Protein–RNA interactions for Protein: O15239

NDUFA1, NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 1, humanhuman

Predictions only

Length 70 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA1O15239 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
NDUFA1O15239 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC16.06■□□□□ 0.16
NDUFA1O15239 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
NDUFA1O15239 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
NDUFA1O15239 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
NDUFA1O15239 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
NDUFA1O15239 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
NDUFA1O15239 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
NDUFA1O15239 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC16.06■□□□□ 0.16
NDUFA1O15239 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
NDUFA1O15239 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
NDUFA1O15239 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
NDUFA1O15239 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC16.05■□□□□ 0.16
NDUFA1O15239 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
NDUFA1O15239 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
NDUFA1O15239 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
NDUFA1O15239 AGPS-202ENST00000409888 815 ntTSL 4 BASIC16.05■□□□□ 0.16
NDUFA1O15239 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC16.05■□□□□ 0.16
NDUFA1O15239 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
NDUFA1O15239 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
NDUFA1O15239 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
NDUFA1O15239 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
NDUFA1O15239 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
NDUFA1O15239 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
NDUFA1O15239 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
NDUFA1O15239 HES6-205ENST00000409356 528 ntTSL 2 BASIC16.04■□□□□ 0.16
NDUFA1O15239 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC16.04■□□□□ 0.16
NDUFA1O15239 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
NDUFA1O15239 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC16.04■□□□□ 0.16
NDUFA1O15239 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC16.04■□□□□ 0.16
NDUFA1O15239 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
NDUFA1O15239 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
NDUFA1O15239 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
NDUFA1O15239 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
NDUFA1O15239 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
NDUFA1O15239 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
NDUFA1O15239 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
NDUFA1O15239 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC16.03■□□□□ 0.16
NDUFA1O15239 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC16.03■□□□□ 0.16
NDUFA1O15239 CHST11-203ENST00000547956 936 ntTSL 2 BASIC16.03■□□□□ 0.16
NDUFA1O15239 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC16.03■□□□□ 0.16
NDUFA1O15239 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
NDUFA1O15239 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC16.02■□□□□ 0.16
NDUFA1O15239 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
NDUFA1O15239 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
NDUFA1O15239 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
NDUFA1O15239 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
NDUFA1O15239 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC16.02■□□□□ 0.16
NDUFA1O15239 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC16.02■□□□□ 0.16
NDUFA1O15239 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
NDUFA1O15239 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC16.02■□□□□ 0.16
NDUFA1O15239 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC16.02■□□□□ 0.16
NDUFA1O15239 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
NDUFA1O15239 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
NDUFA1O15239 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
NDUFA1O15239 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
NDUFA1O15239 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.15
NDUFA1O15239 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
NDUFA1O15239 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
NDUFA1O15239 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC16.01■□□□□ 0.15
NDUFA1O15239 AL359258.2-201ENST00000564063 1566 ntBASIC16.01■□□□□ 0.15
NDUFA1O15239 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC16.01■□□□□ 0.15
NDUFA1O15239 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
NDUFA1O15239 ZNRF2P2-203ENST00000454624 420 ntBASIC16.01■□□□□ 0.15
NDUFA1O15239 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
NDUFA1O15239 AC126177.7-201ENST00000547904 679 ntBASIC16.01■□□□□ 0.15
NDUFA1O15239 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
NDUFA1O15239 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
NDUFA1O15239 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
NDUFA1O15239 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
NDUFA1O15239 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
NDUFA1O15239 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
NDUFA1O15239 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
NDUFA1O15239 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
NDUFA1O15239 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC16■□□□□ 0.15
NDUFA1O15239 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC16■□□□□ 0.15
NDUFA1O15239 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
NDUFA1O15239 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC16■□□□□ 0.15
NDUFA1O15239 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
NDUFA1O15239 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC15.99■□□□□ 0.15
NDUFA1O15239 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
NDUFA1O15239 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
NDUFA1O15239 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
NDUFA1O15239 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
NDUFA1O15239 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC15.99■□□□□ 0.15
NDUFA1O15239 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC15.99■□□□□ 0.15
NDUFA1O15239 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
NDUFA1O15239 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
NDUFA1O15239 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
NDUFA1O15239 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC15.99■□□□□ 0.15
NDUFA1O15239 RNF166-209ENST00000567844 633 ntTSL 5 BASIC15.99■□□□□ 0.15
NDUFA1O15239 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
NDUFA1O15239 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
NDUFA1O15239 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
NDUFA1O15239 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
NDUFA1O15239 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
NDUFA1O15239 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
NDUFA1O15239 CLDN5-201ENST00000403084 2357 ntBASIC15.98■□□□□ 0.15
NDUFA1O15239 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC15.98■□□□□ 0.15
NDUFA1O15239 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 16.7 ms