RNA–Protein interactions for RNA: ENST00000478172.1

TCAF1-204, Transcript of TRPM8 channel associated factor 1, humanhuman

TSL 4

Gene TCAF1, Length 576 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCAF1-204ENST00000478172 NISCHQ9Y2I1 1504 aa26.75■■□□□ 1.87
TCAF1-204ENST00000478172 ABCC9O60706 1549 aa24.32■■□□□ 1.48
TCAF1-204ENST00000478172 CCDC180Q9P1Z9 1646 aa24.15■■□□□ 1.46
TCAF1-204ENST00000478172 RB1CC1Q8TDY2 1594 aa23.06■■□□□ 1.28
TCAF1-204ENST00000478172 DNAJC5BQ9UF47 199 aa22.9■■□□□ 1.26
TCAF1-204ENST00000478172 NACADO15069 1562 aa22.83■■□□□ 1.25
TCAF1-204ENST00000478172 DCAF8L2P0C7V8 631 aa22.71■■□□□ 1.23
TCAF1-204ENST00000478172 UNC13AQ9UPW8 1703 aa22.62■■□□□ 1.21
TCAF1-204ENST00000478172 PABPN1Q86U42 306 aaKnown RBP eCLIP22.58■■□□□ 1.21
TCAF1-204ENST00000478172 MYO15BQ96JP2 1530 aa22.39■■□□□ 1.17
TCAF1-204ENST00000478172 BICRAQ9NZM4 1560 aa22.38■■□□□ 1.17
TCAF1-204ENST00000478172 ZCCHC6Q5VYS8 1495 aaKnown RBP22.14■■□□□ 1.13
TCAF1-204ENST00000478172 DCAF1Q9Y4B6 1507 aa22.05■■□□□ 1.12
TCAF1-204ENST00000478172 SCRIBQ14160 1630 aa22.03■■□□□ 1.12
TCAF1-204ENST00000478172 SHROOM4Q9ULL8 1493 aa22.02■■□□□ 1.12
TCAF1-204ENST00000478172 CC2D2AQ9P2K1 1620 aa21.97■■□□□ 1.11
TCAF1-204ENST00000478172 CECR2Q9BXF3 1484 aa21.9■■□□□ 1.1
TCAF1-204ENST00000478172 EIF4G1Q04637 1599 aaKnown RBP21.86■■□□□ 1.09
TCAF1-204ENST00000478172 DNAJC5Q9H3Z4 198 aa21.15■□□□□ 0.98
TCAF1-204ENST00000478172 ERCC6Q03468 1493 aa21.04■□□□□ 0.96
TCAF1-204ENST00000478172 NCAPD3P42695 1498 aa21.03■□□□□ 0.96
TCAF1-204ENST00000478172 CUX2O14529 1486 aa21.01■□□□□ 0.95
TCAF1-204ENST00000478172 ATAD2BQ9ULI0 1458 aa20.97■□□□□ 0.95
TCAF1-204ENST00000478172 SMARCA4P51532 1647 aa20.96■□□□□ 0.95
TCAF1-204ENST00000478172 SMARCA2P51531 1590 aa20.93■□□□□ 0.94
TCAF1-204ENST00000478172 HMGXB3Q12766 1538 aa20.91■□□□□ 0.94
TCAF1-204ENST00000478172 NESP48681 1621 aa20.83■□□□□ 0.93
TCAF1-204ENST00000478172 BAZ1AQ9NRL2 1556 aaPredicted RBP20.8■□□□□ 0.92
TCAF1-204ENST00000478172 BAZ1BQ9UIG0 1483 aaKnown RBP20.8■□□□□ 0.92
TCAF1-204ENST00000478172 PEG3Q9GZU2 1588 aa20.7■□□□□ 0.9
TCAF1-204ENST00000478172 THOC2Q8NI27 1593 aaKnown RBP20.68■□□□□ 0.9
TCAF1-204ENST00000478172 LAMC3Q9Y6N6 1575 aa20.65■□□□□ 0.9
