Protein–RNA interactions for Protein: Q92902

HPS1, Hermansky-Pudlak syndrome 1 protein, humanhuman

Predictions only

Length 700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1Q92902 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
HPS1Q92902 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC21.37■■□□□ 1.01
HPS1Q92902 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
HPS1Q92902 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC21.36■■□□□ 1.01
HPS1Q92902 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC21.36■■□□□ 1.01
HPS1Q92902 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
HPS1Q92902 HES4-202ENST00000428771 1040 ntTSL 2 BASIC21.36■■□□□ 1.01
HPS1Q92902 ABHD17AP5-201ENST00000580133 923 ntBASIC21.36■■□□□ 1.01
HPS1Q92902 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
HPS1Q92902 AC142381.3-201ENST00000568208 1670 ntBASIC21.36■■□□□ 1.01
HPS1Q92902 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
HPS1Q92902 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
HPS1Q92902 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
HPS1Q92902 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
HPS1Q92902 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
HPS1Q92902 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC21.35■■□□□ 1.01
HPS1Q92902 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
HPS1Q92902 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
HPS1Q92902 CEP120-209ENST00000515110 606 ntTSL 3 BASIC21.35■■□□□ 1.01
HPS1Q92902 RPS2-210ENST00000530225 765 ntTSL 2 BASIC21.35■■□□□ 1.01
HPS1Q92902 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC21.35■■□□□ 1.01
HPS1Q92902 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
HPS1Q92902 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
HPS1Q92902 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC21.34■■□□□ 1.01
HPS1Q92902 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC21.34■■□□□ 1.01
HPS1Q92902 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
HPS1Q92902 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC21.34■■□□□ 1.01
HPS1Q92902 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC21.34■■□□□ 1.01
HPS1Q92902 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
HPS1Q92902 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC21.33■■□□□ 1.01
HPS1Q92902 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1.01
HPS1Q92902 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
HPS1Q92902 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
HPS1Q92902 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
HPS1Q92902 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
HPS1Q92902 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
HPS1Q92902 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
HPS1Q92902 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC21.33■■□□□ 1.01
HPS1Q92902 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
HPS1Q92902 PEX7-203ENST00000541292 945 ntTSL 5 BASIC21.33■■□□□ 1.01
HPS1Q92902 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
HPS1Q92902 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC21.33■■□□□ 1
HPS1Q92902 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
HPS1Q92902 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC21.32■■□□□ 1
HPS1Q92902 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
HPS1Q92902 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
HPS1Q92902 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
HPS1Q92902 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
HPS1Q92902 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
HPS1Q92902 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
HPS1Q92902 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC21.31■■□□□ 1
HPS1Q92902 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
HPS1Q92902 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC21.31■■□□□ 1
HPS1Q92902 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
HPS1Q92902 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC21.31■■□□□ 1
HPS1Q92902 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
HPS1Q92902 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC21.3■■□□□ 1
HPS1Q92902 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
HPS1Q92902 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC21.3■■□□□ 1
HPS1Q92902 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
HPS1Q92902 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
HPS1Q92902 AC022413.1-201ENST00000624602 984 ntBASIC21.3■■□□□ 1
HPS1Q92902 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
HPS1Q92902 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC21.3■■□□□ 1
HPS1Q92902 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC21.3■■□□□ 1
HPS1Q92902 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC21.3■■□□□ 1
HPS1Q92902 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
HPS1Q92902 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC21.3■■□□□ 1
HPS1Q92902 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
HPS1Q92902 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC21.29■■□□□ 1
HPS1Q92902 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC21.29■■□□□ 1
HPS1Q92902 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC21.29■■□□□ 1
HPS1Q92902 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC21.28■■□□□ 1
HPS1Q92902 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC21.28■■□□□ 1
HPS1Q92902 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC21.28■■□□□ 1
HPS1Q92902 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
HPS1Q92902 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC21.28■■□□□ 1
HPS1Q92902 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC21.28■■□□□ 1
HPS1Q92902 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC21.28■■□□□ 1
HPS1Q92902 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC21.28■■□□□ 1
HPS1Q92902 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC21.28■■□□□ 1
HPS1Q92902 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
HPS1Q92902 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
HPS1Q92902 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
HPS1Q92902 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC21.27■■□□□ 1
HPS1Q92902 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
HPS1Q92902 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC21.27■■□□□ 1
HPS1Q92902 CHST11-203ENST00000547956 936 ntTSL 2 BASIC21.27■■□□□ 1
HPS1Q92902 AC148477.6-201ENST00000623746 465 ntBASIC21.27■■□□□ 1
HPS1Q92902 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC21.27■■□□□ 1
HPS1Q92902 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC21.27■■□□□ 1
HPS1Q92902 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
HPS1Q92902 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
HPS1Q92902 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
HPS1Q92902 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC21.26■□□□□ 0.99
HPS1Q92902 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC21.26■□□□□ 0.99
HPS1Q92902 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
HPS1Q92902 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC21.25■□□□□ 0.99
HPS1Q92902 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
HPS1Q92902 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC21.24■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms