RNA–Protein interactions for RNA: ENST00000527144.5

GPAA1-208, Transcript of glycosylphosphatidylinositol anchor attachment 1, humanhuman

TSL 3

Gene GPAA1, Length 767 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPAA1-208ENST00000527144 NISCHQ9Y2I1 1504 aa33.98■■■■□ 3.03
GPAA1-208ENST00000527144 CCDC180Q9P1Z9 1646 aa30.2■■■□□ 2.43
GPAA1-208ENST00000527144 ABCC9O60706 1549 aa29.65■■■□□ 2.34
GPAA1-208ENST00000527144 DCAF8L2P0C7V8 631 aa28.45■■■□□ 2.14
GPAA1-208ENST00000527144 RB1CC1Q8TDY2 1594 aa28.42■■■□□ 2.14
GPAA1-208ENST00000527144 NACADO15069 1562 aa28.37■■■□□ 2.13
GPAA1-208ENST00000527144 ZCCHC6Q5VYS8 1495 aaKnown RBP28.31■■■□□ 2.12
GPAA1-208ENST00000527144 MYO15BQ96JP2 1530 aa28.13■■■□□ 2.09
GPAA1-208ENST00000527144 DCAF1Q9Y4B6 1507 aa28.03■■■□□ 2.08
GPAA1-208ENST00000527144 UNC13AQ9UPW8 1703 aa27.92■■■□□ 2.06
GPAA1-208ENST00000527144 DNAJC5BQ9UF47 199 aa27.9■■■□□ 2.06
GPAA1-208ENST00000527144 PABPN1Q86U42 306 aaKnown RBP eCLIP27.72■■■□□ 2.03
GPAA1-208ENST00000527144 SCRIBQ14160 1630 aa27.67■■■□□ 2.02
GPAA1-208ENST00000527144 BICRAQ9NZM4 1560 aa27.65■■■□□ 2.02
GPAA1-208ENST00000527144 SHROOM4Q9ULL8 1493 aa27.17■■□□□ 1.94
GPAA1-208ENST00000527144 EIF4G1Q04637 1599 aaKnown RBP26.88■■□□□ 1.89
GPAA1-208ENST00000527144 CC2D2AQ9P2K1 1620 aa26.8■■□□□ 1.88
GPAA1-208ENST00000527144 CECR2Q9BXF3 1484 aa26.59■■□□□ 1.85
GPAA1-208ENST00000527144 SMARCA4P51532 1647 aa26.4■■□□□ 1.82
GPAA1-208ENST00000527144 BAZ1AQ9NRL2 1556 aaPredicted RBP26.31■■□□□ 1.8
GPAA1-208ENST00000527144 MROH2BQ7Z745 1585 aa26.24■■□□□ 1.79
GPAA1-208ENST00000527144 ATAD2BQ9ULI0 1458 aa26.23■■□□□ 1.79
GPAA1-208ENST00000527144 NCAPD3P42695 1498 aa26.17■■□□□ 1.78
GPAA1-208ENST00000527144 SMARCA2P51531 1590 aa26.16■■□□□ 1.78
GPAA1-208ENST00000527144 PEG3Q9GZU2 1588 aa26.07■■□□□ 1.76
GPAA1-208ENST00000527144 HMGXB3Q12766 1538 aa26.06■■□□□ 1.76
GPAA1-208ENST00000527144 BAZ1BQ9UIG0 1483 aaKnown RBP26.02■■□□□ 1.76
GPAA1-208ENST00000527144 WIZO95785 1651 aa25.99■■□□□ 1.75
GPAA1-208ENST00000527144 RSF1Q96T23 1441 aaPredicted RBP25.89■■□□□ 1.74
GPAA1-208ENST00000527144 DNAJC5Q9H3Z4 198 aa25.7■■□□□ 1.7
GPAA1-208ENST00000527144 NESP48681 1621 aa25.68■■□□□ 1.7
