SPDEFO95238 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SPDEFO95238 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SPDEFO95238 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
SPDEFO95238 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC19.74■□□□□ 0.75
SPDEFO95238 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
SPDEFO95238 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
SPDEFO95238 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC19.74■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 21.8 ms