Protein–RNA interactions for Protein: O76009

KRT33A, Keratin, type I cuticular Ha3-I, humanhuman

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT33AO76009 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC21.34■■□□□ 1.01
KRT33AO76009 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC21.34■■□□□ 1.01
KRT33AO76009 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
KRT33AO76009 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
KRT33AO76009 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
KRT33AO76009 RASL10A-201ENST00000216101 1490 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
KRT33AO76009 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
KRT33AO76009 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
KRT33AO76009 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
KRT33AO76009 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC21.33■■□□□ 1
KRT33AO76009 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
KRT33AO76009 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC21.32■■□□□ 1
KRT33AO76009 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC21.32■■□□□ 1
KRT33AO76009 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
KRT33AO76009 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC21.32■■□□□ 1
KRT33AO76009 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC21.32■■□□□ 1
KRT33AO76009 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
KRT33AO76009 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC21.32■■□□□ 1
KRT33AO76009 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
KRT33AO76009 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC21.31■■□□□ 1
KRT33AO76009 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
KRT33AO76009 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC21.31■■□□□ 1
KRT33AO76009 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
KRT33AO76009 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
KRT33AO76009 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC21.31■■□□□ 1
KRT33AO76009 AC018755.3-202ENST00000596210 929 ntBASIC21.31■■□□□ 1
KRT33AO76009 LTK-203ENST00000453182 2412 ntTSL 2 BASIC21.31■■□□□ 1
KRT33AO76009 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC21.3■■□□□ 1
KRT33AO76009 KRT18P60-201ENST00000312876 1297 ntBASIC21.3■■□□□ 1
KRT33AO76009 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC21.3■■□□□ 1
KRT33AO76009 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
KRT33AO76009 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC21.3■■□□□ 1
KRT33AO76009 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC21.3■■□□□ 1
KRT33AO76009 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC21.3■■□□□ 1
KRT33AO76009 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
KRT33AO76009 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
KRT33AO76009 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC21.29■■□□□ 1
KRT33AO76009 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
KRT33AO76009 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
KRT33AO76009 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC21.29■■□□□ 1
KRT33AO76009 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC21.29■■□□□ 1
KRT33AO76009 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
KRT33AO76009 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC21.29■■□□□ 1
KRT33AO76009 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC21.29■■□□□ 1
KRT33AO76009 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC21.28■■□□□ 1
KRT33AO76009 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC21.28■■□□□ 1
KRT33AO76009 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
KRT33AO76009 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC21.28■■□□□ 1
KRT33AO76009 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC21.28■■□□□ 1
KRT33AO76009 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC21.27■■□□□ 1
KRT33AO76009 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
KRT33AO76009 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC21.27■■□□□ 1
KRT33AO76009 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC21.26■□□□□ 0.99
KRT33AO76009 CEBPA-AS1-201ENST00000592982 2198 ntBASIC21.26■□□□□ 0.99
KRT33AO76009 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
KRT33AO76009 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
KRT33AO76009 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC21.26■□□□□ 0.99
KRT33AO76009 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC21.26■□□□□ 0.99
KRT33AO76009 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
KRT33AO76009 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC21.25■□□□□ 0.99
KRT33AO76009 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
KRT33AO76009 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC21.25■□□□□ 0.99
KRT33AO76009 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
KRT33AO76009 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
KRT33AO76009 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC21.25■□□□□ 0.99
KRT33AO76009 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
KRT33AO76009 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
KRT33AO76009 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC21.25■□□□□ 0.99
KRT33AO76009 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
KRT33AO76009 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
KRT33AO76009 AC012354.3-201ENST00000623734 483 ntBASIC21.25■□□□□ 0.99
KRT33AO76009 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
KRT33AO76009 ERN1-208ENST00000606895 2068 ntBASIC21.25■□□□□ 0.99
KRT33AO76009 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC21.25■□□□□ 0.99
KRT33AO76009 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
KRT33AO76009 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
KRT33AO76009 KRT18P10-201ENST00000388836 1287 ntBASIC21.24■□□□□ 0.99
KRT33AO76009 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
KRT33AO76009 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC21.24■□□□□ 0.99
KRT33AO76009 MIR6765-201ENST00000614092 87 ntBASIC21.24■□□□□ 0.99
KRT33AO76009 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC21.24■□□□□ 0.99
KRT33AO76009 AC129492.7-201ENST00000622992 756 ntBASIC21.24■□□□□ 0.99
KRT33AO76009 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
KRT33AO76009 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC21.24■□□□□ 0.99
KRT33AO76009 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC21.24■□□□□ 0.99
KRT33AO76009 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC21.23■□□□□ 0.99
KRT33AO76009 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
KRT33AO76009 DUX4L9-201ENST00000449051 1259 ntBASIC21.23■□□□□ 0.99
KRT33AO76009 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC21.23■□□□□ 0.99
KRT33AO76009 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC21.23■□□□□ 0.99
KRT33AO76009 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC21.23■□□□□ 0.99
KRT33AO76009 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
KRT33AO76009 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
KRT33AO76009 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
KRT33AO76009 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC21.23■□□□□ 0.99
KRT33AO76009 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
KRT33AO76009 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC21.23■□□□□ 0.99
KRT33AO76009 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
KRT33AO76009 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC21.22■□□□□ 0.99
KRT33AO76009 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 73.2 ms