Protein–RNA interactions for Protein: Q99758

ABCA3, ATP-binding cassette sub-family A member 3, humanhuman

Predictions only

Length 1,704 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3Q99758 FTCD-201ENST00000291670 1905 ntAPPRIS P1 TSL 1 (best) BASIC32.4■■■□□ 2.78
ABCA3Q99758 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC32.4■■■□□ 2.78
ABCA3Q99758 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC32.39■■■□□ 2.78
ABCA3Q99758 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC32.39■■■□□ 2.78
ABCA3Q99758 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC32.39■■■□□ 2.78
ABCA3Q99758 AC104564.3-201ENST00000582367 638 ntBASIC32.39■■■□□ 2.78
ABCA3Q99758 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC32.38■■■□□ 2.77
ABCA3Q99758 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC32.38■■■□□ 2.77
ABCA3Q99758 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC32.38■■■□□ 2.77
ABCA3Q99758 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC32.38■■■□□ 2.77
ABCA3Q99758 AC135279.3-201ENST00000610945 1311 ntBASIC32.38■■■□□ 2.77
ABCA3Q99758 TFPT-201ENST00000391757 774 ntTSL 5 BASIC32.37■■■□□ 2.77
ABCA3Q99758 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC32.37■■■□□ 2.77
ABCA3Q99758 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC32.37■■■□□ 2.77
ABCA3Q99758 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC32.37■■■□□ 2.77
ABCA3Q99758 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC32.37■■■□□ 2.77
ABCA3Q99758 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC32.37■■■□□ 2.77
ABCA3Q99758 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC32.37■■■□□ 2.77
ABCA3Q99758 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC32.37■■■□□ 2.77
ABCA3Q99758 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC32.37■■■□□ 2.77
ABCA3Q99758 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC32.37■■■□□ 2.77
ABCA3Q99758 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC32.37■■■□□ 2.77
ABCA3Q99758 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC32.37■■■□□ 2.77
ABCA3Q99758 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC32.36■■■□□ 2.77
ABCA3Q99758 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC32.36■■■□□ 2.77
ABCA3Q99758 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC32.36■■■□□ 2.77
ABCA3Q99758 AF131216.4-201ENST00000638924 1588 ntBASIC32.36■■■□□ 2.77
ABCA3Q99758 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC32.35■■■□□ 2.77
ABCA3Q99758 TFEB-204ENST00000373033 2331 ntAPPRIS P1 TSL 1 (best) BASIC32.35■■■□□ 2.77
ABCA3Q99758 SIRT3-201ENST00000382743 2543 ntAPPRIS P2 TSL 1 (best) BASIC32.35■■■□□ 2.77
ABCA3Q99758 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC32.34■■■□□ 2.77
ABCA3Q99758 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC32.34■■■□□ 2.77
ABCA3Q99758 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC32.34■■■□□ 2.77
ABCA3Q99758 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC32.34■■■□□ 2.77
ABCA3Q99758 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC32.34■■■□□ 2.77
ABCA3Q99758 GAK-223ENST00000628912 497 ntTSL 5 BASIC32.34■■■□□ 2.77
ABCA3Q99758 WTAP-206ENST00000621533 2109 ntAPPRIS P1 TSL 2 BASIC32.33■■■□□ 2.77
ABCA3Q99758 CUL4A-202ENST00000375440 2364 ntAPPRIS P1 TSL 1 (best) BASIC32.33■■■□□ 2.77
ABCA3Q99758 GIPC1-203ENST00000393033 1926 ntAPPRIS P1 TSL 1 (best) BASIC32.33■■■□□ 2.77
ABCA3Q99758 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC32.32■■■□□ 2.76
ABCA3Q99758 POU3F1-201ENST00000373012 2184 ntAPPRIS P1 BASIC32.32■■■□□ 2.76
ABCA3Q99758 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC32.31■■■□□ 2.76
ABCA3Q99758 AC142472.1-201ENST00000612013 1741 ntBASIC32.31■■■□□ 2.76
ABCA3Q99758 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC32.31■■■□□ 2.76
ABCA3Q99758 SNX5-217ENST00000606557 1087 ntBASIC32.3■■■□□ 2.76
ABCA3Q99758 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC32.3■■■□□ 2.76
ABCA3Q99758 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC32.3■■■□□ 2.76
ABCA3Q99758 LFNG-201ENST00000222725 2377 ntAPPRIS P4 TSL 5 BASIC32.3■■■□□ 2.76
ABCA3Q99758 PXDC1-202ENST00000380283 2190 ntAPPRIS P1 TSL 1 (best) BASIC32.29■■■□□ 2.76
