Protein–RNA interactions for Protein: P35269

GTF2F1, General transcription factor IIF subunit 1, humanhuman

Known RBP eCLIP

Length 517 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2F1P35269 TCAF1-205ENST00000479870 5733 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.235e-6■□□□□ 9.6
GTF2F1P35269 TCAF1-204ENST00000478172 576 ntTSL 412.19□□□□□ -0.465e-6■□□□□ 9.6
GTF2F1P35269 TCAF1-201ENST00000355951 3343 ntAPPRIS ALT1 TSL 1 (best) BASIC10.92□□□□□ -0.665e-6■□□□□ 9.6
GTF2F1P35269 TTYH3-207ENST00000498454 587 ntTSL 222.48■■□□□ 1.193e-6■□□□□ 9.6
GTF2F1P35269 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.653e-6■□□□□ 9.6
GTF2F1P35269 AGT-201ENST00000366667 2291 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.453e-6■□□□□ 9.6
GTF2F1P35269 ZMIZ1-203ENST00000472035 457 ntTSL 216.25■□□□□ 0.193e-6■□□□□ 9.6
GTF2F1P35269 GAPDH-209ENST00000492719 930 ntTSL 315.64■□□□□ 0.093e-6■□□□□ 9.6
GTF2F1P35269 GAPDH-210ENST00000496049 390 ntTSL 215.64■□□□□ 0.093e-6■□□□□ 9.6
GTF2F1P35269 AL590096.1-201ENST00000615483 511 ntTSL 215.35■□□□□ 0.053e-6■□□□□ 9.6
GTF2F1P35269 GAPDH-208ENST00000474249 1333 ntTSL 515.32■□□□□ 0.043e-6■□□□□ 9.6
GTF2F1P35269 GAPDH-205ENST00000396861 1348 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.173e-6■□□□□ 9.6
GTF2F1P35269 CEBPZOS-203ENST00000397226 1499 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.183e-6■□□□□ 9.6
GTF2F1P35269 GAPDH-202ENST00000396856 1266 ntTSL 5 BASIC13.57□□□□□ -0.243e-6■□□□□ 9.6
GTF2F1P35269 AL590096.1-202ENST00000618162 580 ntTSL 3 BASIC13.24□□□□□ -0.293e-6■□□□□ 9.6
GTF2F1P35269 VIL1-205ENST00000454069 532 ntTSL 311.68□□□□□ -0.543e-6■□□□□ 9.6
GTF2F1P35269 TTYH3-205ENST00000429448 756 ntTSL 211.29□□□□□ -0.63e-6■□□□□ 9.6
GTF2F1P35269 MCM8-204ENST00000378896 3769 ntAPPRIS P4 TSL 1 (best) BASIC11.16□□□□□ -0.623e-6■□□□□ 9.6
GTF2F1P35269 MCM8-202ENST00000378883 3574 ntTSL 1 (best) BASIC10.93□□□□□ -0.663e-6■□□□□ 9.6
GTF2F1P35269 MCM8-203ENST00000378886 3835 ntTSL 1 (best) BASIC10.91□□□□□ -0.663e-6■□□□□ 9.6
GTF2F1P35269 CEBPZOS-202ENST00000397064 568 ntAPPRIS P1 TSL 4 BASIC10.42□□□□□ -0.743e-6■□□□□ 9.6
GTF2F1P35269 CEBPZOS-204ENST00000402297 3158 ntAPPRIS P1 TSL 2 BASIC9.94□□□□□ -0.823e-6■□□□□ 9.6
GTF2F1P35269 CEBPZOS-201ENST00000392061 695 ntAPPRIS P1 TSL 5 BASIC9.85□□□□□ -0.833e-6■□□□□ 9.6
GTF2F1P35269 MCM8-205ENST00000610722 7486 ntAPPRIS P4 TSL 1 (best) BASIC9.8□□□□□ -0.843e-6■□□□□ 9.6
GTF2F1P35269 CEBPZOS-207ENST00000470216 800 ntTSL 58.2□□□□□ -1.13e-6■□□□□ 9.6
GTF2F1P35269 MCM8-201ENST00000265187 3442 ntAPPRIS ALT2 TSL 1 (best) BASIC6.92□□□□□ -1.33e-6■□□□□ 9.6
GTF2F1P35269 CEBPZOS-205ENST00000406711 687 ntAPPRIS P1 TSL 5 BASIC5.41□□□□□ -1.543e-6■□□□□ 9.6
GTF2F1P35269 NPLOC4-217ENST00000574897 2365 ntTSL 226.75■■□□□ 1.873e-6■□□□□ 9.5
GTF2F1P35269 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC22.27■■□□□ 1.163e-6■□□□□ 9.5
GTF2F1P35269 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.153e-6■□□□□ 9.5
GTF2F1P35269 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC19.5■□□□□ 0.713e-6■□□□□ 9.5
GTF2F1P35269 ASPH-214ENST00000519234 2874 ntTSL 5 BASIC16.93■□□□□ 0.33e-6■□□□□ 9.5
GTF2F1P35269 ASPH-202ENST00000379449 1603 ntTSL 1 (best) BASIC16.02■□□□□ 0.163e-6■□□□□ 9.5
GTF2F1P35269 C10orf76-202ENST00000370033 4119 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.023e-6■□□□□ 9.5
GTF2F1P35269 NPLOC4-202ENST00000374747 5538 ntTSL 2 BASIC14.19□□□□□ -0.143e-6■□□□□ 9.5
GTF2F1P35269 ASPH-205ENST00000445642 3717 ntTSL 2 BASIC13.9□□□□□ -0.183e-6■□□□□ 9.5
GTF2F1P35269 ASPH-203ENST00000379454 5268 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.183e-6■□□□□ 9.5
GTF2F1P35269 ASPH-201ENST00000356457 3730 ntTSL 1 (best) BASIC13.15□□□□□ -0.33e-6■□□□□ 9.5
GTF2F1P35269 ASPH-208ENST00000517856 6337 ntTSL 2 BASIC13.11□□□□□ -0.313e-6■□□□□ 9.5
GTF2F1P35269 ANKRD28-202ENST00000412318 4408 ntTSL 25.07□□□□□ -1.63e-6■□□□□ 9.5
GTF2F1P35269 RAB17-209ENST00000466244 937 ntTSL 216.37■□□□□ 0.211e-8■□□□□ 9.5
GTF2F1P35269 SCARB1-209ENST00000545305 851 ntTSL 214.28□□□□□ -0.123e-22■□□□□ 9.5
GTF2F1P35269 SEMA3B-215ENST00000621029 934 ntTSL 532.25■■■□□ 2.754e-8■□□□□ 9.5
GTF2F1P35269 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.684e-16■□□□□ 9.5
GTF2F1P35269 GMPR-203ENST00000543191 675 ntTSL 211.11□□□□□ -0.634e-16■□□□□ 9.5
GTF2F1P35269 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.219e-14■□□□□ 9.5
GTF2F1P35269 GPAA1-210ENST00000528073 986 ntTSL 322.38■■□□□ 1.179e-14■□□□□ 9.5
GTF2F1P35269 GPAA1-207ENST00000526341 557 ntTSL 522.33■■□□□ 1.179e-14■□□□□ 9.5
GTF2F1P35269 GPAA1-211ENST00000529503 878 ntTSL 522.33■■□□□ 1.179e-14■□□□□ 9.5
GTF2F1P35269 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC22.29■■□□□ 1.169e-14■□□□□ 9.5
GTF2F1P35269 GPAA1-204ENST00000525087 937 ntTSL 522.28■■□□□ 1.169e-14■□□□□ 9.5
GTF2F1P35269 GPAA1-217ENST00000532758 1079 ntTSL 322.28■■□□□ 1.169e-14■□□□□ 9.5
GTF2F1P35269 GPAA1-214ENST00000530633 835 ntTSL 322.21■■□□□ 1.159e-14■□□□□ 9.5
GTF2F1P35269 GPAA1-213ENST00000530258 535 ntTSL 422.19■■□□□ 1.149e-14■□□□□ 9.5
GTF2F1P35269 GPAA1-205ENST00000525308 903 ntTSL 220.29■□□□□ 0.849e-14■□□□□ 9.5
GTF2F1P35269 GPAA1-203ENST00000524418 825 ntTSL 318.13■□□□□ 0.499e-14■□□□□ 9.5
GTF2F1P35269 GPAA1-208ENST00000527144 767 ntTSL 315.31■□□□□ 0.049e-14■□□□□ 9.5
GTF2F1P35269 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC19.67■□□□□ 0.743e-14■□□□□ 9.5
GTF2F1P35269 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.583e-14■□□□□ 9.5
GTF2F1P35269 BTNL9-208ENST00000512570 885 ntTSL 516.92■□□□□ 0.33e-14■□□□□ 9.5
GTF2F1P35269 PCBP2-206ENST00000455667 2741 ntAPPRIS ALT1 TSL 1 (best) BASIC11.89□□□□□ -0.512e-31■□□□□ 9.5
GTF2F1P35269 PCBP2-216ENST00000550192 734 ntTSL 411.03□□□□□ -0.642e-31■□□□□ 9.5
GTF2F1P35269 PCBP2-223ENST00000552819 1418 ntAPPRIS ALT1 TSL 2 BASIC10.68□□□□□ -0.72e-31■□□□□ 9.5
GTF2F1P35269 PCBP2-221ENST00000551104 681 ntTSL 39.31□□□□□ -0.922e-31■□□□□ 9.5
GTF2F1P35269 PCBP2-220ENST00000550910 449 ntTSL 36.96□□□□□ -1.32e-31■□□□□ 9.5
GTF2F1P35269 PCBP2-224ENST00000552980 527 ntTSL 34.73□□□□□ -1.652e-31■□□□□ 9.5
GTF2F1P35269 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.941e-19■□□□□ 9.4
GTF2F1P35269 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.621e-19■□□□□ 9.4
GTF2F1P35269 SLC39A7-204ENST00000463972 1410 ntTSL 214.5□□□□□ -0.091e-19■□□□□ 9.4
GTF2F1P35269 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC29.07■■■□□ 2.241e-8■□□□□ 9.4
GTF2F1P35269 STX16-210ENST00000458280 553 ntTSL 424.44■■□□□ 1.51e-10■□□□□ 9.4
GTF2F1P35269 STX16-217ENST00000490700 661 ntTSL 317.96■□□□□ 0.471e-10■□□□□ 9.4
GTF2F1P35269 STX16-201ENST00000312283 785 ntTSL 317.86■□□□□ 0.451e-10■□□□□ 9.4
GTF2F1P35269 STX16-208ENST00000412911 560 ntTSL 417.74■□□□□ 0.431e-10■□□□□ 9.4
GTF2F1P35269 STX16-215ENST00000476384 936 ntTSL 516.74■□□□□ 0.271e-10■□□□□ 9.4
GTF2F1P35269 STX16-216ENST00000483434 874 ntTSL 315.75■□□□□ 0.111e-10■□□□□ 9.4
GTF2F1P35269 STX16-207ENST00000371141 4937 ntAPPRIS P3 TSL 2 BASIC15.57■□□□□ 0.081e-10■□□□□ 9.4
GTF2F1P35269 STX16-211ENST00000460655 572 ntTSL 414.71□□□□□ -0.051e-10■□□□□ 9.4
GTF2F1P35269 STX16-202ENST00000355957 4897 ntTSL 2 BASIC14.41□□□□□ -0.11e-10■□□□□ 9.4
GTF2F1P35269 STX16-205ENST00000361830 4318 ntTSL 5 BASIC14.11□□□□□ -0.151e-10■□□□□ 9.4
GTF2F1P35269 STX16-219ENST00000496003 815 ntTSL 513.8□□□□□ -0.21e-10■□□□□ 9.4
GTF2F1P35269 STX16-220ENST00000496117 528 ntTSL 512.99□□□□□ -0.331e-10■□□□□ 9.4
GTF2F1P35269 STX16-206ENST00000371132 4552 ntTSL 1 (best) BASIC12.17□□□□□ -0.461e-10■□□□□ 9.4
GTF2F1P35269 STX16-204ENST00000359617 4273 ntTSL 5 BASIC11.83□□□□□ -0.511e-10■□□□□ 9.4
GTF2F1P35269 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC18.58■□□□□ 0.562e-14■□□□□ 9.4
GTF2F1P35269 LDLR-206ENST00000557958 1881 ntTSL 218.52■□□□□ 0.562e-14■□□□□ 9.4
GTF2F1P35269 LDLR-202ENST00000455727 2333 ntTSL 2 BASIC17.33■□□□□ 0.362e-14■□□□□ 9.4
GTF2F1P35269 LDLR-213ENST00000560502 509 ntTSL 215.84■□□□□ 0.132e-14■□□□□ 9.4
GTF2F1P35269 LDLR-203ENST00000535915 2768 ntTSL 2 BASIC15.26■□□□□ 0.032e-14■□□□□ 9.4
GTF2F1P35269 LDLR-207ENST00000558013 3144 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 02e-14■□□□□ 9.4
GTF2F1P35269 LDLR-205ENST00000557933 2941 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.082e-14■□□□□ 9.4
GTF2F1P35269 LDLR-208ENST00000558518 3617 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.272e-14■□□□□ 9.4
GTF2F1P35269 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.759e-8■□□□□ 9.4
GTF2F1P35269 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.922e-12■□□□□ 9.4
GTF2F1P35269 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC19.66■□□□□ 0.742e-7■□□□□ 9.4
GTF2F1P35269 ESS2-204ENST00000472073 2101 ntTSL 521.85■■□□□ 1.094e-6■□□□□ 9.4
GTF2F1P35269 ESS2-202ENST00000434568 1808 ntTSL 521.66■■□□□ 1.064e-6■□□□□ 9.4
GTF2F1P35269 ESS2-201ENST00000252137 5392 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.124e-6■□□□□ 9.4
GTF2F1P35269 CIRBP-220ENST00000588917 1087 ntTSL 220.83■□□□□ 0.932e-8■□□□□ 9.4
GTF2F1P35269 CIRBP-237ENST00000592234 571 ntTSL 520.7■□□□□ 0.92e-8■□□□□ 9.4
Retrieved 100 of 18,214 protein–RNA pairs in 392 ms