RNA–Protein interactions for RNA: ENST00000454069.5

VIL1-205, Transcript of villin 1, humanhuman

TSL 3

Gene VIL1, Length 532 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIL1-205ENST00000454069 NISCHQ9Y2I1 1504 aa25.69■■□□□ 1.7
VIL1-205ENST00000454069 ABCC9O60706 1549 aa23.08■■□□□ 1.28
VIL1-205ENST00000454069 CCDC180Q9P1Z9 1646 aa23.01■■□□□ 1.27
VIL1-205ENST00000454069 RB1CC1Q8TDY2 1594 aa21.96■■□□□ 1.11
VIL1-205ENST00000454069 NACADO15069 1562 aa21.81■■□□□ 1.08
VIL1-205ENST00000454069 DCAF8L2P0C7V8 631 aa21.79■■□□□ 1.08
VIL1-205ENST00000454069 DNAJC5BQ9UF47 199 aa21.68■■□□□ 1.06
VIL1-205ENST00000454069 PABPN1Q86U42 306 aaKnown RBP eCLIP21.52■■□□□ 1.04
VIL1-205ENST00000454069 MYO15BQ96JP2 1530 aa21.51■■□□□ 1.03
VIL1-205ENST00000454069 UNC13AQ9UPW8 1703 aa21.38■■□□□ 1.01
VIL1-205ENST00000454069 BICRAQ9NZM4 1560 aa21.27■■□□□ 1
VIL1-205ENST00000454069 ZCCHC6Q5VYS8 1495 aaKnown RBP21.26■□□□□ 0.99
VIL1-205ENST00000454069 DCAF1Q9Y4B6 1507 aa21.23■□□□□ 0.99
VIL1-205ENST00000454069 SHROOM4Q9ULL8 1493 aa21.03■□□□□ 0.96
VIL1-205ENST00000454069 SCRIBQ14160 1630 aa20.96■□□□□ 0.95
VIL1-205ENST00000454069 CC2D2AQ9P2K1 1620 aa20.82■□□□□ 0.92
VIL1-205ENST00000454069 CECR2Q9BXF3 1484 aa20.8■□□□□ 0.92
VIL1-205ENST00000454069 EIF4G1Q04637 1599 aaKnown RBP20.78■□□□□ 0.92
VIL1-205ENST00000454069 NCAPD3P42695 1498 aa20.16■□□□□ 0.82
VIL1-205ENST00000454069 ATAD2BQ9ULI0 1458 aa20.07■□□□□ 0.8
VIL1-205ENST00000454069 SMARCA2P51531 1590 aa20.01■□□□□ 0.79
VIL1-205ENST00000454069 SMARCA4P51532 1647 aa20.01■□□□□ 0.79
VIL1-205ENST00000454069 DNAJC5Q9H3Z4 198 aa19.97■□□□□ 0.79
VIL1-205ENST00000454069 HMGXB3Q12766 1538 aa19.96■□□□□ 0.79
VIL1-205ENST00000454069 ERCC6Q03468 1493 aa19.95■□□□□ 0.78
VIL1-205ENST00000454069 BAZ1AQ9NRL2 1556 aaPredicted RBP19.95■□□□□ 0.78
VIL1-205ENST00000454069 CUX2O14529 1486 aa19.91■□□□□ 0.78
VIL1-205ENST00000454069 BAZ1BQ9UIG0 1483 aaKnown RBP19.87■□□□□ 0.77
VIL1-205ENST00000454069 PEG3Q9GZU2 1588 aa19.83■□□□□ 0.76
VIL1-205ENST00000454069 NESP48681 1621 aa19.8■□□□□ 0.76
VIL1-205ENST00000454069 MROH2BQ7Z745 1585 aa19.78■□□□□ 0.76
VIL1-205ENST00000454069 LAMC3Q9Y6N6 1575 aa19.68■□□□□ 0.74
