Protein–RNA interactions for Protein: Q9BY42

RTFDC1, Protein RTF2 homolog, humanhuman

Predicted RBP Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1Q9BY42 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC29.34■■■□□ 2.29
RTFDC1Q9BY42 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC29.34■■■□□ 2.29
RTFDC1Q9BY42 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC29.34■■■□□ 2.29
RTFDC1Q9BY42 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC29.34■■■□□ 2.29
RTFDC1Q9BY42 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC29.33■■■□□ 2.29
RTFDC1Q9BY42 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC29.32■■■□□ 2.28
RTFDC1Q9BY42 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC29.32■■■□□ 2.28
RTFDC1Q9BY42 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC29.32■■■□□ 2.28
RTFDC1Q9BY42 AC010997.5-201ENST00000609182 354 ntBASIC29.32■■■□□ 2.28
RTFDC1Q9BY42 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC29.32■■■□□ 2.28
RTFDC1Q9BY42 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC29.31■■■□□ 2.28
RTFDC1Q9BY42 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC29.31■■■□□ 2.28
RTFDC1Q9BY42 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC29.31■■■□□ 2.28
RTFDC1Q9BY42 AL136116.3-201ENST00000402907 1138 ntBASIC29.31■■■□□ 2.28
RTFDC1Q9BY42 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC29.31■■■□□ 2.28
RTFDC1Q9BY42 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC29.31■■■□□ 2.28
RTFDC1Q9BY42 TCF24-201ENST00000563496 2450 ntAPPRIS P1 TSL 5 BASIC29.31■■■□□ 2.28
RTFDC1Q9BY42 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC29.3■■■□□ 2.28
RTFDC1Q9BY42 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC29.3■■■□□ 2.28
RTFDC1Q9BY42 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC29.3■■■□□ 2.28
RTFDC1Q9BY42 MIR6724-1-201ENST00000616420 92 ntBASIC29.3■■■□□ 2.28
RTFDC1Q9BY42 MIR6724-2-201ENST00000616483 92 ntBASIC29.3■■■□□ 2.28
RTFDC1Q9BY42 MIR6724-4-201ENST00000617390 92 ntBASIC29.3■■■□□ 2.28
RTFDC1Q9BY42 MIR6724-3-201ENST00000622482 92 ntBASIC29.3■■■□□ 2.28
RTFDC1Q9BY42 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC29.3■■■□□ 2.28
RTFDC1Q9BY42 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC29.29■■■□□ 2.28
RTFDC1Q9BY42 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC29.29■■■□□ 2.28
RTFDC1Q9BY42 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC29.29■■■□□ 2.28
RTFDC1Q9BY42 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC29.29■■■□□ 2.28
RTFDC1Q9BY42 SENP5-202ENST00000419026 973 ntTSL 3 BASIC29.29■■■□□ 2.28
RTFDC1Q9BY42 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC29.29■■■□□ 2.28
RTFDC1Q9BY42 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC29.29■■■□□ 2.28
RTFDC1Q9BY42 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC29.29■■■□□ 2.28
RTFDC1Q9BY42 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC29.29■■■□□ 2.28
RTFDC1Q9BY42 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC29.28■■■□□ 2.28
RTFDC1Q9BY42 LSM4-201ENST00000252816 986 ntTSL 2 BASIC29.28■■■□□ 2.28
RTFDC1Q9BY42 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC29.28■■■□□ 2.28
RTFDC1Q9BY42 AC011551.1-201ENST00000614101 683 ntBASIC29.28■■■□□ 2.28
RTFDC1Q9BY42 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC29.28■■■□□ 2.28
RTFDC1Q9BY42 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC29.28■■■□□ 2.28
RTFDC1Q9BY42 EXOC3L4-201ENST00000380069 2293 ntAPPRIS P1 TSL 1 (best) BASIC29.28■■■□□ 2.28
RTFDC1Q9BY42 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC29.27■■■□□ 2.28
RTFDC1Q9BY42 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC29.27■■■□□ 2.28
RTFDC1Q9BY42 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC29.27■■■□□ 2.28
RTFDC1Q9BY42 AC110285.6-201ENST00000617652 491 ntBASIC29.27■■■□□ 2.28
RTFDC1Q9BY42 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC29.27■■■□□ 2.28
RTFDC1Q9BY42 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC29.27■■■□□ 2.28
RTFDC1Q9BY42 MAPKAPK2-201ENST00000294981 2171 ntTSL 1 (best) BASIC29.26■■■□□ 2.28
RTFDC1Q9BY42 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC29.26■■■□□ 2.27
