RNA–Protein interactions for RNA: ENST00000532758.5

GPAA1-217, Transcript of glycosylphosphatidylinositol anchor attachment 1, humanhuman

TSL 3

Gene GPAA1, Length 1,079 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPAA1-217ENST00000532758 NISCHQ9Y2I1 1504 aa48.97■■■■■ 5.43
GPAA1-217ENST00000532758 ABCC9O60706 1549 aa43.9■■■■■ 4.62
GPAA1-217ENST00000532758 CCDC180Q9P1Z9 1646 aa43.73■■■■■ 4.59
GPAA1-217ENST00000532758 RB1CC1Q8TDY2 1594 aa41.67■■■■■ 4.26
GPAA1-217ENST00000532758 DCAF8L2P0C7V8 631 aa41.52■■■■■ 4.24
GPAA1-217ENST00000532758 NACADO15069 1562 aa41.41■■■■■ 4.22
GPAA1-217ENST00000532758 DNAJC5BQ9UF47 199 aa41.21■■■■■ 4.19
GPAA1-217ENST00000532758 PABPN1Q86U42 306 aaKnown RBP eCLIP41■■■■■ 4.15
GPAA1-217ENST00000532758 MYO15BQ96JP2 1530 aa40.83■■■■■ 4.13
GPAA1-217ENST00000532758 UNC13AQ9UPW8 1703 aa40.64■■■■■ 4.1
GPAA1-217ENST00000532758 ZCCHC6Q5VYS8 1495 aaKnown RBP40.58■■■■■ 4.09
GPAA1-217ENST00000532758 BICRAQ9NZM4 1560 aa40.51■■■■■ 4.08
GPAA1-217ENST00000532758 DCAF1Q9Y4B6 1507 aa40.35■■■■■ 4.05
GPAA1-217ENST00000532758 SCRIBQ14160 1630 aa40.02■■■■■ 4
GPAA1-217ENST00000532758 SHROOM4Q9ULL8 1493 aa39.84■■■■□ 3.97
GPAA1-217ENST00000532758 CC2D2AQ9P2K1 1620 aa39.56■■■■□ 3.92
GPAA1-217ENST00000532758 EIF4G1Q04637 1599 aaKnown RBP39.5■■■■□ 3.91
GPAA1-217ENST00000532758 CECR2Q9BXF3 1484 aa39.49■■■■□ 3.91
GPAA1-217ENST00000532758 NCAPD3P42695 1498 aa38.29■■■■□ 3.72
GPAA1-217ENST00000532758 ATAD2BQ9ULI0 1458 aa38.22■■■■□ 3.71
GPAA1-217ENST00000532758 SMARCA4P51532 1647 aa38.12■■■■□ 3.69
GPAA1-217ENST00000532758 SMARCA2P51531 1590 aa38.03■■■■□ 3.68
GPAA1-217ENST00000532758 BAZ1AQ9NRL2 1556 aaPredicted RBP37.95■■■■□ 3.67
GPAA1-217ENST00000532758 HMGXB3Q12766 1538 aa37.93■■■■□ 3.66
GPAA1-217ENST00000532758 ERCC6Q03468 1493 aa37.85■■■■□ 3.65
GPAA1-217ENST00000532758 BAZ1BQ9UIG0 1483 aaKnown RBP37.84■■■■□ 3.65
GPAA1-217ENST00000532758 MROH2BQ7Z745 1585 aa37.78■■■■□ 3.64
GPAA1-217ENST00000532758 NESP48681 1621 aa37.75■■■■□ 3.63
GPAA1-217ENST00000532758 PEG3Q9GZU2 1588 aa37.71■■■■□ 3.63
GPAA1-217ENST00000532758 DNAJC5Q9H3Z4 198 aa37.69■■■■□ 3.62
GPAA1-217ENST00000532758 CUX2O14529 1486 aa37.67■■■■□ 3.62
GPAA1-217ENST00000532758 LAMC3Q9Y6N6 1575 aa37.34■■■■□ 3.57
