Protein–RNA interactions for Protein: P01562

IFNA1, Interferon alpha-1/13, humanhuman

Predictions only

Length 189 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFNA1P01562 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
IFNA1P01562 MNX1-207ENST00000543409 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
IFNA1P01562 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
IFNA1P01562 AUTS2-202ENST00000403018 957 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
IFNA1P01562 NRGN-202ENST00000412681 1106 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
IFNA1P01562 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
IFNA1P01562 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
IFNA1P01562 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
IFNA1P01562 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
IFNA1P01562 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC18.75■□□□□ 0.59
IFNA1P01562 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
IFNA1P01562 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
IFNA1P01562 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
IFNA1P01562 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
IFNA1P01562 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC18.75■□□□□ 0.59
IFNA1P01562 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
IFNA1P01562 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
IFNA1P01562 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
IFNA1P01562 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
IFNA1P01562 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
IFNA1P01562 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
IFNA1P01562 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
IFNA1P01562 CDK2AP1-203ENST00000535979 1281 ntTSL 3 BASIC18.74■□□□□ 0.59
IFNA1P01562 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
IFNA1P01562 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
IFNA1P01562 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
IFNA1P01562 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
IFNA1P01562 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
IFNA1P01562 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC18.73■□□□□ 0.59
IFNA1P01562 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
IFNA1P01562 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC18.73■□□□□ 0.59
IFNA1P01562 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
IFNA1P01562 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC18.73■□□□□ 0.59
IFNA1P01562 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
IFNA1P01562 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
IFNA1P01562 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC18.72■□□□□ 0.59
IFNA1P01562 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
IFNA1P01562 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC18.72■□□□□ 0.59
IFNA1P01562 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC18.71■□□□□ 0.59
IFNA1P01562 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
IFNA1P01562 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC18.71■□□□□ 0.59
IFNA1P01562 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC18.71■□□□□ 0.59
IFNA1P01562 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC18.71■□□□□ 0.59
IFNA1P01562 AL109917.1-201ENST00000412228 906 ntTSL 2 BASIC18.71■□□□□ 0.59
IFNA1P01562 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
IFNA1P01562 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
IFNA1P01562 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
IFNA1P01562 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC18.71■□□□□ 0.59
IFNA1P01562 LINC00273-201ENST00000539813 1452 ntBASIC18.71■□□□□ 0.59
IFNA1P01562 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.58
IFNA1P01562 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
IFNA1P01562 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
IFNA1P01562 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
IFNA1P01562 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
IFNA1P01562 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
IFNA1P01562 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
IFNA1P01562 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
IFNA1P01562 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
IFNA1P01562 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
IFNA1P01562 EI24-212ENST00000615917 1407 ntTSL 2 BASIC18.69■□□□□ 0.58
IFNA1P01562 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
IFNA1P01562 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
IFNA1P01562 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
IFNA1P01562 EBPL-202ENST00000378268 680 ntTSL 3 BASIC18.69■□□□□ 0.58
IFNA1P01562 AL355297.4-201ENST00000603191 1249 ntTSL 3 BASIC18.69■□□□□ 0.58
IFNA1P01562 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
IFNA1P01562 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
IFNA1P01562 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
IFNA1P01562 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC18.68■□□□□ 0.58
IFNA1P01562 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC18.68■□□□□ 0.58
IFNA1P01562 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
IFNA1P01562 LINC01089-207ENST00000538335 630 ntTSL 3 BASIC18.68■□□□□ 0.58
IFNA1P01562 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC18.68■□□□□ 0.58
IFNA1P01562 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
IFNA1P01562 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
IFNA1P01562 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
IFNA1P01562 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
IFNA1P01562 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
IFNA1P01562 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC18.67■□□□□ 0.58
IFNA1P01562 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
IFNA1P01562 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
IFNA1P01562 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
IFNA1P01562 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
IFNA1P01562 IL13RA1-201ENST00000371642 1096 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
IFNA1P01562 ARTN-201ENST00000372354 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
IFNA1P01562 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
IFNA1P01562 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
IFNA1P01562 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
IFNA1P01562 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
IFNA1P01562 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
IFNA1P01562 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
IFNA1P01562 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
IFNA1P01562 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
IFNA1P01562 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
IFNA1P01562 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
IFNA1P01562 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
IFNA1P01562 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
IFNA1P01562 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
IFNA1P01562 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC18.65■□□□□ 0.58
IFNA1P01562 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC18.65■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 21.5 ms