Protein–RNA interactions for Protein: A0A1B0GX49

TRBV6-4, T-cell receptor beta variable 6-4 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV6-4A0A1B0GX49 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
TRBV6-4A0A1B0GX49 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
TRBV6-4A0A1B0GX49 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC16.74■□□□□ 0.27
TRBV6-4A0A1B0GX49 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
TRBV6-4A0A1B0GX49 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
TRBV6-4A0A1B0GX49 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
TRBV6-4A0A1B0GX49 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
TRBV6-4A0A1B0GX49 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
TRBV6-4A0A1B0GX49 AC138932.3-201ENST00000567634 1902 ntBASIC16.74■□□□□ 0.27
TRBV6-4A0A1B0GX49 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
TRBV6-4A0A1B0GX49 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
TRBV6-4A0A1B0GX49 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
TRBV6-4A0A1B0GX49 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
TRBV6-4A0A1B0GX49 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
TRBV6-4A0A1B0GX49 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
TRBV6-4A0A1B0GX49 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
TRBV6-4A0A1B0GX49 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC16.73■□□□□ 0.27
TRBV6-4A0A1B0GX49 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC16.73■□□□□ 0.27
TRBV6-4A0A1B0GX49 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
TRBV6-4A0A1B0GX49 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
TRBV6-4A0A1B0GX49 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
TRBV6-4A0A1B0GX49 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
TRBV6-4A0A1B0GX49 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
TRBV6-4A0A1B0GX49 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
TRBV6-4A0A1B0GX49 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC16.72■□□□□ 0.27
TRBV6-4A0A1B0GX49 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
TRBV6-4A0A1B0GX49 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
TRBV6-4A0A1B0GX49 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
TRBV6-4A0A1B0GX49 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
TRBV6-4A0A1B0GX49 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
TRBV6-4A0A1B0GX49 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
TRBV6-4A0A1B0GX49 TMEM120A-214ENST00000493111 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
TRBV6-4A0A1B0GX49 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
TRBV6-4A0A1B0GX49 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
TRBV6-4A0A1B0GX49 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
TRBV6-4A0A1B0GX49 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
TRBV6-4A0A1B0GX49 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
TRBV6-4A0A1B0GX49 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
TRBV6-4A0A1B0GX49 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
TRBV6-4A0A1B0GX49 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
TRBV6-4A0A1B0GX49 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TRBV6-4A0A1B0GX49 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
TRBV6-4A0A1B0GX49 AC133552.2-201ENST00000619106 1032 ntBASIC16.7■□□□□ 0.26
TRBV6-4A0A1B0GX49 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
TRBV6-4A0A1B0GX49 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
TRBV6-4A0A1B0GX49 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TRBV6-4A0A1B0GX49 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
TRBV6-4A0A1B0GX49 AC009831.1-201ENST00000580420 1582 ntBASIC16.69■□□□□ 0.26
TRBV6-4A0A1B0GX49 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
TRBV6-4A0A1B0GX49 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
TRBV6-4A0A1B0GX49 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
TRBV6-4A0A1B0GX49 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC16.69■□□□□ 0.26
TRBV6-4A0A1B0GX49 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
TRBV6-4A0A1B0GX49 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
TRBV6-4A0A1B0GX49 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
TRBV6-4A0A1B0GX49 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC16.69■□□□□ 0.26
TRBV6-4A0A1B0GX49 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
TRBV6-4A0A1B0GX49 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
TRBV6-4A0A1B0GX49 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
TRBV6-4A0A1B0GX49 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
TRBV6-4A0A1B0GX49 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC16.68■□□□□ 0.26
TRBV6-4A0A1B0GX49 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
TRBV6-4A0A1B0GX49 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
TRBV6-4A0A1B0GX49 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
TRBV6-4A0A1B0GX49 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
TRBV6-4A0A1B0GX49 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
TRBV6-4A0A1B0GX49 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC16.67■□□□□ 0.26
TRBV6-4A0A1B0GX49 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
TRBV6-4A0A1B0GX49 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
TRBV6-4A0A1B0GX49 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC16.67■□□□□ 0.26
TRBV6-4A0A1B0GX49 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC16.67■□□□□ 0.26
TRBV6-4A0A1B0GX49 EED-207ENST00000528180 1745 ntTSL 5 BASIC16.67■□□□□ 0.26
TRBV6-4A0A1B0GX49 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
TRBV6-4A0A1B0GX49 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC16.67■□□□□ 0.26
TRBV6-4A0A1B0GX49 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC16.67■□□□□ 0.26
TRBV6-4A0A1B0GX49 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC16.67■□□□□ 0.26
TRBV6-4A0A1B0GX49 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TRBV6-4A0A1B0GX49 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC16.66■□□□□ 0.26
TRBV6-4A0A1B0GX49 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
TRBV6-4A0A1B0GX49 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC16.66■□□□□ 0.26
TRBV6-4A0A1B0GX49 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
TRBV6-4A0A1B0GX49 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC16.66■□□□□ 0.26
TRBV6-4A0A1B0GX49 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
TRBV6-4A0A1B0GX49 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TRBV6-4A0A1B0GX49 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TRBV6-4A0A1B0GX49 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
TRBV6-4A0A1B0GX49 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC16.65■□□□□ 0.26
TRBV6-4A0A1B0GX49 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC16.65■□□□□ 0.26
TRBV6-4A0A1B0GX49 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
TRBV6-4A0A1B0GX49 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TRBV6-4A0A1B0GX49 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TRBV6-4A0A1B0GX49 AL139125.2-201ENST00000623134 1869 ntBASIC16.65■□□□□ 0.26
TRBV6-4A0A1B0GX49 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TRBV6-4A0A1B0GX49 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
TRBV6-4A0A1B0GX49 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC16.64■□□□□ 0.25
TRBV6-4A0A1B0GX49 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC16.64■□□□□ 0.25
TRBV6-4A0A1B0GX49 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
TRBV6-4A0A1B0GX49 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
TRBV6-4A0A1B0GX49 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
TRBV6-4A0A1B0GX49 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC16.63■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 24.4 ms