Protein–RNA interactions for Protein: A6NJ46

NKX6-3, Homeobox protein Nkx-6.3, humanhuman

Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-3A6NJ46 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC19.79■□□□□ 0.76
NKX6-3A6NJ46 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
NKX6-3A6NJ46 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
NKX6-3A6NJ46 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
NKX6-3A6NJ46 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
NKX6-3A6NJ46 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
NKX6-3A6NJ46 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
NKX6-3A6NJ46 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
NKX6-3A6NJ46 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
NKX6-3A6NJ46 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
NKX6-3A6NJ46 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
NKX6-3A6NJ46 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC19.78■□□□□ 0.76
NKX6-3A6NJ46 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
NKX6-3A6NJ46 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC19.77■□□□□ 0.76
NKX6-3A6NJ46 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC19.77■□□□□ 0.76
NKX6-3A6NJ46 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
NKX6-3A6NJ46 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC19.77■□□□□ 0.76
NKX6-3A6NJ46 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC19.77■□□□□ 0.76
NKX6-3A6NJ46 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC19.77■□□□□ 0.76
NKX6-3A6NJ46 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC19.76■□□□□ 0.75
NKX6-3A6NJ46 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
NKX6-3A6NJ46 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
NKX6-3A6NJ46 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
NKX6-3A6NJ46 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC19.76■□□□□ 0.75
NKX6-3A6NJ46 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
NKX6-3A6NJ46 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
NKX6-3A6NJ46 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
NKX6-3A6NJ46 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
NKX6-3A6NJ46 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
NKX6-3A6NJ46 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
NKX6-3A6NJ46 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC19.76■□□□□ 0.75
NKX6-3A6NJ46 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
NKX6-3A6NJ46 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
NKX6-3A6NJ46 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC19.75■□□□□ 0.75
NKX6-3A6NJ46 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
NKX6-3A6NJ46 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC19.75■□□□□ 0.75
NKX6-3A6NJ46 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC19.75■□□□□ 0.75
NKX6-3A6NJ46 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
NKX6-3A6NJ46 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
NKX6-3A6NJ46 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
NKX6-3A6NJ46 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC19.74■□□□□ 0.75
NKX6-3A6NJ46 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC19.74■□□□□ 0.75
NKX6-3A6NJ46 MTX2-204ENST00000443241 799 ntTSL 3 BASIC19.74■□□□□ 0.75
NKX6-3A6NJ46 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
NKX6-3A6NJ46 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
NKX6-3A6NJ46 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC19.73■□□□□ 0.75
NKX6-3A6NJ46 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
NKX6-3A6NJ46 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC19.73■□□□□ 0.75
NKX6-3A6NJ46 FOXO3B-201ENST00000395675 1928 ntBASIC19.73■□□□□ 0.75
NKX6-3A6NJ46 AL592295.1-201ENST00000400984 884 ntBASIC19.73■□□□□ 0.75
NKX6-3A6NJ46 LONRF2P2-201ENST00000439212 571 ntBASIC19.73■□□□□ 0.75
NKX6-3A6NJ46 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC19.73■□□□□ 0.75
NKX6-3A6NJ46 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
NKX6-3A6NJ46 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
NKX6-3A6NJ46 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
NKX6-3A6NJ46 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC19.72■□□□□ 0.75
NKX6-3A6NJ46 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
NKX6-3A6NJ46 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC19.72■□□□□ 0.75
NKX6-3A6NJ46 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
NKX6-3A6NJ46 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
NKX6-3A6NJ46 AC019171.1-201ENST00000601251 1056 ntBASIC19.72■□□□□ 0.75
NKX6-3A6NJ46 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
NKX6-3A6NJ46 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
NKX6-3A6NJ46 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
NKX6-3A6NJ46 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
NKX6-3A6NJ46 AC010980.1-201ENST00000587192 1142 ntBASIC19.71■□□□□ 0.75
NKX6-3A6NJ46 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
NKX6-3A6NJ46 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
NKX6-3A6NJ46 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
NKX6-3A6NJ46 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
NKX6-3A6NJ46 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC19.71■□□□□ 0.75
NKX6-3A6NJ46 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
NKX6-3A6NJ46 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
NKX6-3A6NJ46 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
NKX6-3A6NJ46 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC19.7■□□□□ 0.74
NKX6-3A6NJ46 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
NKX6-3A6NJ46 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
NKX6-3A6NJ46 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC19.7■□□□□ 0.74
NKX6-3A6NJ46 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
NKX6-3A6NJ46 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC19.7■□□□□ 0.74
NKX6-3A6NJ46 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
NKX6-3A6NJ46 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
NKX6-3A6NJ46 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
NKX6-3A6NJ46 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC19.69■□□□□ 0.74
NKX6-3A6NJ46 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
NKX6-3A6NJ46 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
NKX6-3A6NJ46 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC19.69■□□□□ 0.74
NKX6-3A6NJ46 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC19.69■□□□□ 0.74
NKX6-3A6NJ46 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
NKX6-3A6NJ46 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
NKX6-3A6NJ46 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
NKX6-3A6NJ46 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
NKX6-3A6NJ46 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
NKX6-3A6NJ46 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC19.69■□□□□ 0.74
NKX6-3A6NJ46 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
NKX6-3A6NJ46 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
NKX6-3A6NJ46 BEX3-202ENST00000372634 753 ntTSL 2 BASIC19.68■□□□□ 0.74
NKX6-3A6NJ46 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC19.68■□□□□ 0.74
NKX6-3A6NJ46 AC022616.5-201ENST00000518796 181 ntBASIC19.68■□□□□ 0.74
NKX6-3A6NJ46 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC19.68■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 21.2 ms