GPAA1-217ENST00000532758 WIZO95785 1651 aa37.28■■■■□ 3.56
GPAA1-217ENST00000532758 THOC2Q8NI27 1593 aaKnown RBP37.21■■■■□ 3.55
GPAA1-217ENST00000532758 PDS5BQ9NTI5 1447 aa37.2■■■■□ 3.55
GPAA1-217ENST00000532758 CADPSQ9ULU8 1353 aa37.18■■■■□ 3.54
GPAA1-217ENST00000532758 KIF21AQ7Z4S6 1674 aa37.1■■■■□ 3.53
GPAA1-217ENST00000532758 RSF1Q96T23 1441 aaPredicted RBP37.05■■■■□ 3.52
GPAA1-217ENST00000532758 MRC2Q9UBG0 1479 aa36.87■■■■□ 3.49
GPAA1-217ENST00000532758 TOP2AP11388 1531 aaKnown RBP36.79■■■■□ 3.48
GPAA1-217ENST00000532758 CFTRP13569 1480 aa36.74■■■■□ 3.47
GPAA1-217ENST00000532758 FANCD2Q9BXW9 1451 aa36.74■■■■□ 3.47
GPAA1-217ENST00000532758 CEP164Q9UPV0 1460 aa36.74■■■■□ 3.47
GPAA1-217ENST00000532758 WDR62O43379 1518 aa36.74■■■■□ 3.47
GPAA1-217ENST00000532758 CCDC88BA6NC98 1476 aa36.46■■■■□ 3.43
GPAA1-217ENST00000532758 URB2Q14146 1524 aaKnown RBP36.44■■■■□ 3.42
GPAA1-217ENST00000532758 TRIM41Q8WV44 630 aa36.17■■■■□ 3.38
GPAA1-217ENST00000532758 PRDM2Q13029 1718 aa36.14■■■■□ 3.38
GPAA1-217ENST00000532758 OSCARQ8IYS5 282 aa36.1■■■■□ 3.37
GPAA1-217ENST00000532758 TOPBP1Q92547 1522 aa36.04■■■■□ 3.36
GPAA1-217ENST00000532758 ZNF608Q9ULD9 1512 aaPredicted RBP36.02■■■■□ 3.36
GPAA1-217ENST00000532758 IFT140Q96RY7 1462 aa36■■■■□ 3.35
GPAA1-217ENST00000532758 ABCC8Q09428 1581 aa35.9■■■■□ 3.34
GPAA1-217ENST00000532758 DNMBPQ6XZF7 1577 aa35.86■■■■□ 3.33
GPAA1-217ENST00000532758 AQRO60306 1485 aaKnown RBP eCLIP35.73■■■■□ 3.313e-10■■■■■ 43.6
GPAA1-217ENST00000532758 EIF4G3O43432 1585 aaKnown RBP35.7■■■■□ 3.31
GPAA1-217ENST00000532758 POLA1P09884 1462 aaPredicted RBP35.69■■■■□ 3.3
GPAA1-217ENST00000532758 TARBP1Q13395 1621 aaKnown RBP35.66■■■■□ 3.3
GPAA1-217ENST00000532758 RAD54L2Q9Y4B4 1467 aa35.63■■■■□ 3.29
GPAA1-217ENST00000532758 SUPT5HO00267 1087 aaKnown RBP35.63■■■■□ 3.29
GPAA1-217ENST00000532758 SOGA1O94964 1423 aa35.58■■■■□ 3.29
GPAA1-217ENST00000532758 TDRD9Q8NDG6 1382 aaKnown RBP35.55■■■■□ 3.28
GPAA1-217ENST00000532758 FBLN2P98095 1184 aa35.54■■■■□ 3.28
GPAA1-217ENST00000532758 RIMBP3CA6NJZ7 1639 aa35.51■■■■□ 3.28
GPAA1-217ENST00000532758 RIMBP3BA6NNM3 1639 aa35.51■■■■□ 3.28
GPAA1-217ENST00000532758 RIMBP3Q9UFD9 1639 aa35.51■■■■□ 3.28
