Protein–RNA interactions for Protein: Q9HBD1

RC3H2, Roquin-2, humanhuman

Known RBP Predictions only

Length 1,191 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H2Q9HBD1 NALT1-201ENST00000429224 738 ntTSL 5 BASIC25.73■■□□□ 1.71
RC3H2Q9HBD1 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC25.73■■□□□ 1.71
RC3H2Q9HBD1 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC25.73■■□□□ 1.71
RC3H2Q9HBD1 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
RC3H2Q9HBD1 LRRC10B-201ENST00000378075 2219 ntAPPRIS P1 BASIC25.72■■□□□ 1.71
RC3H2Q9HBD1 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC25.72■■□□□ 1.71
RC3H2Q9HBD1 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC25.72■■□□□ 1.71
RC3H2Q9HBD1 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC25.72■■□□□ 1.71
RC3H2Q9HBD1 RALB-208ENST00000631312 311 ntTSL 5 BASIC25.72■■□□□ 1.71
RC3H2Q9HBD1 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC25.72■■□□□ 1.71
RC3H2Q9HBD1 AP004609.3-201ENST00000610705 1884 ntBASIC25.72■■□□□ 1.71
RC3H2Q9HBD1 LSM4-201ENST00000252816 986 ntTSL 2 BASIC25.71■■□□□ 1.71
RC3H2Q9HBD1 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC25.71■■□□□ 1.71
RC3H2Q9HBD1 AL136116.3-201ENST00000402907 1138 ntBASIC25.71■■□□□ 1.71
RC3H2Q9HBD1 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC25.71■■□□□ 1.71
RC3H2Q9HBD1 AC010997.5-201ENST00000609182 354 ntBASIC25.71■■□□□ 1.71
RC3H2Q9HBD1 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC25.71■■□□□ 1.71
RC3H2Q9HBD1 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
RC3H2Q9HBD1 LACTB-201ENST00000261893 1972 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
RC3H2Q9HBD1 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC25.7■■□□□ 1.7
RC3H2Q9HBD1 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC25.7■■□□□ 1.7
RC3H2Q9HBD1 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC25.7■■□□□ 1.7
RC3H2Q9HBD1 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC25.7■■□□□ 1.7
RC3H2Q9HBD1 MIR6724-1-201ENST00000616420 92 ntBASIC25.7■■□□□ 1.7
RC3H2Q9HBD1 MIR6724-2-201ENST00000616483 92 ntBASIC25.7■■□□□ 1.7
RC3H2Q9HBD1 MIR6724-4-201ENST00000617390 92 ntBASIC25.7■■□□□ 1.7
RC3H2Q9HBD1 MIR6724-3-201ENST00000622482 92 ntBASIC25.7■■□□□ 1.7
RC3H2Q9HBD1 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
RC3H2Q9HBD1 PQLC1-202ENST00000357575 2475 ntAPPRIS ALT1 TSL 5 BASIC25.69■■□□□ 1.7
RC3H2Q9HBD1 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC25.69■■□□□ 1.7
RC3H2Q9HBD1 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC25.69■■□□□ 1.7
RC3H2Q9HBD1 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC25.69■■□□□ 1.7
RC3H2Q9HBD1 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC25.69■■□□□ 1.7
RC3H2Q9HBD1 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC25.69■■□□□ 1.7
RC3H2Q9HBD1 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC25.69■■□□□ 1.7
RC3H2Q9HBD1 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC25.69■■□□□ 1.7
RC3H2Q9HBD1 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
RC3H2Q9HBD1 AC110285.6-201ENST00000617652 491 ntBASIC25.69■■□□□ 1.7
RC3H2Q9HBD1 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC25.69■■□□□ 1.7
RC3H2Q9HBD1 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC25.68■■□□□ 1.7
RC3H2Q9HBD1 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC25.68■■□□□ 1.7
RC3H2Q9HBD1 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC25.68■■□□□ 1.7
RC3H2Q9HBD1 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC25.68■■□□□ 1.7
RC3H2Q9HBD1 GAK-223ENST00000628912 497 ntTSL 5 BASIC25.68■■□□□ 1.7
RC3H2Q9HBD1 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC25.68■■□□□ 1.7
RC3H2Q9HBD1 SLC16A3-214ENST00000582743 2002 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
RC3H2Q9HBD1 MATK-201ENST00000310132 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC25.67■■□□□ 1.7
RC3H2Q9HBD1 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC25.66■■□□□ 1.7
RC3H2Q9HBD1 MTDHP2-201ENST00000601468 714 ntBASIC25.66■■□□□ 1.7
RC3H2Q9HBD1 FEV-201ENST00000295727 1879 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
