Protein–RNA interactions for Protein: O75127

PTCD1, Pentatricopeptide repeat-containing protein 1, mitochondrial, humanhuman

Known RBP Predictions only

Length 700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD1O75127 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC30.85■■■□□ 2.53
PTCD1O75127 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC30.85■■■□□ 2.53
PTCD1O75127 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC30.84■■■□□ 2.53
PTCD1O75127 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC30.84■■■□□ 2.53
PTCD1O75127 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC30.83■■■□□ 2.53
PTCD1O75127 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC30.82■■■□□ 2.52
PTCD1O75127 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC30.82■■■□□ 2.52
PTCD1O75127 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC30.82■■■□□ 2.52
PTCD1O75127 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC30.82■■■□□ 2.52
PTCD1O75127 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC30.82■■■□□ 2.52
PTCD1O75127 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC30.81■■■□□ 2.52
PTCD1O75127 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC30.81■■■□□ 2.52
PTCD1O75127 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC30.81■■■□□ 2.52
PTCD1O75127 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC30.81■■■□□ 2.52
PTCD1O75127 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC30.81■■■□□ 2.52
PTCD1O75127 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC30.81■■■□□ 2.52
PTCD1O75127 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC30.8■■■□□ 2.52
PTCD1O75127 AC142086.6-201ENST00000621154 1765 ntBASIC30.8■■■□□ 2.52
PTCD1O75127 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC30.8■■■□□ 2.52
PTCD1O75127 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC30.8■■■□□ 2.52
PTCD1O75127 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC30.79■■■□□ 2.52
PTCD1O75127 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC30.79■■■□□ 2.52
PTCD1O75127 AC131281.2-201ENST00000520478 145 ntBASIC30.79■■■□□ 2.52
PTCD1O75127 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC30.79■■■□□ 2.52
PTCD1O75127 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC30.78■■■□□ 2.52
PTCD1O75127 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC30.78■■■□□ 2.52
PTCD1O75127 SRR-208ENST00000576848 588 ntTSL 4 BASIC30.78■■■□□ 2.52
PTCD1O75127 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC30.78■■■□□ 2.52
PTCD1O75127 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC30.78■■■□□ 2.52
PTCD1O75127 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC30.78■■■□□ 2.52
PTCD1O75127 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC30.77■■■□□ 2.52
PTCD1O75127 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC30.77■■■□□ 2.52
PTCD1O75127 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC30.77■■■□□ 2.52
PTCD1O75127 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC30.77■■■□□ 2.52
PTCD1O75127 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC30.76■■■□□ 2.52
PTCD1O75127 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC30.76■■■□□ 2.51
PTCD1O75127 MIR638-201ENST00000385237 100 ntBASIC30.76■■■□□ 2.51
PTCD1O75127 RPP21-222ENST00000433076 577 ntTSL 2 BASIC30.76■■■□□ 2.51
PTCD1O75127 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC30.76■■■□□ 2.51
PTCD1O75127 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC30.76■■■□□ 2.51
PTCD1O75127 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC30.76■■■□□ 2.51
PTCD1O75127 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC30.75■■■□□ 2.51
PTCD1O75127 SNAI3-AS1-204ENST00000567997 2048 ntBASIC30.75■■■□□ 2.51
PTCD1O75127 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC30.75■■■□□ 2.51
PTCD1O75127 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC30.75■■■□□ 2.51
PTCD1O75127 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC30.75■■■□□ 2.51
PTCD1O75127 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC30.75■■■□□ 2.51
PTCD1O75127 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC30.75■■■□□ 2.51