ABCA3Q99758 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC32.29■■■□□ 2.76
ABCA3Q99758 AGFG1-205ENST00000409979 2089 ntAPPRIS ALT1 TSL 5 BASIC32.29■■■□□ 2.76
ABCA3Q99758 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC32.29■■■□□ 2.76
ABCA3Q99758 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC32.29■■■□□ 2.76
ABCA3Q99758 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC32.29■■■□□ 2.76
ABCA3Q99758 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC32.28■■■□□ 2.76
ABCA3Q99758 BX255925.1-201ENST00000566954 1854 ntBASIC32.28■■■□□ 2.76
ABCA3Q99758 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC32.28■■■□□ 2.76
ABCA3Q99758 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC32.28■■■□□ 2.76
ABCA3Q99758 CLTA-210ENST00000540080 989 ntTSL 2 BASIC32.28■■■□□ 2.76
ABCA3Q99758 AC092666.2-201ENST00000613287 246 ntBASIC32.28■■■□□ 2.76
ABCA3Q99758 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC32.27■■■□□ 2.76
ABCA3Q99758 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC32.27■■■□□ 2.76
ABCA3Q99758 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC32.27■■■□□ 2.76
ABCA3Q99758 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC32.26■■■□□ 2.76
ABCA3Q99758 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC32.26■■■□□ 2.76
ABCA3Q99758 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC32.26■■■□□ 2.75
ABCA3Q99758 AC142381.2-201ENST00000566120 298 ntBASIC32.26■■■□□ 2.75
ABCA3Q99758 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC32.26■■■□□ 2.75
ABCA3Q99758 GNAI2-202ENST00000313601 2464 ntAPPRIS P1 TSL 1 (best) BASIC32.25■■■□□ 2.75
ABCA3Q99758 KANSL1L-207ENST00000452086 2334 ntTSL 1 (best) BASIC32.25■■■□□ 2.75
ABCA3Q99758 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC32.25■■■□□ 2.75
ABCA3Q99758 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC32.25■■■□□ 2.75
ABCA3Q99758 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC32.25■■■□□ 2.75
ABCA3Q99758 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC32.24■■■□□ 2.75
ABCA3Q99758 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC32.23■■■□□ 2.75
ABCA3Q99758 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC32.23■■■□□ 2.75
ABCA3Q99758 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC32.23■■■□□ 2.75
ABCA3Q99758 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC32.23■■■□□ 2.75
ABCA3Q99758 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC32.22■■■□□ 2.75
ABCA3Q99758 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC32.22■■■□□ 2.75
ABCA3Q99758 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC32.22■■■□□ 2.75
ABCA3Q99758 DRD5P2-201ENST00000421395 2012 ntBASIC32.22■■■□□ 2.75
ABCA3Q99758 HOMER2-202ENST00000450735 1950 ntAPPRIS ALT2 TSL 1 (best) BASIC32.21■■■□□ 2.75
ABCA3Q99758 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC32.21■■■□□ 2.75
ABCA3Q99758 CLTA-206ENST00000466396 695 ntTSL 2 BASIC32.21■■■□□ 2.75
ABCA3Q99758 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC32.21■■■□□ 2.75
ABCA3Q99758 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC32.21■■■□□ 2.75
ABCA3Q99758 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC32.21■■■□□ 2.75
ABCA3Q99758 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC32.21■■■□□ 2.75
ABCA3Q99758 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC32.21■■■□□ 2.75
ABCA3Q99758 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC32.21■■■□□ 2.75
ABCA3Q99758 ADRA1D-201ENST00000379453 2728 ntAPPRIS P1 TSL 1 (best) BASIC32.21■■■□□ 2.75
ABCA3Q99758 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC32.2■■■□□ 2.75
ABCA3Q99758 ZDHHC23-206ENST00000498275 2055 ntAPPRIS ALT2 TSL 2 BASIC32.2■■■□□ 2.75
ABCA3Q99758 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC32.2■■■□□ 2.74
ABCA3Q99758 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC32.2■■■□□ 2.74
ABCA3Q99758 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC32.19■■■□□ 2.74
ABCA3Q99758 LINC01003-201ENST00000564834 1764 ntBASIC32.19■■■□□ 2.74
ABCA3Q99758 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC32.18■■■□□ 2.74
ABCA3Q99758 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC32.18■■■□□ 2.74
Retrieved 100 of 98,524 protein–RNA pairs in 41.2 ms