Protein–RNA interactions for Protein: A6NI15

MSGN1, Mesogenin-1, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSGN1A6NI15 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
MSGN1A6NI15 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC19.61■□□□□ 0.73
MSGN1A6NI15 AC096887.2-201ENST00000623443 1957 ntBASIC19.61■□□□□ 0.73
MSGN1A6NI15 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
MSGN1A6NI15 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC19.6■□□□□ 0.73
MSGN1A6NI15 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
MSGN1A6NI15 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
MSGN1A6NI15 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
MSGN1A6NI15 EED-207ENST00000528180 1745 ntTSL 5 BASIC19.6■□□□□ 0.73
MSGN1A6NI15 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
MSGN1A6NI15 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
MSGN1A6NI15 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC19.6■□□□□ 0.73
MSGN1A6NI15 METRNL-202ENST00000570778 967 ntTSL 5 BASIC19.6■□□□□ 0.73
MSGN1A6NI15 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
MSGN1A6NI15 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
MSGN1A6NI15 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC19.6■□□□□ 0.73
MSGN1A6NI15 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC19.59■□□□□ 0.73
MSGN1A6NI15 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
MSGN1A6NI15 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC19.59■□□□□ 0.73
MSGN1A6NI15 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC19.59■□□□□ 0.73
MSGN1A6NI15 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
MSGN1A6NI15 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
MSGN1A6NI15 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
MSGN1A6NI15 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
MSGN1A6NI15 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC19.58■□□□□ 0.73
MSGN1A6NI15 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
MSGN1A6NI15 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
MSGN1A6NI15 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
MSGN1A6NI15 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC19.58■□□□□ 0.72
MSGN1A6NI15 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
MSGN1A6NI15 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.72
MSGN1A6NI15 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
MSGN1A6NI15 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
MSGN1A6NI15 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
MSGN1A6NI15 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
MSGN1A6NI15 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC19.57■□□□□ 0.72
MSGN1A6NI15 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
MSGN1A6NI15 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
MSGN1A6NI15 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
MSGN1A6NI15 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
MSGN1A6NI15 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
MSGN1A6NI15 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC19.57■□□□□ 0.72
MSGN1A6NI15 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
MSGN1A6NI15 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
MSGN1A6NI15 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
MSGN1A6NI15 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC19.56■□□□□ 0.72
MSGN1A6NI15 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
MSGN1A6NI15 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
MSGN1A6NI15 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
MSGN1A6NI15 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
MSGN1A6NI15 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
MSGN1A6NI15 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
MSGN1A6NI15 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC19.55■□□□□ 0.72
MSGN1A6NI15 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
MSGN1A6NI15 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
MSGN1A6NI15 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
MSGN1A6NI15 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
MSGN1A6NI15 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
MSGN1A6NI15 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
MSGN1A6NI15 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
MSGN1A6NI15 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
MSGN1A6NI15 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
MSGN1A6NI15 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
MSGN1A6NI15 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
MSGN1A6NI15 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
MSGN1A6NI15 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC19.54■□□□□ 0.72
MSGN1A6NI15 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC19.54■□□□□ 0.72
MSGN1A6NI15 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC19.54■□□□□ 0.72
MSGN1A6NI15 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
MSGN1A6NI15 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC19.54■□□□□ 0.72
MSGN1A6NI15 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
MSGN1A6NI15 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
MSGN1A6NI15 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC19.54■□□□□ 0.72
MSGN1A6NI15 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
MSGN1A6NI15 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
MSGN1A6NI15 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC19.54■□□□□ 0.72
MSGN1A6NI15 DUSP8P5-201ENST00000422884 1815 ntBASIC19.53■□□□□ 0.72
MSGN1A6NI15 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC19.53■□□□□ 0.72
MSGN1A6NI15 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC19.53■□□□□ 0.72
MSGN1A6NI15 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
MSGN1A6NI15 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
MSGN1A6NI15 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC19.53■□□□□ 0.72
MSGN1A6NI15 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC19.53■□□□□ 0.72
MSGN1A6NI15 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
MSGN1A6NI15 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
MSGN1A6NI15 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
MSGN1A6NI15 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
MSGN1A6NI15 ME2-208ENST00000638937 2471 ntTSL 5 BASIC19.53■□□□□ 0.72
MSGN1A6NI15 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
MSGN1A6NI15 AL359258.2-201ENST00000564063 1566 ntBASIC19.53■□□□□ 0.72
MSGN1A6NI15 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC19.53■□□□□ 0.72
MSGN1A6NI15 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
MSGN1A6NI15 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
MSGN1A6NI15 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
MSGN1A6NI15 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
MSGN1A6NI15 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
MSGN1A6NI15 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
MSGN1A6NI15 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.72
MSGN1A6NI15 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC19.52■□□□□ 0.72
MSGN1A6NI15 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 35.1 ms