Protein–RNA interactions for Protein: Q6NVV7

CDPF1, Cysteine-rich DPF motif domain-containing protein 1, humanhuman

Predictions only

Length 123 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDPF1Q6NVV7 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC17.96■□□□□ 0.46
CDPF1Q6NVV7 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CDPF1Q6NVV7 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
CDPF1Q6NVV7 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CDPF1Q6NVV7 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC17.95■□□□□ 0.46
CDPF1Q6NVV7 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
CDPF1Q6NVV7 WWC2-AS2-201ENST00000578387 2183 ntBASIC17.95■□□□□ 0.46
CDPF1Q6NVV7 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC17.95■□□□□ 0.46
CDPF1Q6NVV7 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
CDPF1Q6NVV7 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC17.95■□□□□ 0.46
CDPF1Q6NVV7 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CDPF1Q6NVV7 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
CDPF1Q6NVV7 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
CDPF1Q6NVV7 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC17.94■□□□□ 0.46
CDPF1Q6NVV7 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC17.94■□□□□ 0.46
CDPF1Q6NVV7 FAM89B-201ENST00000316409 1409 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
CDPF1Q6NVV7 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC17.94■□□□□ 0.46
CDPF1Q6NVV7 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC17.94■□□□□ 0.46
CDPF1Q6NVV7 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC17.94■□□□□ 0.46
CDPF1Q6NVV7 AC243773.2-204ENST00000621428 1462 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
CDPF1Q6NVV7 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
CDPF1Q6NVV7 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC17.94■□□□□ 0.46
CDPF1Q6NVV7 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
CDPF1Q6NVV7 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
CDPF1Q6NVV7 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC17.93■□□□□ 0.46
CDPF1Q6NVV7 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CDPF1Q6NVV7 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
CDPF1Q6NVV7 AC005559.1-201ENST00000589661 871 ntBASIC17.93■□□□□ 0.46
CDPF1Q6NVV7 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CDPF1Q6NVV7 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
CDPF1Q6NVV7 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CDPF1Q6NVV7 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CDPF1Q6NVV7 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CDPF1Q6NVV7 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
CDPF1Q6NVV7 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC17.92■□□□□ 0.46
CDPF1Q6NVV7 MIR762-201ENST00000390236 83 ntBASIC17.92■□□□□ 0.46
CDPF1Q6NVV7 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
CDPF1Q6NVV7 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CDPF1Q6NVV7 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
CDPF1Q6NVV7 PELI3-203ENST00000524466 1671 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CDPF1Q6NVV7 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
CDPF1Q6NVV7 AC087741.3-201ENST00000624270 1347 ntBASIC17.92■□□□□ 0.46
CDPF1Q6NVV7 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CDPF1Q6NVV7 AC073130.3-201ENST00000624389 2278 ntBASIC17.92■□□□□ 0.46
CDPF1Q6NVV7 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
CDPF1Q6NVV7 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC17.91■□□□□ 0.46
CDPF1Q6NVV7 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CDPF1Q6NVV7 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
CDPF1Q6NVV7 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC17.9■□□□□ 0.46
CDPF1Q6NVV7 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CDPF1Q6NVV7 DENR-202ENST00000455982 1052 ntTSL 5 BASIC17.9■□□□□ 0.46
CDPF1Q6NVV7 DUX4L28-201ENST00000623687 678 ntBASIC17.9■□□□□ 0.46
CDPF1Q6NVV7 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC17.9■□□□□ 0.46
CDPF1Q6NVV7 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC17.9■□□□□ 0.46
CDPF1Q6NVV7 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CDPF1Q6NVV7 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CDPF1Q6NVV7 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CDPF1Q6NVV7 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CDPF1Q6NVV7 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
CDPF1Q6NVV7 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC17.89■□□□□ 0.46
CDPF1Q6NVV7 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CDPF1Q6NVV7 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CDPF1Q6NVV7 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CDPF1Q6NVV7 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
CDPF1Q6NVV7 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CDPF1Q6NVV7 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
CDPF1Q6NVV7 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
CDPF1Q6NVV7 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
CDPF1Q6NVV7 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC17.88■□□□□ 0.45
CDPF1Q6NVV7 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CDPF1Q6NVV7 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CDPF1Q6NVV7 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CDPF1Q6NVV7 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CDPF1Q6NVV7 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC17.88■□□□□ 0.45
CDPF1Q6NVV7 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC17.88■□□□□ 0.45
CDPF1Q6NVV7 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC17.87■□□□□ 0.45
CDPF1Q6NVV7 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
CDPF1Q6NVV7 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
CDPF1Q6NVV7 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC17.87■□□□□ 0.45
CDPF1Q6NVV7 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC17.87■□□□□ 0.45
CDPF1Q6NVV7 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CDPF1Q6NVV7 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
CDPF1Q6NVV7 CCDC160-202ENST00000517294 1790 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
CDPF1Q6NVV7 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC17.86■□□□□ 0.45
CDPF1Q6NVV7 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC17.86■□□□□ 0.45
CDPF1Q6NVV7 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
CDPF1Q6NVV7 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
CDPF1Q6NVV7 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
CDPF1Q6NVV7 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CDPF1Q6NVV7 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC17.86■□□□□ 0.45
CDPF1Q6NVV7 ABHD17AP4-201ENST00000411545 909 ntBASIC17.86■□□□□ 0.45
CDPF1Q6NVV7 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CDPF1Q6NVV7 DBP-205ENST00000601104 1489 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
CDPF1Q6NVV7 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC17.86■□□□□ 0.45
CDPF1Q6NVV7 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CDPF1Q6NVV7 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CDPF1Q6NVV7 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
CDPF1Q6NVV7 AC233723.2-201ENST00000623798 2106 ntBASIC17.86■□□□□ 0.45
CDPF1Q6NVV7 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC17.86■□□□□ 0.45
CDPF1Q6NVV7 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC17.86■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 74.9 ms