RC3H2Q9HBD1 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC25.65■■□□□ 1.7
RC3H2Q9HBD1 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC25.65■■□□□ 1.7
RC3H2Q9HBD1 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC25.65■■□□□ 1.7
RC3H2Q9HBD1 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC25.65■■□□□ 1.7
RC3H2Q9HBD1 MIR4466-201ENST00000606121 54 ntBASIC25.65■■□□□ 1.7
RC3H2Q9HBD1 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC25.65■■□□□ 1.7
RC3H2Q9HBD1 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC25.64■■□□□ 1.7
RC3H2Q9HBD1 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC25.64■■□□□ 1.7
RC3H2Q9HBD1 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC25.64■■□□□ 1.69
RC3H2Q9HBD1 SERPING1-205ENST00000403558 2231 ntTSL 5 BASIC25.63■■□□□ 1.69
RC3H2Q9HBD1 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
RC3H2Q9HBD1 TK2-202ENST00000417693 1046 ntTSL 2 BASIC25.63■■□□□ 1.69
RC3H2Q9HBD1 AL512631.2-201ENST00000604634 923 ntBASIC25.63■■□□□ 1.69
RC3H2Q9HBD1 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC25.63■■□□□ 1.69
RC3H2Q9HBD1 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
RC3H2Q9HBD1 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC25.62■■□□□ 1.69
RC3H2Q9HBD1 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC25.62■■□□□ 1.69
RC3H2Q9HBD1 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
RC3H2Q9HBD1 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC25.62■■□□□ 1.69
RC3H2Q9HBD1 ACTR3B-201ENST00000256001 2216 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
RC3H2Q9HBD1 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC25.62■■□□□ 1.69
RC3H2Q9HBD1 EXOG-217ENST00000630638 197 ntTSL 5 BASIC25.62■■□□□ 1.69
RC3H2Q9HBD1 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC25.62■■□□□ 1.69
RC3H2Q9HBD1 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC25.61■■□□□ 1.69
RC3H2Q9HBD1 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC25.61■■□□□ 1.69
RC3H2Q9HBD1 MNX1-201ENST00000252971 2174 ntAPPRIS P3 TSL 1 (best) BASIC25.61■■□□□ 1.69
RC3H2Q9HBD1 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC25.61■■□□□ 1.69
RC3H2Q9HBD1 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC25.61■■□□□ 1.69
RC3H2Q9HBD1 QDPR-206ENST00000508623 601 ntTSL 3 BASIC25.61■■□□□ 1.69
RC3H2Q9HBD1 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC25.61■■□□□ 1.69
RC3H2Q9HBD1 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC25.61■■□□□ 1.69
RC3H2Q9HBD1 SNAI3-AS1-204ENST00000567997 2048 ntBASIC25.61■■□□□ 1.69
RC3H2Q9HBD1 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
RC3H2Q9HBD1 BCL3-201ENST00000164227 2038 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
RC3H2Q9HBD1 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC25.6■■□□□ 1.69
RC3H2Q9HBD1 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC25.6■■□□□ 1.69
RC3H2Q9HBD1 AF131216.4-201ENST00000638924 1588 ntBASIC25.6■■□□□ 1.69
RC3H2Q9HBD1 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
RC3H2Q9HBD1 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC25.59■■□□□ 1.69
RC3H2Q9HBD1 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC25.59■■□□□ 1.69
RC3H2Q9HBD1 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC25.59■■□□□ 1.69
RC3H2Q9HBD1 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC25.59■■□□□ 1.69
RC3H2Q9HBD1 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC25.59■■□□□ 1.69
RC3H2Q9HBD1 AL356740.2-201ENST00000601559 647 ntBASIC25.59■■□□□ 1.69
RC3H2Q9HBD1 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC25.58■■□□□ 1.69
RC3H2Q9HBD1 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC25.57■■□□□ 1.68
RC3H2Q9HBD1 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC25.57■■□□□ 1.68
RC3H2Q9HBD1 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC25.57■■□□□ 1.68
RC3H2Q9HBD1 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC25.57■■□□□ 1.68
RC3H2Q9HBD1 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC25.57■■□□□ 1.68
Retrieved 100 of 98,524 protein–RNA pairs in 136.1 ms