Protein–RNA interactions for Protein: Q8N139

ABCA6, ATP-binding cassette sub-family A member 6, humanhuman

Predictions only

Length 1,617 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA6Q8N139 KANSL1L-207ENST00000452086 2334 ntTSL 1 (best) BASIC35.97■■■■□ 3.35
ABCA6Q8N139 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC35.97■■■■□ 3.35
ABCA6Q8N139 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC35.97■■■■□ 3.35
ABCA6Q8N139 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC35.97■■■■□ 3.35
ABCA6Q8N139 AK3-203ENST00000447596 705 ntTSL 2 BASIC35.96■■■■□ 3.35
ABCA6Q8N139 AL031432.3-201ENST00000607698 485 ntBASIC35.96■■■■□ 3.35
ABCA6Q8N139 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC35.96■■■■□ 3.35
ABCA6Q8N139 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC35.96■■■■□ 3.35
ABCA6Q8N139 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC35.95■■■■□ 3.35
ABCA6Q8N139 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC35.95■■■■□ 3.35
ABCA6Q8N139 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC35.95■■■■□ 3.35
ABCA6Q8N139 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC35.95■■■■□ 3.35
ABCA6Q8N139 PXDC1-202ENST00000380283 2190 ntAPPRIS P1 TSL 1 (best) BASIC35.94■■■■□ 3.34
ABCA6Q8N139 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC35.94■■■■□ 3.34
ABCA6Q8N139 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC35.94■■■■□ 3.34
ABCA6Q8N139 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC35.94■■■■□ 3.34
ABCA6Q8N139 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC35.94■■■■□ 3.34
ABCA6Q8N139 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC35.94■■■■□ 3.34
ABCA6Q8N139 AC106739.1-201ENST00000617035 715 ntBASIC35.94■■■■□ 3.34
ABCA6Q8N139 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC35.93■■■■□ 3.34
ABCA6Q8N139 GAK-223ENST00000628912 497 ntTSL 5 BASIC35.93■■■■□ 3.34
ABCA6Q8N139 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC35.92■■■■□ 3.34
ABCA6Q8N139 TK2-202ENST00000417693 1046 ntTSL 2 BASIC35.92■■■■□ 3.34
ABCA6Q8N139 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC35.92■■■■□ 3.34
ABCA6Q8N139 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC35.92■■■■□ 3.34
ABCA6Q8N139 BX255925.1-201ENST00000566954 1854 ntBASIC35.92■■■■□ 3.34
ABCA6Q8N139 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC35.91■■■■□ 3.34
ABCA6Q8N139 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC35.9■■■■□ 3.34
ABCA6Q8N139 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC35.9■■■■□ 3.34
ABCA6Q8N139 AF131216.4-201ENST00000638924 1588 ntBASIC35.9■■■■□ 3.34
ABCA6Q8N139 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC35.9■■■■□ 3.34
ABCA6Q8N139 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC35.9■■■■□ 3.34
ABCA6Q8N139 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC35.9■■■■□ 3.34
ABCA6Q8N139 ARMC10-211ENST00000541300 2266 ntTSL 1 (best) BASIC35.9■■■■□ 3.34
ABCA6Q8N139 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC35.89■■■■□ 3.34
ABCA6Q8N139 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC35.89■■■■□ 3.34
ABCA6Q8N139 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC35.89■■■■□ 3.34
ABCA6Q8N139 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC35.88■■■■□ 3.33
ABCA6Q8N139 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC35.88■■■■□ 3.33
ABCA6Q8N139 SUDS3P1-201ENST00000505831 966 ntBASIC35.88■■■■□ 3.33
ABCA6Q8N139 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC35.88■■■■□ 3.33
ABCA6Q8N139 AC142472.1-201ENST00000612013 1741 ntBASIC35.87■■■■□ 3.33
ABCA6Q8N139 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC35.87■■■■□ 3.33
ABCA6Q8N139 ZDHHC23-206ENST00000498275 2055 ntAPPRIS ALT2 TSL 2 BASIC35.87■■■■□ 3.33
ABCA6Q8N139 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC35.86■■■■□ 3.33
ABCA6Q8N139 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC35.86■■■■□ 3.33
ABCA6Q8N139 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC35.86■■■■□ 3.33
ABCA6Q8N139 ST7-205ENST00000393446 2114 ntTSL 5 BASIC35.86■■■■□ 3.33
ABCA6Q8N139 TFPT-201ENST00000391757 774 ntTSL 5 BASIC35.86■■■■□ 3.33