TCAF1-204ENST00000478172 KIF21AQ7Z4S6 1674 aa20.63■□□□□ 0.89
TCAF1-204ENST00000478172 MROH2BQ7Z745 1585 aa20.63■□□□□ 0.89
TCAF1-204ENST00000478172 PDS5BQ9NTI5 1447 aa20.51■□□□□ 0.87
TCAF1-204ENST00000478172 WIZO95785 1651 aa20.43■□□□□ 0.86
TCAF1-204ENST00000478172 CADPSQ9ULU8 1353 aa20.39■□□□□ 0.85
TCAF1-204ENST00000478172 MRC2Q9UBG0 1479 aa20.37■□□□□ 0.85
TCAF1-204ENST00000478172 WDR62O43379 1518 aa20.32■□□□□ 0.84
TCAF1-204ENST00000478172 CEP164Q9UPV0 1460 aa20.26■□□□□ 0.83
TCAF1-204ENST00000478172 TRIM41Q8WV44 630 aa20.25■□□□□ 0.83
TCAF1-204ENST00000478172 FANCD2Q9BXW9 1451 aa20.21■□□□□ 0.83
TCAF1-204ENST00000478172 TOP2AP11388 1531 aaKnown RBP20.12■□□□□ 0.81
TCAF1-204ENST00000478172 CFTRP13569 1480 aa20.12■□□□□ 0.81
TCAF1-204ENST00000478172 RSF1Q96T23 1441 aaPredicted RBP20.1■□□□□ 0.81
TCAF1-204ENST00000478172 PRDM2Q13029 1718 aa20.05■□□□□ 0.8
TCAF1-204ENST00000478172 URB2Q14146 1524 aaKnown RBP20.05■□□□□ 0.8
TCAF1-204ENST00000478172 OSCARQ8IYS5 282 aa19.98■□□□□ 0.79
TCAF1-204ENST00000478172 CCDC88BA6NC98 1476 aa19.86■□□□□ 0.77
TCAF1-204ENST00000478172 ZNF608Q9ULD9 1512 aaPredicted RBP19.84■□□□□ 0.77
TCAF1-204ENST00000478172 IFT140Q96RY7 1462 aa19.84■□□□□ 0.77
TCAF1-204ENST00000478172 RIMBP3CA6NJZ7 1639 aa19.84■□□□□ 0.77
TCAF1-204ENST00000478172 RIMBP3BA6NNM3 1639 aa19.84■□□□□ 0.77
TCAF1-204ENST00000478172 RIMBP3Q9UFD9 1639 aa19.84■□□□□ 0.77
TCAF1-204ENST00000478172 TOPBP1Q92547 1522 aa19.81■□□□□ 0.76
TCAF1-204ENST00000478172 EIF4G3O43432 1585 aaKnown RBP19.78■□□□□ 0.76
TCAF1-204ENST00000478172 DNMBPQ6XZF7 1577 aa19.74■□□□□ 0.75
TCAF1-204ENST00000478172 ABCC8Q09428 1581 aa19.73■□□□□ 0.75
TCAF1-204ENST00000478172 ARHGEF11O15085 1522 aa19.72■□□□□ 0.75
TCAF1-204ENST00000478172 CHD1O14646 1710 aa19.71■□□□□ 0.75
TCAF1-204ENST00000478172 TARBP1Q13395 1621 aaKnown RBP19.65■□□□□ 0.74
TCAF1-204ENST00000478172 AQRO60306 1485 aaKnown RBP eCLIP19.63■□□□□ 0.73
TCAF1-204ENST00000478172 POLA1P09884 1462 aaPredicted RBP19.59■□□□□ 0.73
TCAF1-204ENST00000478172 FBLN2P98095 1184 aa19.57■□□□□ 0.72
TCAF1-204ENST00000478172 CYB5RLQ6IPT4 315 aa19.56■□□□□ 0.72
TCAF1-204ENST00000478172 RAD54L2Q9Y4B4 1467 aa19.53■□□□□ 0.72
