Protein–RNA interactions for Protein: Q9UFD9

RIMBP3, RIMS-binding protein 3A, humanhuman

Predictions only

Length 1,639 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIMBP3Q9UFD9 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC39.03■■■■□ 3.84
RIMBP3Q9UFD9 ABHD17AP1-201ENST00000358206 933 ntBASIC39.02■■■■□ 3.84
RIMBP3Q9UFD9 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC39.02■■■■□ 3.84
RIMBP3Q9UFD9 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC39.02■■■■□ 3.84
RIMBP3Q9UFD9 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC39.02■■■■□ 3.84
RIMBP3Q9UFD9 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC39.02■■■■□ 3.84
RIMBP3Q9UFD9 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC39.02■■■■□ 3.84
RIMBP3Q9UFD9 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC39.02■■■■□ 3.84
RIMBP3Q9UFD9 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC39.01■■■■□ 3.84
RIMBP3Q9UFD9 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC39.01■■■■□ 3.84
RIMBP3Q9UFD9 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC39.01■■■■□ 3.84
RIMBP3Q9UFD9 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC39■■■■□ 3.83
RIMBP3Q9UFD9 CA15P2-201ENST00000611168 834 ntBASIC39■■■■□ 3.83
RIMBP3Q9UFD9 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC39■■■■□ 3.83
RIMBP3Q9UFD9 SLC47A1P1-202ENST00000449666 945 ntBASIC39■■■■□ 3.83
RIMBP3Q9UFD9 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC39■■■■□ 3.83
RIMBP3Q9UFD9 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC38.99■■■■□ 3.83
RIMBP3Q9UFD9 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC38.99■■■■□ 3.83
RIMBP3Q9UFD9 KHDRBS3-201ENST00000355849 1977 ntAPPRIS P1 TSL 1 (best) BASIC38.98■■■■□ 3.83
RIMBP3Q9UFD9 JTB-203ENST00000368589 1216 ntTSL 2 BASIC38.98■■■■□ 3.83
RIMBP3Q9UFD9 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC38.98■■■■□ 3.83
RIMBP3Q9UFD9 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC38.98■■■■□ 3.83
RIMBP3Q9UFD9 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC38.96■■■■□ 3.83
RIMBP3Q9UFD9 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC38.96■■■■□ 3.83
RIMBP3Q9UFD9 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC38.96■■■■□ 3.83
RIMBP3Q9UFD9 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC38.96■■■■□ 3.83
RIMBP3Q9UFD9 AC034268.1-201ENST00000441047 882 ntBASIC38.96■■■■□ 3.83
RIMBP3Q9UFD9 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC38.96■■■■□ 3.83
RIMBP3Q9UFD9 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC38.96■■■■□ 3.83
RIMBP3Q9UFD9 TPRA1-209ENST00000489960 1903 ntAPPRIS P1 TSL 5 BASIC38.96■■■■□ 3.83
RIMBP3Q9UFD9 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC38.95■■■■□ 3.83
RIMBP3Q9UFD9 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC38.95■■■■□ 3.83
RIMBP3Q9UFD9 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC38.94■■■■□ 3.82
RIMBP3Q9UFD9 MAG-206ENST00000597035 542 ntTSL 4 BASIC38.94■■■■□ 3.82
RIMBP3Q9UFD9 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC38.93■■■■□ 3.82
RIMBP3Q9UFD9 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC38.92■■■■□ 3.82
RIMBP3Q9UFD9 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC38.92■■■■□ 3.82
RIMBP3Q9UFD9 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC38.92■■■■□ 3.82
RIMBP3Q9UFD9 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC38.92■■■■□ 3.82
RIMBP3Q9UFD9 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC38.91■■■■□ 3.82
RIMBP3Q9UFD9 HLA-L-209ENST00000420110 1011 ntBASIC38.91■■■■□ 3.82
RIMBP3Q9UFD9 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC38.91■■■■□ 3.82
RIMBP3Q9UFD9 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC38.91■■■■□ 3.82
RIMBP3Q9UFD9 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC38.91■■■■□ 3.82
RIMBP3Q9UFD9 RASA4CP-201ENST00000424092 1398 ntBASIC38.9■■■■□ 3.82
RIMBP3Q9UFD9 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC38.89■■■■□ 3.82
RIMBP3Q9UFD9 DLX3-202ENST00000512495 834 ntTSL 2 BASIC38.89■■■■□ 3.82
RIMBP3Q9UFD9 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC38.89■■■■□ 3.82
RIMBP3Q9UFD9 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC38.89■■■■□ 3.82
