Protein–RNA interactions for Protein: Q86UF4

CCDC190, Coiled-coil domain-containing protein 190, humanhuman

Predictions only

Length 302 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC190Q86UF4 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CCDC190Q86UF4 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
CCDC190Q86UF4 AL024507.2-201ENST00000606070 2574 ntBASIC20.73■□□□□ 0.91
CCDC190Q86UF4 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CCDC190Q86UF4 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC20.72■□□□□ 0.91
CCDC190Q86UF4 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CCDC190Q86UF4 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC20.72■□□□□ 0.91
CCDC190Q86UF4 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
CCDC190Q86UF4 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CCDC190Q86UF4 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC20.72■□□□□ 0.91
CCDC190Q86UF4 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC20.72■□□□□ 0.91
CCDC190Q86UF4 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC20.72■□□□□ 0.91
CCDC190Q86UF4 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CCDC190Q86UF4 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC20.71■□□□□ 0.91
CCDC190Q86UF4 EBPL-202ENST00000378268 680 ntTSL 3 BASIC20.71■□□□□ 0.91
CCDC190Q86UF4 CDK2AP1-203ENST00000535979 1281 ntTSL 3 BASIC20.71■□□□□ 0.91
CCDC190Q86UF4 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC20.71■□□□□ 0.91
CCDC190Q86UF4 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC20.71■□□□□ 0.91
CCDC190Q86UF4 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
CCDC190Q86UF4 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
CCDC190Q86UF4 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CCDC190Q86UF4 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
CCDC190Q86UF4 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
CCDC190Q86UF4 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
CCDC190Q86UF4 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CCDC190Q86UF4 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
CCDC190Q86UF4 LANCL3-203ENST00000614025 1469 ntTSL 2 BASIC20.7■□□□□ 0.9
CCDC190Q86UF4 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
CCDC190Q86UF4 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CCDC190Q86UF4 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CCDC190Q86UF4 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
CCDC190Q86UF4 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CCDC190Q86UF4 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
CCDC190Q86UF4 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CCDC190Q86UF4 EI24-212ENST00000615917 1407 ntTSL 2 BASIC20.7■□□□□ 0.9
CCDC190Q86UF4 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CCDC190Q86UF4 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CCDC190Q86UF4 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC20.69■□□□□ 0.9
CCDC190Q86UF4 PEX7-203ENST00000541292 945 ntTSL 5 BASIC20.69■□□□□ 0.9
CCDC190Q86UF4 AL355297.4-201ENST00000603191 1249 ntTSL 3 BASIC20.69■□□□□ 0.9
CCDC190Q86UF4 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
CCDC190Q86UF4 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC20.69■□□□□ 0.9
CCDC190Q86UF4 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
CCDC190Q86UF4 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
CCDC190Q86UF4 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CCDC190Q86UF4 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC20.69■□□□□ 0.9
CCDC190Q86UF4 AC233723.2-201ENST00000623798 2106 ntBASIC20.68■□□□□ 0.9
CCDC190Q86UF4 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
CCDC190Q86UF4 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
CCDC190Q86UF4 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC20.68■□□□□ 0.9
CCDC190Q86UF4 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
CCDC190Q86UF4 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CCDC190Q86UF4 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC20.68■□□□□ 0.9
CCDC190Q86UF4 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CCDC190Q86UF4 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC20.67■□□□□ 0.9
CCDC190Q86UF4 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC20.67■□□□□ 0.9
CCDC190Q86UF4 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC20.67■□□□□ 0.9
CCDC190Q86UF4 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC20.67■□□□□ 0.9
CCDC190Q86UF4 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC20.67■□□□□ 0.9
CCDC190Q86UF4 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
CCDC190Q86UF4 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
CCDC190Q86UF4 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CCDC190Q86UF4 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
CCDC190Q86UF4 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC20.66■□□□□ 0.9
CCDC190Q86UF4 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
CCDC190Q86UF4 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
CCDC190Q86UF4 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
CCDC190Q86UF4 MAF-203ENST00000569649 1217 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
CCDC190Q86UF4 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
CCDC190Q86UF4 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC20.66■□□□□ 0.9
CCDC190Q86UF4 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
CCDC190Q86UF4 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CCDC190Q86UF4 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CCDC190Q86UF4 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CCDC190Q86UF4 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CCDC190Q86UF4 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CCDC190Q86UF4 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CCDC190Q86UF4 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CCDC190Q86UF4 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CCDC190Q86UF4 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CCDC190Q86UF4 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CCDC190Q86UF4 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CCDC190Q86UF4 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC20.64■□□□□ 0.9
CCDC190Q86UF4 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.9
CCDC190Q86UF4 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
CCDC190Q86UF4 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.9
CCDC190Q86UF4 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
CCDC190Q86UF4 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.89
CCDC190Q86UF4 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CCDC190Q86UF4 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CCDC190Q86UF4 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CCDC190Q86UF4 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CCDC190Q86UF4 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CCDC190Q86UF4 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CCDC190Q86UF4 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
CCDC190Q86UF4 EFS-203ENST00000429593 2610 ntTSL 2 BASIC20.62■□□□□ 0.89
CCDC190Q86UF4 AL391121.1-201ENST00000607967 1349 ntBASIC20.62■□□□□ 0.89
CCDC190Q86UF4 USP48-205ENST00000421625 2818 ntTSL 2 BASIC20.62■□□□□ 0.89
CCDC190Q86UF4 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
CCDC190Q86UF4 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC20.62■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 54.7 ms