VIL1-205ENST00000454069 PDS5BQ9NTI5 1447 aa19.62■□□□□ 0.73
VIL1-205ENST00000454069 THOC2Q8NI27 1593 aaKnown RBP19.57■□□□□ 0.72
VIL1-205ENST00000454069 CADPSQ9ULU8 1353 aa19.57■□□□□ 0.72
VIL1-205ENST00000454069 WIZO95785 1651 aa19.52■□□□□ 0.71
VIL1-205ENST00000454069 KIF21AQ7Z4S6 1674 aa19.5■□□□□ 0.71
VIL1-205ENST00000454069 MRC2Q9UBG0 1479 aa19.4■□□□□ 0.7
VIL1-205ENST00000454069 RSF1Q96T23 1441 aaPredicted RBP19.39■□□□□ 0.69
VIL1-205ENST00000454069 WDR62O43379 1518 aa19.33■□□□□ 0.68
VIL1-205ENST00000454069 CEP164Q9UPV0 1460 aa19.33■□□□□ 0.68
VIL1-205ENST00000454069 CFTRP13569 1480 aa19.31■□□□□ 0.68
VIL1-205ENST00000454069 FANCD2Q9BXW9 1451 aa19.3■□□□□ 0.68
VIL1-205ENST00000454069 TOP2AP11388 1531 aaKnown RBP19.29■□□□□ 0.68
VIL1-205ENST00000454069 URB2Q14146 1524 aaKnown RBP19.12■□□□□ 0.65
VIL1-205ENST00000454069 CCDC88BA6NC98 1476 aa19.1■□□□□ 0.65
VIL1-205ENST00000454069 TRIM41Q8WV44 630 aa19.08■□□□□ 0.64
VIL1-205ENST00000454069 OSCARQ8IYS5 282 aa19.07■□□□□ 0.64
VIL1-205ENST00000454069 PRDM2Q13029 1718 aa19.02■□□□□ 0.63
VIL1-205ENST00000454069 IFT140Q96RY7 1462 aa18.96■□□□□ 0.63
VIL1-205ENST00000454069 ABCC8Q09428 1581 aa18.94■□□□□ 0.62
VIL1-205ENST00000454069 TOPBP1Q92547 1522 aa18.92■□□□□ 0.62
VIL1-205ENST00000454069 ZNF608Q9ULD9 1512 aaPredicted RBP18.89■□□□□ 0.61
VIL1-205ENST00000454069 DNMBPQ6XZF7 1577 aa18.85■□□□□ 0.61
VIL1-205ENST00000454069 EIF4G3O43432 1585 aaKnown RBP18.76■□□□□ 0.59
VIL1-205ENST00000454069 AQRO60306 1485 aaKnown RBP eCLIP18.75■□□□□ 0.591e-6■■■■□ 24
VIL1-205ENST00000454069 TARBP1Q13395 1621 aaKnown RBP18.74■□□□□ 0.59
VIL1-205ENST00000454069 POLA1P09884 1462 aaPredicted RBP18.73■□□□□ 0.59
VIL1-205ENST00000454069 RIMBP3CA6NJZ7 1639 aa18.71■□□□□ 0.59
VIL1-205ENST00000454069 RIMBP3BA6NNM3 1639 aa18.71■□□□□ 0.59
VIL1-205ENST00000454069 RIMBP3Q9UFD9 1639 aa18.71■□□□□ 0.59
VIL1-205ENST00000454069 SOGA1O94964 1423 aa18.69■□□□□ 0.58
VIL1-205ENST00000454069 FBLN2P98095 1184 aa18.69■□□□□ 0.58
VIL1-205ENST00000454069 RAD54L2Q9Y4B4 1467 aa18.67■□□□□ 0.58
VIL1-205ENST00000454069 ARHGEF11O15085 1522 aa18.67■□□□□ 0.58
VIL1-205ENST00000454069 TDRD9Q8NDG6 1382 aaKnown RBP18.65■□□□□ 0.58