PTCD1O75127 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC30.75■■■□□ 2.51
PTCD1O75127 FZD2-201ENST00000315323 2112 ntAPPRIS P1 BASIC30.74■■■□□ 2.51
PTCD1O75127 SCCPDH-201ENST00000366510 2503 ntAPPRIS P1 TSL 1 (best) BASIC30.74■■■□□ 2.51
PTCD1O75127 SENP5-202ENST00000419026 973 ntTSL 3 BASIC30.74■■■□□ 2.51
PTCD1O75127 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC30.74■■■□□ 2.51
PTCD1O75127 AC010997.5-201ENST00000609182 354 ntBASIC30.74■■■□□ 2.51
PTCD1O75127 GAK-223ENST00000628912 497 ntTSL 5 BASIC30.74■■■□□ 2.51
PTCD1O75127 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC30.73■■■□□ 2.51
PTCD1O75127 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC30.73■■■□□ 2.51
PTCD1O75127 AL117332.1-201ENST00000622628 974 ntBASIC30.72■■■□□ 2.51
PTCD1O75127 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC30.72■■■□□ 2.51
PTCD1O75127 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC30.71■■■□□ 2.51
PTCD1O75127 SHF-208ENST00000560734 1731 ntTSL 3 BASIC30.71■■■□□ 2.51
PTCD1O75127 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC30.71■■■□□ 2.51
PTCD1O75127 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC30.71■■■□□ 2.51
PTCD1O75127 NALT1-201ENST00000429224 738 ntTSL 5 BASIC30.71■■■□□ 2.51
PTCD1O75127 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC30.71■■■□□ 2.51
PTCD1O75127 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC30.71■■■□□ 2.51
PTCD1O75127 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC30.71■■■□□ 2.51
PTCD1O75127 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC30.7■■■□□ 2.51
PTCD1O75127 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC30.7■■■□□ 2.51
PTCD1O75127 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC30.7■■■□□ 2.51
PTCD1O75127 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC30.7■■■□□ 2.51
PTCD1O75127 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC30.7■■■□□ 2.51
PTCD1O75127 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC30.7■■■□□ 2.51
PTCD1O75127 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC30.7■■■□□ 2.5
PTCD1O75127 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC30.7■■■□□ 2.5
PTCD1O75127 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC30.69■■■□□ 2.5
PTCD1O75127 LSM4-201ENST00000252816 986 ntTSL 2 BASIC30.69■■■□□ 2.5
PTCD1O75127 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC30.69■■■□□ 2.5
PTCD1O75127 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC30.69■■■□□ 2.5
PTCD1O75127 AL136116.3-201ENST00000402907 1138 ntBASIC30.69■■■□□ 2.5
PTCD1O75127 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC30.69■■■□□ 2.5
PTCD1O75127 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC30.69■■■□□ 2.5
PTCD1O75127 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC30.69■■■□□ 2.5
PTCD1O75127 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC30.69■■■□□ 2.5
PTCD1O75127 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC30.68■■■□□ 2.5
PTCD1O75127 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC30.68■■■□□ 2.5
PTCD1O75127 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC30.68■■■□□ 2.5
PTCD1O75127 AL139246.5-201ENST00000606645 996 ntBASIC30.68■■■□□ 2.5
PTCD1O75127 RALB-208ENST00000631312 311 ntTSL 5 BASIC30.68■■■□□ 2.5
PTCD1O75127 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC30.68■■■□□ 2.5
PTCD1O75127 PLEKHF1-201ENST00000436066 2084 ntAPPRIS P1 TSL 1 (best) BASIC30.67■■■□□ 2.5
PTCD1O75127 MTDHP2-201ENST00000601468 714 ntBASIC30.67■■■□□ 2.5
PTCD1O75127 AC011551.1-201ENST00000614101 683 ntBASIC30.67■■■□□ 2.5
PTCD1O75127 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC30.66■■■□□ 2.5
PTCD1O75127 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC30.66■■■□□ 2.5
PTCD1O75127 MIR3621-201ENST00000580529 85 ntBASIC30.66■■■□□ 2.5
PTCD1O75127 MIR6724-1-201ENST00000616420 92 ntBASIC30.66■■■□□ 2.5
PTCD1O75127 MIR6724-2-201ENST00000616483 92 ntBASIC30.66■■■□□ 2.5
PTCD1O75127 MIR6724-4-201ENST00000617390 92 ntBASIC30.66■■■□□ 2.5
PTCD1O75127 MIR6724-3-201ENST00000622482 92 ntBASIC30.66■■■□□ 2.5
Retrieved 100 of 98,524 protein–RNA pairs in 90.4 ms