Protein–RNA interactions for Protein: Q9BY42

RTFDC1, Protein RTF2 homolog, humanhuman

Predicted RBP Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1Q9BY42 TSPY11P-201ENST00000442607 1045 ntBASIC29.51■■■□□ 2.31
RTFDC1Q9BY42 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC29.51■■■□□ 2.31
RTFDC1Q9BY42 AC092028.1-203ENST00000608262 953 ntBASIC29.51■■■□□ 2.31
RTFDC1Q9BY42 TESK1-206ENST00000620767 2438 ntAPPRIS P1 TSL 5 BASIC29.51■■■□□ 2.31
RTFDC1Q9BY42 C17orf97-201ENST00000360127 1839 ntAPPRIS P2 TSL 1 (best) BASIC29.5■■■□□ 2.31
RTFDC1Q9BY42 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC29.5■■■□□ 2.31
RTFDC1Q9BY42 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC29.5■■■□□ 2.31
RTFDC1Q9BY42 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC29.5■■■□□ 2.31
RTFDC1Q9BY42 BX255925.1-201ENST00000566954 1854 ntBASIC29.5■■■□□ 2.31
RTFDC1Q9BY42 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC29.5■■■□□ 2.31
RTFDC1Q9BY42 ACTR3B-201ENST00000256001 2216 ntAPPRIS P1 TSL 1 (best) BASIC29.49■■■□□ 2.31
RTFDC1Q9BY42 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC29.49■■■□□ 2.31
RTFDC1Q9BY42 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC29.49■■■□□ 2.31
RTFDC1Q9BY42 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC29.49■■■□□ 2.31
RTFDC1Q9BY42 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC29.49■■■□□ 2.31
RTFDC1Q9BY42 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC29.49■■■□□ 2.31
RTFDC1Q9BY42 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC29.49■■■□□ 2.31
RTFDC1Q9BY42 EVC-203ENST00000509451 1960 ntTSL 1 (best) BASIC29.49■■■□□ 2.31
RTFDC1Q9BY42 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC29.49■■■□□ 2.31
RTFDC1Q9BY42 LACTB-201ENST00000261893 1972 ntAPPRIS P1 TSL 1 (best) BASIC29.48■■■□□ 2.31
RTFDC1Q9BY42 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC29.48■■■□□ 2.31
RTFDC1Q9BY42 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC29.48■■■□□ 2.31
RTFDC1Q9BY42 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC29.48■■■□□ 2.31
RTFDC1Q9BY42 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC29.48■■■□□ 2.31
RTFDC1Q9BY42 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC29.48■■■□□ 2.31
RTFDC1Q9BY42 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC29.48■■■□□ 2.31
RTFDC1Q9BY42 COL13A1-213ENST00000520267 2276 ntAPPRIS ALT2 TSL 5 BASIC29.47■■■□□ 2.31
RTFDC1Q9BY42 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC29.47■■■□□ 2.31
RTFDC1Q9BY42 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC29.46■■■□□ 2.31
RTFDC1Q9BY42 MEX3D-201ENST00000402693 2850 ntAPPRIS P2 TSL 1 (best) BASIC29.46■■■□□ 2.31
RTFDC1Q9BY42 AC131281.2-201ENST00000520478 145 ntBASIC29.46■■■□□ 2.31
RTFDC1Q9BY42 AL139246.5-201ENST00000606645 996 ntBASIC29.46■■■□□ 2.31
RTFDC1Q9BY42 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC29.46■■■□□ 2.31
RTFDC1Q9BY42 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC29.46■■■□□ 2.31
RTFDC1Q9BY42 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC29.45■■■□□ 2.31
RTFDC1Q9BY42 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC29.45■■■□□ 2.31
RTFDC1Q9BY42 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC29.45■■■□□ 2.31
RTFDC1Q9BY42 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC29.44■■■□□ 2.3
RTFDC1Q9BY42 MIR4281-201ENST00000580852 62 ntBASIC29.44■■■□□ 2.3
RTFDC1Q9BY42 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC29.44■■■□□ 2.3
RTFDC1Q9BY42 MAPK13-201ENST00000211287 2052 ntAPPRIS P1 TSL 1 (best) BASIC29.43■■■□□ 2.3
RTFDC1Q9BY42 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC29.43■■■□□ 2.3
RTFDC1Q9BY42 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC29.43■■■□□ 2.3
RTFDC1Q9BY42 RPP21-222ENST00000433076 577 ntTSL 2 BASIC29.43■■■□□ 2.3
RTFDC1Q9BY42 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC29.43■■■□□ 2.3
RTFDC1Q9BY42 MNX1-201ENST00000252971 2174 ntAPPRIS P3 TSL 1 (best) BASIC29.43■■■□□ 2.3
RTFDC1Q9BY42 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC29.42■■■□□ 2.3
RTFDC1Q9BY42 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC29.42■■■□□ 2.3
RTFDC1Q9BY42 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC29.42■■■□□ 2.3
RTFDC1Q9BY42 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC29.42■■■□□ 2.3
RTFDC1Q9BY42 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC29.42■■■□□ 2.3
RTFDC1Q9BY42 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC29.42■■■□□ 2.3
RTFDC1Q9BY42 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC29.42■■■□□ 2.3
RTFDC1Q9BY42 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC29.41■■■□□ 2.3
RTFDC1Q9BY42 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC29.41■■■□□ 2.3
RTFDC1Q9BY42 SMARCD3-203ENST00000392811 2018 ntTSL 1 (best) BASIC29.41■■■□□ 2.3
RTFDC1Q9BY42 TRIR-202ENST00000588213 841 ntTSL 3 BASIC29.41■■■□□ 2.3
RTFDC1Q9BY42 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC29.41■■■□□ 2.3
RTFDC1Q9BY42 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC29.41■■■□□ 2.3
RTFDC1Q9BY42 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC29.4■■■□□ 2.3
RTFDC1Q9BY42 AC142472.1-201ENST00000612013 1741 ntBASIC29.4■■■□□ 2.3
RTFDC1Q9BY42 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC29.4■■■□□ 2.3
RTFDC1Q9BY42 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC29.4■■■□□ 2.3
RTFDC1Q9BY42 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC29.4■■■□□ 2.3
RTFDC1Q9BY42 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC29.4■■■□□ 2.3
RTFDC1Q9BY42 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC29.4■■■□□ 2.3
RTFDC1Q9BY42 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC29.39■■■□□ 2.3
RTFDC1Q9BY42 MFSD12-201ENST00000355415 2124 ntAPPRIS P3 TSL 1 (best) BASIC29.39■■■□□ 2.3
RTFDC1Q9BY42 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC29.39■■■□□ 2.3
RTFDC1Q9BY42 SLC16A3-214ENST00000582743 2002 ntAPPRIS P1 TSL 1 (best) BASIC29.39■■■□□ 2.3
RTFDC1Q9BY42 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC29.39■■■□□ 2.3
RTFDC1Q9BY42 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC29.39■■■□□ 2.3
RTFDC1Q9BY42 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC29.39■■■□□ 2.3
RTFDC1Q9BY42 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC29.39■■■□□ 2.3
RTFDC1Q9BY42 GPR75-ASB3-201ENST00000406625 2113 ntAPPRIS P1 TSL 2 BASIC29.38■■■□□ 2.29
RTFDC1Q9BY42 NALT1-201ENST00000429224 738 ntTSL 5 BASIC29.38■■■□□ 2.29
RTFDC1Q9BY42 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC29.38■■■□□ 2.29
RTFDC1Q9BY42 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC29.38■■■□□ 2.29
RTFDC1Q9BY42 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC29.38■■■□□ 2.29
RTFDC1Q9BY42 SERPING1-205ENST00000403558 2231 ntTSL 5 BASIC29.37■■■□□ 2.29
RTFDC1Q9BY42 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC29.37■■■□□ 2.29
RTFDC1Q9BY42 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC29.37■■■□□ 2.29
RTFDC1Q9BY42 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC29.37■■■□□ 2.29
RTFDC1Q9BY42 SRR-208ENST00000576848 588 ntTSL 4 BASIC29.37■■■□□ 2.29
RTFDC1Q9BY42 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC29.36■■■□□ 2.29
RTFDC1Q9BY42 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC29.36■■■□□ 2.29
RTFDC1Q9BY42 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC29.36■■■□□ 2.29
RTFDC1Q9BY42 AL117332.1-201ENST00000622628 974 ntBASIC29.36■■■□□ 2.29
RTFDC1Q9BY42 RALB-208ENST00000631312 311 ntTSL 5 BASIC29.36■■■□□ 2.29
RTFDC1Q9BY42 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC29.36■■■□□ 2.29
RTFDC1Q9BY42 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC29.36■■■□□ 2.29
RTFDC1Q9BY42 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC29.35■■■□□ 2.29
RTFDC1Q9BY42 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC29.35■■■□□ 2.29
RTFDC1Q9BY42 MIR3621-201ENST00000580529 85 ntBASIC29.35■■■□□ 2.29
RTFDC1Q9BY42 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC29.35■■■□□ 2.29
RTFDC1Q9BY42 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC29.34■■■□□ 2.29
RTFDC1Q9BY42 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC29.34■■■□□ 2.29
RTFDC1Q9BY42 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC29.34■■■□□ 2.29
RTFDC1Q9BY42 MAF-201ENST00000326043 2646 ntAPPRIS P3 TSL 1 (best) BASIC29.34■■■□□ 2.29
RTFDC1Q9BY42 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC29.34■■■□□ 2.29
Retrieved 100 of 98,524 protein–RNA pairs in 128.5 ms