Protein–RNA interactions for Protein: P62304

SNRPE, Small nuclear ribonucleoprotein E, humanhuman

Known RBP Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPEP62304 AL137060.1-201ENST00000618151 2648 ntBASIC18.41■□□□□ 0.54
SNRPEP62304 WWC2-AS2-201ENST00000578387 2183 ntBASIC18.41■□□□□ 0.54
SNRPEP62304 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
SNRPEP62304 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
SNRPEP62304 AC233723.2-201ENST00000623798 2106 ntBASIC18.41■□□□□ 0.54
SNRPEP62304 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC18.41■□□□□ 0.54
SNRPEP62304 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SNRPEP62304 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
SNRPEP62304 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SNRPEP62304 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
SNRPEP62304 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
SNRPEP62304 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SNRPEP62304 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
SNRPEP62304 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
SNRPEP62304 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
SNRPEP62304 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC18.39■□□□□ 0.54
SNRPEP62304 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
SNRPEP62304 CHCHD4-201ENST00000295767 1603 ntTSL 2 BASIC18.39■□□□□ 0.53
SNRPEP62304 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
SNRPEP62304 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
SNRPEP62304 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
SNRPEP62304 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
SNRPEP62304 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
SNRPEP62304 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
SNRPEP62304 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC18.38■□□□□ 0.53
SNRPEP62304 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC18.38■□□□□ 0.53
SNRPEP62304 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC18.38■□□□□ 0.53
SNRPEP62304 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC18.38■□□□□ 0.53
SNRPEP62304 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
SNRPEP62304 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
SNRPEP62304 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SNRPEP62304 CHCHD4-202ENST00000396914 1405 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SNRPEP62304 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
SNRPEP62304 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
SNRPEP62304 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC18.38■□□□□ 0.53
SNRPEP62304 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC18.37■□□□□ 0.53
SNRPEP62304 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SNRPEP62304 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SNRPEP62304 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
SNRPEP62304 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SNRPEP62304 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SNRPEP62304 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
SNRPEP62304 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
SNRPEP62304 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
SNRPEP62304 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
SNRPEP62304 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
SNRPEP62304 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC18.36■□□□□ 0.53
SNRPEP62304 WHAMMP2-203ENST00000563942 1603 ntBASIC18.36■□□□□ 0.53
SNRPEP62304 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
SNRPEP62304 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
SNRPEP62304 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SNRPEP62304 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC18.35■□□□□ 0.53
SNRPEP62304 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SNRPEP62304 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC18.35■□□□□ 0.53
SNRPEP62304 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
SNRPEP62304 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
SNRPEP62304 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
SNRPEP62304 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
SNRPEP62304 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC18.34■□□□□ 0.53
SNRPEP62304 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
SNRPEP62304 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC18.34■□□□□ 0.53
SNRPEP62304 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SNRPEP62304 AL391422.3-201ENST00000603791 2761 ntBASIC18.34■□□□□ 0.53
SNRPEP62304 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC18.34■□□□□ 0.53
SNRPEP62304 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
SNRPEP62304 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
SNRPEP62304 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
SNRPEP62304 ANKRD60-201ENST00000457363 1038 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
SNRPEP62304 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
SNRPEP62304 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
SNRPEP62304 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
SNRPEP62304 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC18.33■□□□□ 0.52
SNRPEP62304 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
SNRPEP62304 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC18.32■□□□□ 0.52
SNRPEP62304 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SNRPEP62304 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC18.32■□□□□ 0.52
SNRPEP62304 NPTXR-202ENST00000640136 1503 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
SNRPEP62304 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
SNRPEP62304 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SNRPEP62304 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
SNRPEP62304 EED-207ENST00000528180 1745 ntTSL 5 BASIC18.31■□□□□ 0.52
SNRPEP62304 GRK2-204ENST00000526285 1458 ntTSL 5 BASIC18.31■□□□□ 0.52
SNRPEP62304 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC18.31■□□□□ 0.52
SNRPEP62304 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
SNRPEP62304 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC18.31■□□□□ 0.52
SNRPEP62304 SLC16A11-201ENST00000308009 1803 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
SNRPEP62304 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC18.3■□□□□ 0.52
SNRPEP62304 AC073130.3-201ENST00000624389 2278 ntBASIC18.3■□□□□ 0.52
SNRPEP62304 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC18.3■□□□□ 0.52
SNRPEP62304 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SNRPEP62304 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC18.3■□□□□ 0.52
SNRPEP62304 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
SNRPEP62304 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
SNRPEP62304 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC18.3■□□□□ 0.52
SNRPEP62304 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC18.3■□□□□ 0.52
SNRPEP62304 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SNRPEP62304 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
SNRPEP62304 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SNRPEP62304 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SNRPEP62304 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 33.7 ms