ABCA6Q8N139 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC35.86■■■■□ 3.33
ABCA6Q8N139 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC35.86■■■■□ 3.33
ABCA6Q8N139 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC35.86■■■■□ 3.33
ABCA6Q8N139 AC135279.3-201ENST00000610945 1311 ntBASIC35.86■■■■□ 3.33
ABCA6Q8N139 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC35.85■■■■□ 3.33
ABCA6Q8N139 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC35.85■■■■□ 3.33
ABCA6Q8N139 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC35.85■■■■□ 3.33
ABCA6Q8N139 LGR4-203ENST00000480977 492 ntTSL 2 BASIC35.85■■■■□ 3.33
ABCA6Q8N139 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC35.85■■■■□ 3.33
ABCA6Q8N139 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC35.85■■■■□ 3.33
ABCA6Q8N139 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC35.84■■■■□ 3.33
ABCA6Q8N139 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC35.84■■■■□ 3.33
ABCA6Q8N139 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC35.84■■■■□ 3.33
ABCA6Q8N139 CLTA-210ENST00000540080 989 ntTSL 2 BASIC35.84■■■■□ 3.33
ABCA6Q8N139 AC092666.2-201ENST00000613287 246 ntBASIC35.84■■■■□ 3.33
ABCA6Q8N139 ABCB10P1-201ENST00000614297 2181 ntBASIC35.84■■■■□ 3.33
ABCA6Q8N139 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC35.84■■■■□ 3.33
ABCA6Q8N139 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC35.83■■■■□ 3.33
ABCA6Q8N139 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC35.83■■■■□ 3.33
ABCA6Q8N139 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC35.83■■■■□ 3.33
ABCA6Q8N139 HOMER2-202ENST00000450735 1950 ntAPPRIS ALT2 TSL 1 (best) BASIC35.83■■■■□ 3.33
ABCA6Q8N139 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC35.83■■■■□ 3.33
ABCA6Q8N139 AC104564.3-201ENST00000582367 638 ntBASIC35.83■■■■□ 3.33
ABCA6Q8N139 NRXN1-228ENST00000628364 2444 ntTSL 5 BASIC35.82■■■■□ 3.32
ABCA6Q8N139 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC35.82■■■■□ 3.32
ABCA6Q8N139 ST7-202ENST00000323984 2142 ntTSL 5 BASIC35.82■■■■□ 3.32
ABCA6Q8N139 ST7-207ENST00000393449 2127 ntTSL 5 BASIC35.82■■■■□ 3.32
ABCA6Q8N139 DRD5P2-201ENST00000421395 2012 ntBASIC35.81■■■■□ 3.32
ABCA6Q8N139 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC35.81■■■■□ 3.32
ABCA6Q8N139 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC35.81■■■■□ 3.32
ABCA6Q8N139 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC35.8■■■■□ 3.32
ABCA6Q8N139 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC35.8■■■■□ 3.32
ABCA6Q8N139 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC35.8■■■■□ 3.32
ABCA6Q8N139 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC35.8■■■■□ 3.32
ABCA6Q8N139 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC35.79■■■■□ 3.32
ABCA6Q8N139 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC35.79■■■■□ 3.32
ABCA6Q8N139 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC35.79■■■■□ 3.32
ABCA6Q8N139 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC35.79■■■■□ 3.32
ABCA6Q8N139 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC35.79■■■■□ 3.32
ABCA6Q8N139 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC35.79■■■■□ 3.32
ABCA6Q8N139 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC35.79■■■■□ 3.32
ABCA6Q8N139 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC35.79■■■■□ 3.32
ABCA6Q8N139 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC35.79■■■■□ 3.32
ABCA6Q8N139 AC142381.2-201ENST00000566120 298 ntBASIC35.78■■■■□ 3.32
ABCA6Q8N139 LINC01003-201ENST00000564834 1764 ntBASIC35.78■■■■□ 3.32
ABCA6Q8N139 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC35.78■■■■□ 3.32
ABCA6Q8N139 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC35.77■■■■□ 3.32
ABCA6Q8N139 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC35.77■■■■□ 3.32
ABCA6Q8N139 SNX5-217ENST00000606557 1087 ntBASIC35.77■■■■□ 3.32
ABCA6Q8N139 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC35.77■■■■□ 3.32
ABCA6Q8N139 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC35.76■■■■□ 3.32
Retrieved 100 of 98,524 protein–RNA pairs in 146.7 ms