Protein–RNA interactions for Protein: P49459

UBE2A, Ubiquitin-conjugating enzyme E2 A, humanhuman

Predictions only

Length 152 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2AP49459 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
UBE2AP49459 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
UBE2AP49459 CEP120-209ENST00000515110 606 ntTSL 3 BASIC14.93□□□□□ -0.02
UBE2AP49459 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
UBE2AP49459 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
UBE2AP49459 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
UBE2AP49459 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
UBE2AP49459 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC14.92□□□□□ -0.02
UBE2AP49459 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC14.92□□□□□ -0.02
UBE2AP49459 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC14.92□□□□□ -0.02
UBE2AP49459 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
UBE2AP49459 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
UBE2AP49459 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
UBE2AP49459 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC14.92□□□□□ -0.02
UBE2AP49459 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
UBE2AP49459 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
UBE2AP49459 REST-210ENST00000638187 1334 ntTSL 5 BASIC14.92□□□□□ -0.02
UBE2AP49459 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
UBE2AP49459 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
UBE2AP49459 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC14.91□□□□□ -0.02
UBE2AP49459 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
UBE2AP49459 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC14.91□□□□□ -0.02
UBE2AP49459 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
UBE2AP49459 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
UBE2AP49459 RPS2-202ENST00000526522 924 ntTSL 2 BASIC14.91□□□□□ -0.02
UBE2AP49459 AC022413.1-201ENST00000624602 984 ntBASIC14.91□□□□□ -0.02
UBE2AP49459 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
UBE2AP49459 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC14.9□□□□□ -0.02
UBE2AP49459 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC14.9□□□□□ -0.02
UBE2AP49459 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
UBE2AP49459 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
UBE2AP49459 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
UBE2AP49459 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
UBE2AP49459 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
UBE2AP49459 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
UBE2AP49459 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
UBE2AP49459 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
UBE2AP49459 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC14.9□□□□□ -0.02
UBE2AP49459 AC060814.1-201ENST00000554326 538 ntBASIC14.9□□□□□ -0.02
UBE2AP49459 MIR3960-201ENST00000583311 91 ntBASIC14.9□□□□□ -0.02
UBE2AP49459 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
UBE2AP49459 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
UBE2AP49459 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
UBE2AP49459 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
UBE2AP49459 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
UBE2AP49459 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC14.89□□□□□ -0.03
UBE2AP49459 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
UBE2AP49459 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
UBE2AP49459 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC14.89□□□□□ -0.03
UBE2AP49459 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC14.89□□□□□ -0.03
UBE2AP49459 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
UBE2AP49459 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
UBE2AP49459 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC14.89□□□□□ -0.03
UBE2AP49459 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC14.89□□□□□ -0.03
UBE2AP49459 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
UBE2AP49459 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
UBE2AP49459 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
UBE2AP49459 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
UBE2AP49459 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
UBE2AP49459 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC14.88□□□□□ -0.03
UBE2AP49459 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
UBE2AP49459 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
UBE2AP49459 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
UBE2AP49459 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC14.88□□□□□ -0.03
UBE2AP49459 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
UBE2AP49459 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
UBE2AP49459 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
UBE2AP49459 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
UBE2AP49459 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
UBE2AP49459 PFN2-211ENST00000489155 636 ntTSL 4 BASIC14.87□□□□□ -0.03
UBE2AP49459 MBP-237ENST00000579129 1052 ntTSL 5 BASIC14.87□□□□□ -0.03
UBE2AP49459 MOB2-207ENST00000614710 705 ntTSL 5 BASIC14.87□□□□□ -0.03
UBE2AP49459 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
UBE2AP49459 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
UBE2AP49459 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC14.87□□□□□ -0.03
UBE2AP49459 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
UBE2AP49459 SMPD5-203ENST00000639008 1464 ntBASIC14.87□□□□□ -0.03
UBE2AP49459 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC14.87□□□□□ -0.03
UBE2AP49459 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
UBE2AP49459 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
UBE2AP49459 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
UBE2AP49459 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
UBE2AP49459 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
UBE2AP49459 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
UBE2AP49459 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC14.86□□□□□ -0.03
UBE2AP49459 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
UBE2AP49459 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC14.86□□□□□ -0.03
UBE2AP49459 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
UBE2AP49459 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
UBE2AP49459 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
UBE2AP49459 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
UBE2AP49459 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
UBE2AP49459 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
UBE2AP49459 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
UBE2AP49459 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
UBE2AP49459 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
UBE2AP49459 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC14.85□□□□□ -0.03
UBE2AP49459 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
UBE2AP49459 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC14.85□□□□□ -0.03
UBE2AP49459 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC14.84□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 332.8 ms