Protein–RNA interactions for Protein: P62312

LSM6, U6 snRNA-associated Sm-like protein LSm6, humanhuman

Known RBP Predictions only

Length 80 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6P62312 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
LSM6P62312 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
LSM6P62312 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
LSM6P62312 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
LSM6P62312 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC20.86■□□□□ 0.93
LSM6P62312 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
LSM6P62312 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC20.86■□□□□ 0.93
LSM6P62312 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
LSM6P62312 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
LSM6P62312 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC20.86■□□□□ 0.93
LSM6P62312 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
LSM6P62312 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
LSM6P62312 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
LSM6P62312 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
LSM6P62312 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC20.85■□□□□ 0.93
LSM6P62312 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
LSM6P62312 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
LSM6P62312 AC138932.3-201ENST00000567634 1902 ntBASIC20.85■□□□□ 0.93
LSM6P62312 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
LSM6P62312 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
LSM6P62312 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
LSM6P62312 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
LSM6P62312 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
LSM6P62312 HYI-213ENST00000583037 1322 ntTSL 5 BASIC20.84■□□□□ 0.93
LSM6P62312 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC20.84■□□□□ 0.93
LSM6P62312 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
LSM6P62312 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
LSM6P62312 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.93
LSM6P62312 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
LSM6P62312 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
LSM6P62312 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
LSM6P62312 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
LSM6P62312 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC20.83■□□□□ 0.93
LSM6P62312 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC20.83■□□□□ 0.93
LSM6P62312 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC20.83■□□□□ 0.93
LSM6P62312 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
LSM6P62312 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
LSM6P62312 AP003733.4-201ENST00000623785 1697 ntBASIC20.83■□□□□ 0.92
LSM6P62312 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
LSM6P62312 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
LSM6P62312 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
LSM6P62312 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
LSM6P62312 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
LSM6P62312 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
LSM6P62312 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC20.81■□□□□ 0.92
LSM6P62312 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
LSM6P62312 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
LSM6P62312 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
LSM6P62312 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
LSM6P62312 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
LSM6P62312 AL592293.1-201ENST00000502889 1188 ntBASIC20.8■□□□□ 0.92
LSM6P62312 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC20.8■□□□□ 0.92
LSM6P62312 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
LSM6P62312 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC20.8■□□□□ 0.92
LSM6P62312 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
LSM6P62312 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
LSM6P62312 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
LSM6P62312 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC20.79■□□□□ 0.92
LSM6P62312 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC20.79■□□□□ 0.92
LSM6P62312 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
LSM6P62312 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
LSM6P62312 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
LSM6P62312 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
LSM6P62312 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC20.78■□□□□ 0.92
LSM6P62312 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC20.78■□□□□ 0.92
LSM6P62312 AC018755.3-202ENST00000596210 929 ntBASIC20.78■□□□□ 0.92
LSM6P62312 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
LSM6P62312 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
LSM6P62312 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC20.78■□□□□ 0.92
LSM6P62312 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
LSM6P62312 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
LSM6P62312 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC20.77■□□□□ 0.92
LSM6P62312 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
LSM6P62312 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
LSM6P62312 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
LSM6P62312 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC20.77■□□□□ 0.91
LSM6P62312 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC20.77■□□□□ 0.91
LSM6P62312 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
LSM6P62312 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC20.76■□□□□ 0.91
LSM6P62312 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
LSM6P62312 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC20.76■□□□□ 0.91
LSM6P62312 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC20.76■□□□□ 0.91
LSM6P62312 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
LSM6P62312 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
LSM6P62312 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
LSM6P62312 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC20.75■□□□□ 0.91
LSM6P62312 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
LSM6P62312 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
LSM6P62312 BRD4-212ENST00000630599 726 ntTSL 2 BASIC20.74■□□□□ 0.91
LSM6P62312 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC20.74■□□□□ 0.91
LSM6P62312 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
LSM6P62312 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
LSM6P62312 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
LSM6P62312 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC20.74■□□□□ 0.91
LSM6P62312 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
LSM6P62312 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC20.73■□□□□ 0.91
LSM6P62312 EED-207ENST00000528180 1745 ntTSL 5 BASIC20.73■□□□□ 0.91
LSM6P62312 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC20.73■□□□□ 0.91
LSM6P62312 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
LSM6P62312 RPS2P7-201ENST00000447334 885 ntBASIC20.73■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 157.9 ms