Protein–RNA interactions for Protein: A0A0K0K1A5

TRBV6-5, T-cell receptor beta variable 6-5 (Fragment), humanhuman

Predictions only

Length 114 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV6-5A0A0K0K1A5 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TRBV6-5A0A0K0K1A5 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC16.82■□□□□ 0.28
TRBV6-5A0A0K0K1A5 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC16.82■□□□□ 0.28
TRBV6-5A0A0K0K1A5 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
TRBV6-5A0A0K0K1A5 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TRBV6-5A0A0K0K1A5 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
TRBV6-5A0A0K0K1A5 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
TRBV6-5A0A0K0K1A5 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC16.81■□□□□ 0.28
TRBV6-5A0A0K0K1A5 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC16.81■□□□□ 0.28
TRBV6-5A0A0K0K1A5 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
TRBV6-5A0A0K0K1A5 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TRBV6-5A0A0K0K1A5 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
TRBV6-5A0A0K0K1A5 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
TRBV6-5A0A0K0K1A5 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
TRBV6-5A0A0K0K1A5 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
TRBV6-5A0A0K0K1A5 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TRBV6-5A0A0K0K1A5 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
TRBV6-5A0A0K0K1A5 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TRBV6-5A0A0K0K1A5 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TRBV6-5A0A0K0K1A5 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TRBV6-5A0A0K0K1A5 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
TRBV6-5A0A0K0K1A5 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC16.8■□□□□ 0.28
TRBV6-5A0A0K0K1A5 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC16.8■□□□□ 0.28
TRBV6-5A0A0K0K1A5 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC16.8■□□□□ 0.28
TRBV6-5A0A0K0K1A5 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TRBV6-5A0A0K0K1A5 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC16.8■□□□□ 0.28
TRBV6-5A0A0K0K1A5 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
TRBV6-5A0A0K0K1A5 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC16.8■□□□□ 0.28
TRBV6-5A0A0K0K1A5 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TRBV6-5A0A0K0K1A5 HGH1-207ENST00000628266 258 ntTSL 5 BASIC16.8■□□□□ 0.28
TRBV6-5A0A0K0K1A5 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
TRBV6-5A0A0K0K1A5 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
TRBV6-5A0A0K0K1A5 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
TRBV6-5A0A0K0K1A5 DUSP8P5-201ENST00000422884 1815 ntBASIC16.8■□□□□ 0.28
TRBV6-5A0A0K0K1A5 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
TRBV6-5A0A0K0K1A5 CASK-201ENST00000378154 2494 ntTSL 5 BASIC16.79■□□□□ 0.28
TRBV6-5A0A0K0K1A5 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
TRBV6-5A0A0K0K1A5 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
TRBV6-5A0A0K0K1A5 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC16.79■□□□□ 0.28
TRBV6-5A0A0K0K1A5 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TRBV6-5A0A0K0K1A5 AC126177.7-201ENST00000547904 679 ntBASIC16.79■□□□□ 0.28
TRBV6-5A0A0K0K1A5 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC16.79■□□□□ 0.28
TRBV6-5A0A0K0K1A5 MED25-210ENST00000612854 801 ntTSL 5 BASIC16.79■□□□□ 0.28
TRBV6-5A0A0K0K1A5 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
TRBV6-5A0A0K0K1A5 MED25-214ENST00000622402 642 ntTSL 5 BASIC16.79■□□□□ 0.28
TRBV6-5A0A0K0K1A5 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TRBV6-5A0A0K0K1A5 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
TRBV6-5A0A0K0K1A5 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TRBV6-5A0A0K0K1A5 HLA-V-202ENST00000446817 847 ntBASIC16.78■□□□□ 0.28
TRBV6-5A0A0K0K1A5 MIR6089-201ENST00000616698 64 ntBASIC16.78■□□□□ 0.28
TRBV6-5A0A0K0K1A5 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC16.78■□□□□ 0.28
TRBV6-5A0A0K0K1A5 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC16.78■□□□□ 0.28
TRBV6-5A0A0K0K1A5 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
TRBV6-5A0A0K0K1A5 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
TRBV6-5A0A0K0K1A5 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
TRBV6-5A0A0K0K1A5 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC16.77■□□□□ 0.28
TRBV6-5A0A0K0K1A5 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
TRBV6-5A0A0K0K1A5 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC16.77■□□□□ 0.28
TRBV6-5A0A0K0K1A5 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
TRBV6-5A0A0K0K1A5 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
TRBV6-5A0A0K0K1A5 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC16.77■□□□□ 0.27
TRBV6-5A0A0K0K1A5 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC16.77■□□□□ 0.27
TRBV6-5A0A0K0K1A5 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
TRBV6-5A0A0K0K1A5 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC16.77■□□□□ 0.27
TRBV6-5A0A0K0K1A5 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC16.76■□□□□ 0.27
TRBV6-5A0A0K0K1A5 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
TRBV6-5A0A0K0K1A5 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
TRBV6-5A0A0K0K1A5 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
TRBV6-5A0A0K0K1A5 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC16.76■□□□□ 0.27
TRBV6-5A0A0K0K1A5 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
TRBV6-5A0A0K0K1A5 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
TRBV6-5A0A0K0K1A5 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
TRBV6-5A0A0K0K1A5 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
TRBV6-5A0A0K0K1A5 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC16.76■□□□□ 0.27
TRBV6-5A0A0K0K1A5 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC16.76■□□□□ 0.27
TRBV6-5A0A0K0K1A5 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC16.76■□□□□ 0.27
TRBV6-5A0A0K0K1A5 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
TRBV6-5A0A0K0K1A5 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
TRBV6-5A0A0K0K1A5 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
TRBV6-5A0A0K0K1A5 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
TRBV6-5A0A0K0K1A5 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC16.75■□□□□ 0.27
TRBV6-5A0A0K0K1A5 DUX4L11-201ENST00000611504 1267 ntBASIC16.75■□□□□ 0.27
TRBV6-5A0A0K0K1A5 DUX4L12-201ENST00000614593 1267 ntBASIC16.75■□□□□ 0.27
TRBV6-5A0A0K0K1A5 DUX4L14-201ENST00000621227 1267 ntBASIC16.75■□□□□ 0.27
TRBV6-5A0A0K0K1A5 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC16.75■□□□□ 0.27
TRBV6-5A0A0K0K1A5 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
TRBV6-5A0A0K0K1A5 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
TRBV6-5A0A0K0K1A5 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
TRBV6-5A0A0K0K1A5 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
TRBV6-5A0A0K0K1A5 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
TRBV6-5A0A0K0K1A5 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
TRBV6-5A0A0K0K1A5 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC16.74■□□□□ 0.27
TRBV6-5A0A0K0K1A5 HES6-205ENST00000409356 528 ntTSL 2 BASIC16.74■□□□□ 0.27
TRBV6-5A0A0K0K1A5 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
TRBV6-5A0A0K0K1A5 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
TRBV6-5A0A0K0K1A5 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC16.74■□□□□ 0.27
TRBV6-5A0A0K0K1A5 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
TRBV6-5A0A0K0K1A5 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC16.74■□□□□ 0.27
TRBV6-5A0A0K0K1A5 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
TRBV6-5A0A0K0K1A5 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC16.73■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 26.3 ms