Protein–RNA interactions for Protein: A0A1B0GX49

TRBV6-4, T-cell receptor beta variable 6-4 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV6-4A0A1B0GX49 RARRES2P2-201ENST00000394842 485 ntBASIC16.63■□□□□ 0.25
TRBV6-4A0A1B0GX49 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
TRBV6-4A0A1B0GX49 AC018755.3-202ENST00000596210 929 ntBASIC16.63■□□□□ 0.25
TRBV6-4A0A1B0GX49 MIR6089-201ENST00000616698 64 ntBASIC16.63■□□□□ 0.25
TRBV6-4A0A1B0GX49 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC16.63■□□□□ 0.25
TRBV6-4A0A1B0GX49 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
TRBV6-4A0A1B0GX49 HYI-213ENST00000583037 1322 ntTSL 5 BASIC16.63■□□□□ 0.25
TRBV6-4A0A1B0GX49 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
TRBV6-4A0A1B0GX49 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC16.63■□□□□ 0.25
TRBV6-4A0A1B0GX49 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
TRBV6-4A0A1B0GX49 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
TRBV6-4A0A1B0GX49 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TRBV6-4A0A1B0GX49 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC16.63■□□□□ 0.25
TRBV6-4A0A1B0GX49 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC16.63■□□□□ 0.25
TRBV6-4A0A1B0GX49 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC16.63■□□□□ 0.25
TRBV6-4A0A1B0GX49 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TRBV6-4A0A1B0GX49 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC16.62■□□□□ 0.25
TRBV6-4A0A1B0GX49 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
TRBV6-4A0A1B0GX49 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC16.62■□□□□ 0.25
TRBV6-4A0A1B0GX49 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
TRBV6-4A0A1B0GX49 HSD17B1P1-201ENST00000590052 955 ntBASIC16.62■□□□□ 0.25
TRBV6-4A0A1B0GX49 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TRBV6-4A0A1B0GX49 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC16.62■□□□□ 0.25
TRBV6-4A0A1B0GX49 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TRBV6-4A0A1B0GX49 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TRBV6-4A0A1B0GX49 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC16.62■□□□□ 0.25
TRBV6-4A0A1B0GX49 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TRBV6-4A0A1B0GX49 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC16.62■□□□□ 0.25
TRBV6-4A0A1B0GX49 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC16.61■□□□□ 0.25
TRBV6-4A0A1B0GX49 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TRBV6-4A0A1B0GX49 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
TRBV6-4A0A1B0GX49 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
TRBV6-4A0A1B0GX49 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
TRBV6-4A0A1B0GX49 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TRBV6-4A0A1B0GX49 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC16.61■□□□□ 0.25
TRBV6-4A0A1B0GX49 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
TRBV6-4A0A1B0GX49 AC093323.1-202ENST00000635031 2045 ntBASIC16.61■□□□□ 0.25
TRBV6-4A0A1B0GX49 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TRBV6-4A0A1B0GX49 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC16.61■□□□□ 0.25
TRBV6-4A0A1B0GX49 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
TRBV6-4A0A1B0GX49 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TRBV6-4A0A1B0GX49 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
TRBV6-4A0A1B0GX49 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TRBV6-4A0A1B0GX49 FOXO3B-201ENST00000395675 1928 ntBASIC16.6■□□□□ 0.25
TRBV6-4A0A1B0GX49 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
TRBV6-4A0A1B0GX49 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
TRBV6-4A0A1B0GX49 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
TRBV6-4A0A1B0GX49 AL592293.1-201ENST00000502889 1188 ntBASIC16.6■□□□□ 0.25
TRBV6-4A0A1B0GX49 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC16.6■□□□□ 0.25
TRBV6-4A0A1B0GX49 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TRBV6-4A0A1B0GX49 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
TRBV6-4A0A1B0GX49 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
TRBV6-4A0A1B0GX49 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
TRBV6-4A0A1B0GX49 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
TRBV6-4A0A1B0GX49 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TRBV6-4A0A1B0GX49 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TRBV6-4A0A1B0GX49 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TRBV6-4A0A1B0GX49 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
TRBV6-4A0A1B0GX49 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TRBV6-4A0A1B0GX49 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
TRBV6-4A0A1B0GX49 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC16.59■□□□□ 0.25
TRBV6-4A0A1B0GX49 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
TRBV6-4A0A1B0GX49 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TRBV6-4A0A1B0GX49 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TRBV6-4A0A1B0GX49 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TRBV6-4A0A1B0GX49 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TRBV6-4A0A1B0GX49 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TRBV6-4A0A1B0GX49 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.25
TRBV6-4A0A1B0GX49 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
TRBV6-4A0A1B0GX49 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
TRBV6-4A0A1B0GX49 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
TRBV6-4A0A1B0GX49 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC16.58■□□□□ 0.24
TRBV6-4A0A1B0GX49 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
TRBV6-4A0A1B0GX49 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC16.58■□□□□ 0.24
TRBV6-4A0A1B0GX49 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
TRBV6-4A0A1B0GX49 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
TRBV6-4A0A1B0GX49 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
TRBV6-4A0A1B0GX49 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
TRBV6-4A0A1B0GX49 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
TRBV6-4A0A1B0GX49 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
TRBV6-4A0A1B0GX49 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
TRBV6-4A0A1B0GX49 IDNK-203ENST00000405990 629 ntTSL 2 BASIC16.57■□□□□ 0.24
TRBV6-4A0A1B0GX49 RPS2P7-201ENST00000447334 885 ntBASIC16.57■□□□□ 0.24
TRBV6-4A0A1B0GX49 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
TRBV6-4A0A1B0GX49 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
TRBV6-4A0A1B0GX49 LSR-205ENST00000427250 1606 ntTSL 2 BASIC16.56■□□□□ 0.24
TRBV6-4A0A1B0GX49 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC16.56■□□□□ 0.24
TRBV6-4A0A1B0GX49 AC141586.4-201ENST00000624558 1573 ntBASIC16.56■□□□□ 0.24
TRBV6-4A0A1B0GX49 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
TRBV6-4A0A1B0GX49 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC16.56■□□□□ 0.24
TRBV6-4A0A1B0GX49 MIR6765-201ENST00000614092 87 ntBASIC16.56■□□□□ 0.24
TRBV6-4A0A1B0GX49 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
TRBV6-4A0A1B0GX49 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC16.56■□□□□ 0.24
TRBV6-4A0A1B0GX49 PREB-202ENST00000406567 1910 ntTSL 5 BASIC16.56■□□□□ 0.24
TRBV6-4A0A1B0GX49 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
TRBV6-4A0A1B0GX49 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
TRBV6-4A0A1B0GX49 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
TRBV6-4A0A1B0GX49 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TRBV6-4A0A1B0GX49 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TRBV6-4A0A1B0GX49 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC16.55■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 51 ms