RIMBP3Q9UFD9 PANK2-207ENST00000610179 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC38.89■■■■□ 3.82
RIMBP3Q9UFD9 AC011551.1-201ENST00000614101 683 ntBASIC38.89■■■■□ 3.82
RIMBP3Q9UFD9 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC38.88■■■■□ 3.82
RIMBP3Q9UFD9 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC38.88■■■■□ 3.82
RIMBP3Q9UFD9 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC38.88■■■■□ 3.81
RIMBP3Q9UFD9 SRD5A1P1-201ENST00000442297 786 ntBASIC38.88■■■■□ 3.81
RIMBP3Q9UFD9 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC38.88■■■■□ 3.81
RIMBP3Q9UFD9 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC38.88■■■■□ 3.81
RIMBP3Q9UFD9 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC38.88■■■■□ 3.81
RIMBP3Q9UFD9 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC38.87■■■■□ 3.81
RIMBP3Q9UFD9 CLTA-206ENST00000466396 695 ntTSL 2 BASIC38.87■■■■□ 3.81
RIMBP3Q9UFD9 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC38.87■■■■□ 3.81
RIMBP3Q9UFD9 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC38.87■■■■□ 3.81
RIMBP3Q9UFD9 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC38.86■■■■□ 3.81
RIMBP3Q9UFD9 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC38.85■■■■□ 3.81
RIMBP3Q9UFD9 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC38.85■■■■□ 3.81
RIMBP3Q9UFD9 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC38.85■■■■□ 3.81
RIMBP3Q9UFD9 IRS3P-201ENST00000223076 1006 ntBASIC38.85■■■■□ 3.81
RIMBP3Q9UFD9 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC38.85■■■■□ 3.81
RIMBP3Q9UFD9 AC004911.1-201ENST00000416316 871 ntBASIC38.85■■■■□ 3.81
RIMBP3Q9UFD9 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC38.85■■■■□ 3.81
RIMBP3Q9UFD9 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC38.85■■■■□ 3.81
RIMBP3Q9UFD9 SF1-220ENST00000626028 704 ntTSL 2 BASIC38.85■■■■□ 3.81
RIMBP3Q9UFD9 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC38.84■■■■□ 3.81
RIMBP3Q9UFD9 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC38.83■■■■□ 3.81
RIMBP3Q9UFD9 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC38.83■■■■□ 3.81
RIMBP3Q9UFD9 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC38.82■■■■□ 3.81
RIMBP3Q9UFD9 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC38.82■■■■□ 3.81
RIMBP3Q9UFD9 RHOF-204ENST00000537265 699 ntTSL 2 BASIC38.82■■■■□ 3.81
RIMBP3Q9UFD9 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC38.82■■■■□ 3.81
RIMBP3Q9UFD9 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC38.82■■■■□ 3.81
RIMBP3Q9UFD9 SP2-202ENST00000613139 908 ntTSL 5 BASIC38.82■■■■□ 3.81
RIMBP3Q9UFD9 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC38.82■■■■□ 3.81
RIMBP3Q9UFD9 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC38.81■■■■□ 3.8
RIMBP3Q9UFD9 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC38.81■■■■□ 3.8
RIMBP3Q9UFD9 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC38.81■■■■□ 3.8
RIMBP3Q9UFD9 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC38.81■■■■□ 3.8
RIMBP3Q9UFD9 MIR4767-201ENST00000582827 78 ntBASIC38.81■■■■□ 3.8
RIMBP3Q9UFD9 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC38.8■■■■□ 3.8
RIMBP3Q9UFD9 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC38.8■■■■□ 3.8
RIMBP3Q9UFD9 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC38.8■■■■□ 3.8
RIMBP3Q9UFD9 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC38.8■■■■□ 3.8
RIMBP3Q9UFD9 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC38.8■■■■□ 3.8
RIMBP3Q9UFD9 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC38.79■■■■□ 3.8
RIMBP3Q9UFD9 AC027682.1-201ENST00000562846 899 ntBASIC38.79■■■■□ 3.8
RIMBP3Q9UFD9 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC38.79■■■■□ 3.8
RIMBP3Q9UFD9 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC38.79■■■■□ 3.8
RIMBP3Q9UFD9 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC38.78■■■■□ 3.8
RIMBP3Q9UFD9 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC38.78■■■■□ 3.8
RIMBP3Q9UFD9 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC38.78■■■■□ 3.8
RIMBP3Q9UFD9 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC38.78■■■■□ 3.8
Retrieved 100 of 98,524 protein–RNA pairs in 62.3 ms