VIL1-205ENST00000454069 FGD5Q6ZNL6 1462 aa18.61■□□□□ 0.57
VIL1-205ENST00000454069 CYB5RLQ6IPT4 315 aa18.61■□□□□ 0.57
VIL1-205ENST00000454069 CHD1O14646 1710 aa18.6■□□□□ 0.57
VIL1-205ENST00000454069 SUPT5HO00267 1087 aaKnown RBP18.58■□□□□ 0.56
VIL1-205ENST00000454069 CUX1P39880 1505 aa18.58■□□□□ 0.56
VIL1-205ENST00000454069 WDR97A6NE52 1622 aa18.57■□□□□ 0.56
VIL1-205ENST00000454069 CHMP7Q8WUX9 453 aaPredicted RBP18.56■□□□□ 0.56
VIL1-205ENST00000454069 SNAPC4Q5SXM2 1469 aa18.53■□□□□ 0.56
VIL1-205ENST00000454069 GRIN2BQ13224 1484 aa18.52■□□□□ 0.55
VIL1-205ENST00000454069 MAGI1Q96QZ7 1491 aaPredicted RBP18.5■□□□□ 0.55
VIL1-205ENST00000454069 ARAP1Q96P48 1450 aa18.48■□□□□ 0.55
VIL1-205ENST00000454069 GAPVD1Q14C86 1478 aa18.45■□□□□ 0.54
VIL1-205ENST00000454069 SYNJ1O43426 1573 aa18.44■□□□□ 0.54
VIL1-205ENST00000454069 SYNJ2O15056 1496 aa18.44■□□□□ 0.54
VIL1-205ENST00000454069 TRHP20396 242 aaPredicted RBP18.43■□□□□ 0.54
VIL1-205ENST00000454069 CLASP1Q7Z460 1538 aa18.42■□□□□ 0.54
VIL1-205ENST00000454069 ABCA10Q8WWZ4 1543 aa18.41■□□□□ 0.54
VIL1-205ENST00000454069 WRNQ14191 1432 aaPredicted RBP eCLIP18.36■□□□□ 0.53
VIL1-205ENST00000454069 PBRM1Q86U86 1689 aa18.36■□□□□ 0.53
VIL1-205ENST00000454069 ABCA5Q8WWZ7 1642 aa18.33■□□□□ 0.52
VIL1-205ENST00000454069 TOP2BQ02880 1626 aa18.28■□□□□ 0.52
VIL1-205ENST00000454069 BIVM-ERCC5R4GMW8 1640 aa18.26■□□□□ 0.51
VIL1-205ENST00000454069 GRIN2AQ12879 1464 aa18.26■□□□□ 0.51
VIL1-205ENST00000454069 FHAD1B1AJZ9 1412 aa18.22■□□□□ 0.51
VIL1-205ENST00000454069 NUP160Q12769 1436 aa18.2■□□□□ 0.5
VIL1-205ENST00000454069 ADAMTS12P58397 1594 aa18.2■□□□□ 0.5
VIL1-205ENST00000454069 ERICH3Q5RHP9 1530 aa18.18■□□□□ 0.5
VIL1-205ENST00000454069 CEP170Q5SW79 1584 aa18.16■□□□□ 0.5
VIL1-205ENST00000454069 ERCC6L2Q5T890 1561 aa18.12■□□□□ 0.49
VIL1-205ENST00000454069 JPH4Q96JJ6 628 aa18.09■□□□□ 0.49
VIL1-205ENST00000454069 SHROOM2Q13796 1616 aa18.08■□□□□ 0.48
VIL1-205ENST00000454069 PRG4Q92954 1404 aaPredicted RBP18.05■□□□□ 0.48
VIL1-205ENST00000454069 KIF27Q86VH2 1401 aa17.98■□□□□ 0.47
VIL1-205ENST00000454069 IGF1RP08069 1367 aa17.98■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 180.4 ms