Protein–RNA interactions for Protein: O95238

SPDEF, SAM pointed domain-containing Ets transcription factor, humanhuman

Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPDEFO95238 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
SPDEFO95238 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC19.92■□□□□ 0.78
SPDEFO95238 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SPDEFO95238 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
SPDEFO95238 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC19.92■□□□□ 0.78
SPDEFO95238 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC19.92■□□□□ 0.78
SPDEFO95238 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC19.92■□□□□ 0.78
SPDEFO95238 CR559946.2-201ENST00000623684 991 ntBASIC19.92■□□□□ 0.78
SPDEFO95238 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC19.92■□□□□ 0.78
SPDEFO95238 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
SPDEFO95238 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC19.92■□□□□ 0.78
SPDEFO95238 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
SPDEFO95238 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC19.92■□□□□ 0.78
SPDEFO95238 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SPDEFO95238 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SPDEFO95238 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SPDEFO95238 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SPDEFO95238 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
SPDEFO95238 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
SPDEFO95238 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
SPDEFO95238 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SPDEFO95238 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
SPDEFO95238 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SPDEFO95238 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
SPDEFO95238 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
SPDEFO95238 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
SPDEFO95238 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SPDEFO95238 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
SPDEFO95238 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SPDEFO95238 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC19.89■□□□□ 0.77
SPDEFO95238 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
SPDEFO95238 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
SPDEFO95238 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
SPDEFO95238 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC19.89■□□□□ 0.77
SPDEFO95238 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC19.89■□□□□ 0.77
SPDEFO95238 WHAMMP3-201ENST00000611636 1609 ntBASIC19.89■□□□□ 0.77
SPDEFO95238 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
SPDEFO95238 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
SPDEFO95238 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
SPDEFO95238 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
SPDEFO95238 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
SPDEFO95238 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
SPDEFO95238 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC19.88■□□□□ 0.77
SPDEFO95238 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
SPDEFO95238 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
SPDEFO95238 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
SPDEFO95238 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
SPDEFO95238 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
SPDEFO95238 MIR3648-2-201ENST00000581792 180 ntBASIC19.88■□□□□ 0.77
SPDEFO95238 MIR3648-1-201ENST00000615959 180 ntBASIC19.88■□□□□ 0.77
SPDEFO95238 GDI1-215ENST00000630693 786 ntTSL 4 BASIC19.88■□□□□ 0.77
SPDEFO95238 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
SPDEFO95238 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
SPDEFO95238 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
SPDEFO95238 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
SPDEFO95238 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
SPDEFO95238 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
SPDEFO95238 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
SPDEFO95238 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC19.87■□□□□ 0.77
SPDEFO95238 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
SPDEFO95238 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
SPDEFO95238 MIR219A2-201ENST00000608502 1504 ntBASIC19.86■□□□□ 0.77
SPDEFO95238 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
SPDEFO95238 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
SPDEFO95238 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
SPDEFO95238 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
SPDEFO95238 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
SPDEFO95238 CHST11-203ENST00000547956 936 ntTSL 2 BASIC19.86■□□□□ 0.77
SPDEFO95238 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
SPDEFO95238 AC010501.1-201ENST00000606270 1962 ntBASIC19.86■□□□□ 0.77
SPDEFO95238 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
SPDEFO95238 AC097639.1-201ENST00000565519 1891 ntBASIC19.86■□□□□ 0.77
SPDEFO95238 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
SPDEFO95238 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
SPDEFO95238 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
SPDEFO95238 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
SPDEFO95238 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
SPDEFO95238 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC19.85■□□□□ 0.77
SPDEFO95238 LINC01124-201ENST00000409786 2117 ntBASIC19.85■□□□□ 0.77
SPDEFO95238 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
SPDEFO95238 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
SPDEFO95238 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC19.84■□□□□ 0.77
SPDEFO95238 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC19.84■□□□□ 0.77
SPDEFO95238 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
SPDEFO95238 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC19.84■□□□□ 0.77
SPDEFO95238 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
SPDEFO95238 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
SPDEFO95238 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
SPDEFO95238 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
SPDEFO95238 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
SPDEFO95238 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC19.83■□□□□ 0.77
SPDEFO95238 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.77
SPDEFO95238 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
SPDEFO95238 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
SPDEFO95238 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC19.83■□□□□ 0.77
SPDEFO95238 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC19.83■□□□□ 0.77
SPDEFO95238 MIR7108-201ENST00000614319 87 ntBASIC19.83■□□□□ 0.77
SPDEFO95238 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
SPDEFO95238 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.76
SPDEFO95238 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 18.7 ms