GPAA1-217ENST00000532758 FGD5Q6ZNL6 1462 aa35.49■■■■□ 3.27
GPAA1-217ENST00000532758 CUX1P39880 1505 aa35.47■■■■□ 3.27
GPAA1-217ENST00000532758 ARHGEF11O15085 1522 aa35.44■■■■□ 3.26
GPAA1-217ENST00000532758 CHD1O14646 1710 aa35.38■■■■□ 3.25
GPAA1-217ENST00000532758 CYB5RLQ6IPT4 315 aa35.32■■■■□ 3.24
GPAA1-217ENST00000532758 SNAPC4Q5SXM2 1469 aa35.31■■■■□ 3.24
GPAA1-217ENST00000532758 CHMP7Q8WUX9 453 aaPredicted RBP35.24■■■■□ 3.23
GPAA1-217ENST00000532758 GRIN2BQ13224 1484 aa35.2■■■■□ 3.23
GPAA1-217ENST00000532758 WDR97A6NE52 1622 aa35.2■■■■□ 3.23
GPAA1-217ENST00000532758 MAGI1Q96QZ7 1491 aaPredicted RBP35.15■■■■□ 3.22
GPAA1-217ENST00000532758 ARAP1Q96P48 1450 aa35.13■■■■□ 3.21
GPAA1-217ENST00000532758 GAPVD1Q14C86 1478 aa35.1■■■■□ 3.21
GPAA1-217ENST00000532758 SYNJ2O15056 1496 aa35.06■■■■□ 3.2
GPAA1-217ENST00000532758 ABCA10Q8WWZ4 1543 aa35.05■■■■□ 3.2
GPAA1-217ENST00000532758 CLASP1Q7Z460 1538 aa35.03■■■■□ 3.2
GPAA1-217ENST00000532758 SYNJ1O43426 1573 aa35■■■■□ 3.19
GPAA1-217ENST00000532758 WRNQ14191 1432 aaPredicted RBP eCLIP34.97■■■■□ 3.19
GPAA1-217ENST00000532758 PBRM1Q86U86 1689 aa34.95■■■■□ 3.19
GPAA1-217ENST00000532758 ABCA5Q8WWZ7 1642 aa34.94■■■■□ 3.18
GPAA1-217ENST00000532758 TRHP20396 242 aaPredicted RBP34.9■■■■□ 3.18
GPAA1-217ENST00000532758 TOP2BQ02880 1626 aa34.85■■■■□ 3.17
GPAA1-217ENST00000532758 BIVM-ERCC5R4GMW8 1640 aa34.81■■■■□ 3.16
GPAA1-217ENST00000532758 GRIN2AQ12879 1464 aa34.74■■■■□ 3.15
GPAA1-217ENST00000532758 ADAMTS12P58397 1594 aa34.69■■■■□ 3.14
GPAA1-217ENST00000532758 FHAD1B1AJZ9 1412 aa34.66■■■■□ 3.14
GPAA1-217ENST00000532758 NUP160Q12769 1436 aa34.62■■■■□ 3.13
GPAA1-217ENST00000532758 CEP170Q5SW79 1584 aa34.62■■■■□ 3.13
GPAA1-217ENST00000532758 ERCC6L2Q5T890 1561 aa34.59■■■■□ 3.13
GPAA1-217ENST00000532758 ERICH3Q5RHP9 1530 aa34.57■■■■□ 3.12
GPAA1-217ENST00000532758 SHROOM2Q13796 1616 aa34.37■■■■□ 3.09
GPAA1-217ENST00000532758 JPH4Q96JJ6 628 aa34.37■■■■□ 3.09
GPAA1-217ENST00000532758 PRG4Q92954 1404 aaPredicted RBP34.34■■■■□ 3.09
GPAA1-217ENST00000532758 IGF1RP08069 1367 aa34.3■■■■□ 3.08
GPAA1-217ENST00000532758 KIF27Q86VH2 1401 aa34.25■■■■□ 3.07
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms