Protein–RNA interactions for Protein: P17980

PSMC3, 26S proteasome regulatory subunit 6A, humanhuman

Predictions only

Length 439 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PSMC3P17980 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
PSMC3P17980 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC24.79■■□□□ 1.56
PSMC3P17980 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC24.78■■□□□ 1.56
PSMC3P17980 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC24.78■■□□□ 1.56
PSMC3P17980 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC24.78■■□□□ 1.56
PSMC3P17980 SHF-207ENST00000560540 2062 ntTSL 5 BASIC24.78■■□□□ 1.56
PSMC3P17980 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
PSMC3P17980 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC24.78■■□□□ 1.56
PSMC3P17980 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC24.78■■□□□ 1.56
PSMC3P17980 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC24.78■■□□□ 1.56
PSMC3P17980 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC24.78■■□□□ 1.56
PSMC3P17980 AC021242.3-201ENST00000607598 1377 ntBASIC24.78■■□□□ 1.56
PSMC3P17980 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC24.77■■□□□ 1.56
PSMC3P17980 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC24.77■■□□□ 1.56
PSMC3P17980 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC24.77■■□□□ 1.56
PSMC3P17980 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC24.77■■□□□ 1.56
PSMC3P17980 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC24.77■■□□□ 1.56
PSMC3P17980 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC24.76■■□□□ 1.55
PSMC3P17980 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC24.76■■□□□ 1.55
PSMC3P17980 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
PSMC3P17980 PEMT-206ENST00000435340 960 ntTSL 5 BASIC24.76■■□□□ 1.55
PSMC3P17980 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC24.76■■□□□ 1.55
PSMC3P17980 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC24.76■■□□□ 1.55
PSMC3P17980 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC24.76■■□□□ 1.55
PSMC3P17980 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC24.76■■□□□ 1.55
PSMC3P17980 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC24.76■■□□□ 1.55
PSMC3P17980 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC24.75■■□□□ 1.55
PSMC3P17980 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
PSMC3P17980 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC24.75■■□□□ 1.55
PSMC3P17980 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
PSMC3P17980 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
PSMC3P17980 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC24.74■■□□□ 1.55
PSMC3P17980 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC24.74■■□□□ 1.55
PSMC3P17980 TSPY9P-201ENST00000440215 945 ntBASIC24.74■■□□□ 1.55
PSMC3P17980 TSPY11P-201ENST00000442607 1045 ntBASIC24.74■■□□□ 1.55
PSMC3P17980 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
PSMC3P17980 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC24.73■■□□□ 1.55
PSMC3P17980 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
PSMC3P17980 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC24.73■■□□□ 1.55
PSMC3P17980 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC24.73■■□□□ 1.55
PSMC3P17980 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC24.73■■□□□ 1.55
PSMC3P17980 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC24.73■■□□□ 1.55
PSMC3P17980 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC24.73■■□□□ 1.55
PSMC3P17980 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC24.73■■□□□ 1.55
PSMC3P17980 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC24.72■■□□□ 1.55
PSMC3P17980 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC24.72■■□□□ 1.55
PSMC3P17980 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
PSMC3P17980 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
PSMC3P17980 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC24.72■■□□□ 1.55
PSMC3P17980 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC24.72■■□□□ 1.55
PSMC3P17980 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC24.72■■□□□ 1.55
PSMC3P17980 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
PSMC3P17980 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC24.72■■□□□ 1.55
PSMC3P17980 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
PSMC3P17980 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC24.71■■□□□ 1.55
PSMC3P17980 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
PSMC3P17980 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC24.71■■□□□ 1.55
PSMC3P17980 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
PSMC3P17980 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
PSMC3P17980 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC24.71■■□□□ 1.55
PSMC3P17980 AP004609.3-201ENST00000610705 1884 ntBASIC24.7■■□□□ 1.55
PSMC3P17980 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC24.7■■□□□ 1.55
PSMC3P17980 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC24.7■■□□□ 1.55
PSMC3P17980 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
PSMC3P17980 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC24.7■■□□□ 1.54
PSMC3P17980 AC092028.1-203ENST00000608262 953 ntBASIC24.7■■□□□ 1.54
PSMC3P17980 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
PSMC3P17980 SLC16A3-214ENST00000582743 2002 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
PSMC3P17980 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
PSMC3P17980 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC24.69■■□□□ 1.54
PSMC3P17980 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
PSMC3P17980 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC24.69■■□□□ 1.54
PSMC3P17980 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
PSMC3P17980 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC24.68■■□□□ 1.54
PSMC3P17980 SERPING1-205ENST00000403558 2231 ntTSL 5 BASIC24.68■■□□□ 1.54
PSMC3P17980 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC24.68■■□□□ 1.54
PSMC3P17980 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC24.68■■□□□ 1.54
PSMC3P17980 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC24.68■■□□□ 1.54
PSMC3P17980 TNIP2-201ENST00000315423 1974 ntAPPRIS P3 TSL 1 (best) BASIC24.67■■□□□ 1.54
PSMC3P17980 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC24.67■■□□□ 1.54
PSMC3P17980 MIR4281-201ENST00000580852 62 ntBASIC24.67■■□□□ 1.54
PSMC3P17980 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC24.67■■□□□ 1.54
PSMC3P17980 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC24.66■■□□□ 1.54
PSMC3P17980 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC24.66■■□□□ 1.54
PSMC3P17980 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC24.66■■□□□ 1.54
PSMC3P17980 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC24.66■■□□□ 1.54
PSMC3P17980 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC24.66■■□□□ 1.54
PSMC3P17980 PLEKHF1-201ENST00000436066 2084 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
PSMC3P17980 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
PSMC3P17980 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC24.65■■□□□ 1.54
PSMC3P17980 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC24.65■■□□□ 1.54
PSMC3P17980 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
PSMC3P17980 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC24.64■■□□□ 1.54
PSMC3P17980 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.54
PSMC3P17980 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC24.64■■□□□ 1.54
PSMC3P17980 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC24.64■■□□□ 1.54
PSMC3P17980 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC24.64■■□□□ 1.54
PSMC3P17980 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC24.64■■□□□ 1.54
PSMC3P17980 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC24.64■■□□□ 1.54
PSMC3P17980 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC24.64■■□□□ 1.53
Retrieved 100 of 98,524 protein–RNA pairs in 72.2 ms