RTFDC1Q9BY42 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC29.26■■■□□ 2.27
RTFDC1Q9BY42 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC29.26■■■□□ 2.27
RTFDC1Q9BY42 HYAL2-202ENST00000395139 2136 ntAPPRIS P1 TSL 1 (best) BASIC29.26■■■□□ 2.27
RTFDC1Q9BY42 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC29.25■■■□□ 2.27
RTFDC1Q9BY42 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC29.25■■■□□ 2.27
RTFDC1Q9BY42 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC29.25■■■□□ 2.27
RTFDC1Q9BY42 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC29.24■■■□□ 2.27
RTFDC1Q9BY42 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC29.24■■■□□ 2.27
RTFDC1Q9BY42 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC29.24■■■□□ 2.27
RTFDC1Q9BY42 AC142086.6-201ENST00000621154 1765 ntBASIC29.24■■■□□ 2.27
RTFDC1Q9BY42 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC29.23■■■□□ 2.27
RTFDC1Q9BY42 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC29.23■■■□□ 2.27
RTFDC1Q9BY42 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC29.23■■■□□ 2.27
RTFDC1Q9BY42 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC29.23■■■□□ 2.27
RTFDC1Q9BY42 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC29.23■■■□□ 2.27
RTFDC1Q9BY42 GAK-223ENST00000628912 497 ntTSL 5 BASIC29.23■■■□□ 2.27
RTFDC1Q9BY42 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC29.23■■■□□ 2.27
RTFDC1Q9BY42 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC29.23■■■□□ 2.27
RTFDC1Q9BY42 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC29.23■■■□□ 2.27
RTFDC1Q9BY42 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC29.23■■■□□ 2.27
RTFDC1Q9BY42 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC29.22■■■□□ 2.27
RTFDC1Q9BY42 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC29.22■■■□□ 2.27
RTFDC1Q9BY42 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC29.22■■■□□ 2.27
RTFDC1Q9BY42 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC29.22■■■□□ 2.27
RTFDC1Q9BY42 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC29.22■■■□□ 2.27
RTFDC1Q9BY42 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC29.22■■■□□ 2.27
RTFDC1Q9BY42 MTDHP2-201ENST00000601468 714 ntBASIC29.22■■■□□ 2.27
RTFDC1Q9BY42 MIR4466-201ENST00000606121 54 ntBASIC29.22■■■□□ 2.27
RTFDC1Q9BY42 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC29.22■■■□□ 2.27
RTFDC1Q9BY42 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC29.21■■■□□ 2.27
RTFDC1Q9BY42 SHF-206ENST00000560471 2499 ntTSL 5 BASIC29.21■■■□□ 2.27
RTFDC1Q9BY42 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC29.21■■■□□ 2.27
RTFDC1Q9BY42 EXOG-217ENST00000630638 197 ntTSL 5 BASIC29.21■■■□□ 2.27
RTFDC1Q9BY42 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC29.21■■■□□ 2.27
RTFDC1Q9BY42 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC29.2■■■□□ 2.27
RTFDC1Q9BY42 TK2-202ENST00000417693 1046 ntTSL 2 BASIC29.2■■■□□ 2.26
RTFDC1Q9BY42 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC29.2■■■□□ 2.26
RTFDC1Q9BY42 AL356740.2-201ENST00000601559 647 ntBASIC29.2■■■□□ 2.26
RTFDC1Q9BY42 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC29.2■■■□□ 2.26
RTFDC1Q9BY42 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC29.19■■■□□ 2.26
RTFDC1Q9BY42 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC29.18■■■□□ 2.26
RTFDC1Q9BY42 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC29.18■■■□□ 2.26
RTFDC1Q9BY42 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC29.18■■■□□ 2.26
RTFDC1Q9BY42 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC29.18■■■□□ 2.26
RTFDC1Q9BY42 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC29.18■■■□□ 2.26
RTFDC1Q9BY42 AL512631.2-201ENST00000604634 923 ntBASIC29.18■■■□□ 2.26
RTFDC1Q9BY42 AC005837.3-201ENST00000612163 286 ntBASIC29.18■■■□□ 2.26
RTFDC1Q9BY42 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC29.18■■■□□ 2.26
RTFDC1Q9BY42 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC29.18■■■□□ 2.26
RTFDC1Q9BY42 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC29.17■■■□□ 2.26
RTFDC1Q9BY42 AP004609.3-201ENST00000610705 1884 ntBASIC29.17■■■□□ 2.26
Retrieved 100 of 98,524 protein–RNA pairs in 35.9 ms