GPAA1-208ENST00000527144 TOP2AP11388 1531 aaKnown RBP25.64■■□□□ 1.7
GPAA1-208ENST00000527144 ERCC6Q03468 1493 aa25.51■■□□□ 1.67
GPAA1-208ENST00000527144 LAMC3Q9Y6N6 1575 aa25.5■■□□□ 1.67
GPAA1-208ENST00000527144 CADPSQ9ULU8 1353 aa25.42■■□□□ 1.66
GPAA1-208ENST00000527144 KIF21AQ7Z4S6 1674 aa25.39■■□□□ 1.66
GPAA1-208ENST00000527144 CCDC88BA6NC98 1476 aa25.35■■□□□ 1.65
GPAA1-208ENST00000527144 CUX2O14529 1486 aa25.31■■□□□ 1.64
GPAA1-208ENST00000527144 PDS5BQ9NTI5 1447 aa25.29■■□□□ 1.64
GPAA1-208ENST00000527144 SUPT5HO00267 1087 aaKnown RBP25.28■■□□□ 1.64
GPAA1-208ENST00000527144 CFTRP13569 1480 aa25.28■■□□□ 1.64
GPAA1-208ENST00000527144 THOC2Q8NI27 1593 aaKnown RBP25.27■■□□□ 1.64
GPAA1-208ENST00000527144 FANCD2Q9BXW9 1451 aa25.16■■□□□ 1.62
GPAA1-208ENST00000527144 PRDM2Q13029 1718 aa25.15■■□□□ 1.62
GPAA1-208ENST00000527144 CEP164Q9UPV0 1460 aa25.13■■□□□ 1.61
GPAA1-208ENST00000527144 MRC2Q9UBG0 1479 aa25.09■■□□□ 1.61
GPAA1-208ENST00000527144 WDR62O43379 1518 aa25.02■■□□□ 1.6
GPAA1-208ENST00000527144 URB2Q14146 1524 aaKnown RBP24.96■■□□□ 1.59
GPAA1-208ENST00000527144 TOPBP1Q92547 1522 aa24.77■■□□□ 1.56
GPAA1-208ENST00000527144 DNMBPQ6XZF7 1577 aa24.73■■□□□ 1.55
GPAA1-208ENST00000527144 ABCC8Q09428 1581 aa24.66■■□□□ 1.54
GPAA1-208ENST00000527144 TRIM41Q8WV44 630 aa24.62■■□□□ 1.53
GPAA1-208ENST00000527144 CUX1P39880 1505 aa24.61■■□□□ 1.53
GPAA1-208ENST00000527144 IFT140Q96RY7 1462 aa24.58■■□□□ 1.52
GPAA1-208ENST00000527144 POLA1P09884 1462 aaPredicted RBP24.57■■□□□ 1.52
GPAA1-208ENST00000527144 ZNF608Q9ULD9 1512 aaPredicted RBP24.56■■□□□ 1.52
GPAA1-208ENST00000527144 TARBP1Q13395 1621 aaKnown RBP24.52■■□□□ 1.52
GPAA1-208ENST00000527144 FGD5Q6ZNL6 1462 aa24.51■■□□□ 1.51
GPAA1-208ENST00000527144 RAD54L2Q9Y4B4 1467 aa24.51■■□□□ 1.51
GPAA1-208ENST00000527144 EIF4G3O43432 1585 aaKnown RBP24.46■■□□□ 1.51
GPAA1-208ENST00000527144 SOGA1O94964 1423 aa24.44■■□□□ 1.5
GPAA1-208ENST00000527144 SYNJ1O43426 1573 aa24.42■■□□□ 1.5
GPAA1-208ENST00000527144 AQRO60306 1485 aaKnown RBP eCLIP24.4■■□□□ 1.53e-10■■■■■ 43.6
GPAA1-208ENST00000527144 WRNQ14191 1432 aaPredicted RBP eCLIP24.4■■□□□ 1.5
GPAA1-208ENST00000527144 BIVM-ERCC5R4GMW8 1640 aa24.38■■□□□ 1.49
GPAA1-208ENST00000527144 TOP2BQ02880 1626 aa24.36■■□□□ 1.49
GPAA1-208ENST00000527144 WDR97A6NE52 1622 aa24.35■■□□□ 1.49
GPAA1-208ENST00000527144 TDRD9Q8NDG6 1382 aaKnown RBP24.34■■□□□ 1.49
GPAA1-208ENST00000527144 ABCA10Q8WWZ4 1543 aa24.23■■□□□ 1.47
GPAA1-208ENST00000527144 CHD1O14646 1710 aa24.19■■□□□ 1.46
GPAA1-208ENST00000527144 PBRM1Q86U86 1689 aa24.19■■□□□ 1.46
GPAA1-208ENST00000527144 ABCA5Q8WWZ7 1642 aa24.18■■□□□ 1.46
GPAA1-208ENST00000527144 SNAPC4Q5SXM2 1469 aa24.18■■□□□ 1.46
GPAA1-208ENST00000527144 GAPVD1Q14C86 1478 aa24.16■■□□□ 1.46
GPAA1-208ENST00000527144 GRIN2BQ13224 1484 aa24.14■■□□□ 1.46
GPAA1-208ENST00000527144 OSCARQ8IYS5 282 aa24.14■■□□□ 1.45
GPAA1-208ENST00000527144 FBLN2P98095 1184 aa24.09■■□□□ 1.45
GPAA1-208ENST00000527144 MAGI1Q96QZ7 1491 aaPredicted RBP24.07■■□□□ 1.44
GPAA1-208ENST00000527144 SYNJ2O15056 1496 aa23.99■■□□□ 1.43
GPAA1-208ENST00000527144 CHMP7Q8WUX9 453 aaPredicted RBP23.98■■□□□ 1.43
GPAA1-208ENST00000527144 RIMBP3CA6NJZ7 1639 aa23.96■■□□□ 1.43
GPAA1-208ENST00000527144 RIMBP3BA6NNM3 1639 aa23.96■■□□□ 1.43
GPAA1-208ENST00000527144 RIMBP3Q9UFD9 1639 aa23.96■■□□□ 1.43
GPAA1-208ENST00000527144 ADAMTS12P58397 1594 aa23.96■■□□□ 1.43
GPAA1-208ENST00000527144 ERICH3Q5RHP9 1530 aa23.93■■□□□ 1.42
GPAA1-208ENST00000527144 GRIN2AQ12879 1464 aa23.86■■□□□ 1.41
GPAA1-208ENST00000527144 FHAD1B1AJZ9 1412 aa23.85■■□□□ 1.41
GPAA1-208ENST00000527144 KIF27Q86VH2 1401 aa23.85■■□□□ 1.41
GPAA1-208ENST00000527144 CLASP1Q7Z460 1538 aa23.85■■□□□ 1.41
GPAA1-208ENST00000527144 ARHGEF11O15085 1522 aa23.82■■□□□ 1.4
GPAA1-208ENST00000527144 CEP170Q5SW79 1584 aa23.79■■□□□ 1.4
GPAA1-208ENST00000527144 IGF1RP08069 1367 aa23.78■■□□□ 1.4
GPAA1-208ENST00000527144 RUSC2Q8N2Y8 1516 aa23.77■■□□□ 1.4
GPAA1-208ENST00000527144 CUL7Q14999 1698 aa23.73■■□□□ 1.39
GPAA1-208ENST00000527144 NUP160Q12769 1436 aa23.73■■□□□ 1.39
GPAA1-208ENST00000527144 CYB5RLQ6IPT4 315 aa23.68■■□□□ 1.38
GPAA1-208ENST00000527144 CARMIL1Q5VZK9 1371 aa23.65■■□□□ 1.38
GPAA1-208ENST00000527144 ARAP1Q96P48 1450 aa23.64■■□□□ 1.38
GPAA1-208ENST00000527144 ERCC6L2Q5T890 1561 aa23.61■■□□□ 1.37
GPAA1-208ENST00000527144 SHROOM2Q13796 1616 aa23.59■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms