Protein–RNA interactions for Protein: Q9UN70

PCDHGC3, Protocadherin gamma-C3, humanhuman

Predictions only

Length 934 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3Q9UN70 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC25.33■■□□□ 1.65
PCDHGC3Q9UN70 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.64
PCDHGC3Q9UN70 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC25.32■■□□□ 1.64
PCDHGC3Q9UN70 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
PCDHGC3Q9UN70 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
PCDHGC3Q9UN70 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
PCDHGC3Q9UN70 CEBPA-AS1-201ENST00000592982 2198 ntBASIC25.31■■□□□ 1.64
PCDHGC3Q9UN70 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC25.31■■□□□ 1.64
PCDHGC3Q9UN70 SPCS2P3-201ENST00000500401 656 ntBASIC25.31■■□□□ 1.64
PCDHGC3Q9UN70 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC25.31■■□□□ 1.64
PCDHGC3Q9UN70 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC25.31■■□□□ 1.64
PCDHGC3Q9UN70 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC25.31■■□□□ 1.64
PCDHGC3Q9UN70 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC25.31■■□□□ 1.64
PCDHGC3Q9UN70 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
PCDHGC3Q9UN70 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC25.3■■□□□ 1.64
PCDHGC3Q9UN70 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC25.3■■□□□ 1.64
PCDHGC3Q9UN70 LZTS2-201ENST00000370220 5741 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
PCDHGC3Q9UN70 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC25.3■■□□□ 1.64
PCDHGC3Q9UN70 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC25.29■■□□□ 1.64
PCDHGC3Q9UN70 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
PCDHGC3Q9UN70 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC25.29■■□□□ 1.64
PCDHGC3Q9UN70 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
PCDHGC3Q9UN70 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
PCDHGC3Q9UN70 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC25.28■■□□□ 1.64
PCDHGC3Q9UN70 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC25.28■■□□□ 1.64
PCDHGC3Q9UN70 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC25.28■■□□□ 1.64
PCDHGC3Q9UN70 SLC12A2-202ENST00000343225 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC25.27■■□□□ 1.64
PCDHGC3Q9UN70 KRT18P60-201ENST00000312876 1297 ntBASIC25.27■■□□□ 1.64
PCDHGC3Q9UN70 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC25.27■■□□□ 1.64
PCDHGC3Q9UN70 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC25.27■■□□□ 1.64
PCDHGC3Q9UN70 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC25.27■■□□□ 1.64
PCDHGC3Q9UN70 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC25.27■■□□□ 1.64
PCDHGC3Q9UN70 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
PCDHGC3Q9UN70 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC25.26■■□□□ 1.63
PCDHGC3Q9UN70 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
PCDHGC3Q9UN70 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC25.26■■□□□ 1.63
PCDHGC3Q9UN70 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC25.26■■□□□ 1.63
PCDHGC3Q9UN70 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC25.26■■□□□ 1.63
PCDHGC3Q9UN70 NTF6A-201ENST00000591175 560 ntBASIC25.26■■□□□ 1.63
PCDHGC3Q9UN70 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
PCDHGC3Q9UN70 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC25.26■■□□□ 1.63
PCDHGC3Q9UN70 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC25.25■■□□□ 1.63
PCDHGC3Q9UN70 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC25.25■■□□□ 1.63
PCDHGC3Q9UN70 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC25.25■■□□□ 1.63
PCDHGC3Q9UN70 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
PCDHGC3Q9UN70 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC25.25■■□□□ 1.63
PCDHGC3Q9UN70 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC25.25■■□□□ 1.63
PCDHGC3Q9UN70 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
PCDHGC3Q9UN70 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC25.24■■□□□ 1.63
PCDHGC3Q9UN70 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
PCDHGC3Q9UN70 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
PCDHGC3Q9UN70 DUX4L9-201ENST00000449051 1259 ntBASIC25.24■■□□□ 1.63
PCDHGC3Q9UN70 AC018755.3-202ENST00000596210 929 ntBASIC25.24■■□□□ 1.63
PCDHGC3Q9UN70 AC129492.7-201ENST00000622992 756 ntBASIC25.24■■□□□ 1.63
PCDHGC3Q9UN70 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC25.23■■□□□ 1.63
PCDHGC3Q9UN70 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
PCDHGC3Q9UN70 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC25.23■■□□□ 1.63
PCDHGC3Q9UN70 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC25.23■■□□□ 1.63
PCDHGC3Q9UN70 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC25.23■■□□□ 1.63
PCDHGC3Q9UN70 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
PCDHGC3Q9UN70 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
PCDHGC3Q9UN70 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC25.22■■□□□ 1.63
PCDHGC3Q9UN70 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
PCDHGC3Q9UN70 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC25.22■■□□□ 1.63
PCDHGC3Q9UN70 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
PCDHGC3Q9UN70 ARHGEF7-206ENST00000375741 5525 ntTSL 1 (best) BASIC25.21■■□□□ 1.63
PCDHGC3Q9UN70 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
PCDHGC3Q9UN70 SLC6A10P-202ENST00000431994 2058 ntBASIC25.21■■□□□ 1.63
PCDHGC3Q9UN70 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC25.21■■□□□ 1.63
PCDHGC3Q9UN70 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC25.21■■□□□ 1.63
PCDHGC3Q9UN70 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
PCDHGC3Q9UN70 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
PCDHGC3Q9UN70 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.63
PCDHGC3Q9UN70 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.62
PCDHGC3Q9UN70 IDNK-203ENST00000405990 629 ntTSL 2 BASIC25.2■■□□□ 1.62
PCDHGC3Q9UN70 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC25.2■■□□□ 1.62
PCDHGC3Q9UN70 MIR6765-201ENST00000614092 87 ntBASIC25.2■■□□□ 1.62
PCDHGC3Q9UN70 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.62
PCDHGC3Q9UN70 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC25.19■■□□□ 1.62
PCDHGC3Q9UN70 RPS2P7-201ENST00000447334 885 ntBASIC25.19■■□□□ 1.62
PCDHGC3Q9UN70 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
PCDHGC3Q9UN70 AC022211.4-201ENST00000625094 2161 ntBASIC25.18■■□□□ 1.62
PCDHGC3Q9UN70 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
PCDHGC3Q9UN70 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC25.18■■□□□ 1.62
PCDHGC3Q9UN70 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC25.18■■□□□ 1.62
PCDHGC3Q9UN70 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC25.18■■□□□ 1.62
PCDHGC3Q9UN70 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC25.18■■□□□ 1.62
PCDHGC3Q9UN70 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC25.18■■□□□ 1.62
PCDHGC3Q9UN70 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC25.18■■□□□ 1.62
PCDHGC3Q9UN70 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC25.18■■□□□ 1.62
PCDHGC3Q9UN70 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC25.17■■□□□ 1.62
PCDHGC3Q9UN70 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
PCDHGC3Q9UN70 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
PCDHGC3Q9UN70 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC25.17■■□□□ 1.62
PCDHGC3Q9UN70 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC25.17■■□□□ 1.62
PCDHGC3Q9UN70 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
PCDHGC3Q9UN70 AC142381.3-201ENST00000568208 1670 ntBASIC25.17■■□□□ 1.62
PCDHGC3Q9UN70 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
PCDHGC3Q9UN70 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC25.16■■□□□ 1.62
PCDHGC3Q9UN70 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC25.16■■□□□ 1.62
Retrieved 100 of 98,524 protein–RNA pairs in 14.6 ms