TCAF1-204ENST00000478172 ARAP1Q96P48 1450 aa19.51■□□□□ 0.71
TCAF1-204ENST00000478172 SOGA1O94964 1423 aa19.49■□□□□ 0.71
TCAF1-204ENST00000478172 TDRD9Q8NDG6 1382 aaKnown RBP19.47■□□□□ 0.71
TCAF1-204ENST00000478172 FGD5Q6ZNL6 1462 aa19.46■□□□□ 0.71
TCAF1-204ENST00000478172 TRHP20396 242 aaPredicted RBP19.45■□□□□ 0.7
TCAF1-204ENST00000478172 SNAPC4Q5SXM2 1469 aa19.45■□□□□ 0.7
TCAF1-204ENST00000478172 WDR97A6NE52 1622 aa19.43■□□□□ 0.7
TCAF1-204ENST00000478172 CUX1P39880 1505 aa19.4■□□□□ 0.7
TCAF1-204ENST00000478172 SYNJ1O43426 1573 aa19.39■□□□□ 0.69
TCAF1-204ENST00000478172 CLASP1Q7Z460 1538 aa19.38■□□□□ 0.69
TCAF1-204ENST00000478172 MAGI1Q96QZ7 1491 aaPredicted RBP19.36■□□□□ 0.69
TCAF1-204ENST00000478172 CHMP7Q8WUX9 453 aaPredicted RBP19.36■□□□□ 0.69
TCAF1-204ENST00000478172 PBRM1Q86U86 1689 aa19.36■□□□□ 0.69
TCAF1-204ENST00000478172 GRIN2BQ13224 1484 aa19.35■□□□□ 0.69
TCAF1-204ENST00000478172 SYNJ2O15056 1496 aa19.3■□□□□ 0.68
TCAF1-204ENST00000478172 GAPVD1Q14C86 1478 aa19.26■□□□□ 0.67
TCAF1-204ENST00000478172 ABCA5Q8WWZ7 1642 aa19.23■□□□□ 0.67
TCAF1-204ENST00000478172 ABCA10Q8WWZ4 1543 aa19.2■□□□□ 0.66
TCAF1-204ENST00000478172 SUPT5HO00267 1087 aaKnown RBP19.13■□□□□ 0.65
TCAF1-204ENST00000478172 ADAMTS12P58397 1594 aa19.1■□□□□ 0.65
TCAF1-204ENST00000478172 GRIN2AQ12879 1464 aa19.1■□□□□ 0.65
TCAF1-204ENST00000478172 ERCC6L2Q5T890 1561 aa19.1■□□□□ 0.65
TCAF1-204ENST00000478172 WRNQ14191 1432 aaPredicted RBP eCLIP19.08■□□□□ 0.64
TCAF1-204ENST00000478172 BIVM-ERCC5R4GMW8 1640 aa19.07■□□□□ 0.64
TCAF1-204ENST00000478172 CEP170Q5SW79 1584 aa19.07■□□□□ 0.64
TCAF1-204ENST00000478172 TOP2BQ02880 1626 aa19.05■□□□□ 0.64
TCAF1-204ENST00000478172 AEBP2Q6ZN18 517 aaPredicted RBP19.03■□□□□ 0.64
TCAF1-204ENST00000478172 NUP160Q12769 1436 aa19.01■□□□□ 0.63
TCAF1-204ENST00000478172 SHROOM2Q13796 1616 aa19■□□□□ 0.63
TCAF1-204ENST00000478172 FHAD1B1AJZ9 1412 aa18.99■□□□□ 0.63
TCAF1-204ENST00000478172 ERICH3Q5RHP9 1530 aa18.96■□□□□ 0.63
TCAF1-204ENST00000478172 KIF13AQ9H1H9 1805 aa18.9■□□□□ 0.62
TCAF1-204ENST00000478172 PRG4Q92954 1404 aaPredicted RBP18.87■□□□□ 0.61
TCAF1-204ENST00000478172 RUSC2Q8N2Y8 1516 aa18.84■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms