Protein–RNA interactions for Protein: Q96QU1

PCDH15, Protocadherin-15, humanhuman

Predictions only

Length 1,955 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH15Q96QU1 ACTR3B-201ENST00000256001 2216 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
PCDH15Q96QU1 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC23.67■■□□□ 1.38
PCDH15Q96QU1 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
PCDH15Q96QU1 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
PCDH15Q96QU1 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
PCDH15Q96QU1 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC23.67■■□□□ 1.38
PCDH15Q96QU1 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC23.67■■□□□ 1.38
PCDH15Q96QU1 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC23.67■■□□□ 1.38
PCDH15Q96QU1 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC23.67■■□□□ 1.38
PCDH15Q96QU1 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC23.67■■□□□ 1.38
PCDH15Q96QU1 TSPY9P-201ENST00000440215 945 ntBASIC23.67■■□□□ 1.38
PCDH15Q96QU1 TSPY11P-201ENST00000442607 1045 ntBASIC23.67■■□□□ 1.38
PCDH15Q96QU1 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC23.67■■□□□ 1.38
PCDH15Q96QU1 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC23.66■■□□□ 1.38
PCDH15Q96QU1 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
PCDH15Q96QU1 SRR-208ENST00000576848 588 ntTSL 4 BASIC23.65■■□□□ 1.38
PCDH15Q96QU1 AL139246.5-201ENST00000606645 996 ntBASIC23.65■■□□□ 1.38
PCDH15Q96QU1 AC092028.1-203ENST00000608262 953 ntBASIC23.65■■□□□ 1.38
PCDH15Q96QU1 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC23.65■■□□□ 1.38
PCDH15Q96QU1 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
PCDH15Q96QU1 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC23.65■■□□□ 1.38
PCDH15Q96QU1 BIN1-204ENST00000348750 2074 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
PCDH15Q96QU1 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC23.65■■□□□ 1.38
PCDH15Q96QU1 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC23.65■■□□□ 1.38
PCDH15Q96QU1 AC110285.6-201ENST00000617652 491 ntBASIC23.65■■□□□ 1.38
PCDH15Q96QU1 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC23.65■■□□□ 1.38
PCDH15Q96QU1 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC23.64■■□□□ 1.38
PCDH15Q96QU1 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC23.64■■□□□ 1.38
PCDH15Q96QU1 AL117332.1-201ENST00000622628 974 ntBASIC23.64■■□□□ 1.38
PCDH15Q96QU1 RALB-208ENST00000631312 311 ntTSL 5 BASIC23.64■■□□□ 1.38
PCDH15Q96QU1 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC23.64■■□□□ 1.37
PCDH15Q96QU1 TCF24-201ENST00000563496 2450 ntAPPRIS P1 TSL 5 BASIC23.64■■□□□ 1.37
PCDH15Q96QU1 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
PCDH15Q96QU1 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC23.63■■□□□ 1.37
PCDH15Q96QU1 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC23.63■■□□□ 1.37
PCDH15Q96QU1 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC23.63■■□□□ 1.37
PCDH15Q96QU1 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
PCDH15Q96QU1 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
PCDH15Q96QU1 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC23.63■■□□□ 1.37
PCDH15Q96QU1 MAPK13-201ENST00000211287 2052 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
PCDH15Q96QU1 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
PCDH15Q96QU1 SERPING1-205ENST00000403558 2231 ntTSL 5 BASIC23.62■■□□□ 1.37
PCDH15Q96QU1 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC23.62■■□□□ 1.37
PCDH15Q96QU1 SENP5-202ENST00000419026 973 ntTSL 3 BASIC23.61■■□□□ 1.37
PCDH15Q96QU1 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC23.61■■□□□ 1.37
PCDH15Q96QU1 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC23.61■■□□□ 1.37
PCDH15Q96QU1 SMARCD3-203ENST00000392811 2018 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
PCDH15Q96QU1 PXDC1-202ENST00000380283 2190 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
PCDH15Q96QU1 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC23.61■■□□□ 1.37
PCDH15Q96QU1 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
PCDH15Q96QU1 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC23.61■■□□□ 1.37
PCDH15Q96QU1 NALT1-201ENST00000429224 738 ntTSL 5 BASIC23.61■■□□□ 1.37
PCDH15Q96QU1 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC23.6■■□□□ 1.37
PCDH15Q96QU1 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC23.6■■□□□ 1.37
PCDH15Q96QU1 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC23.6■■□□□ 1.37
PCDH15Q96QU1 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC23.6■■□□□ 1.37
PCDH15Q96QU1 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC23.6■■□□□ 1.37
PCDH15Q96QU1 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC23.6■■□□□ 1.37
PCDH15Q96QU1 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC23.6■■□□□ 1.37
PCDH15Q96QU1 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
PCDH15Q96QU1 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC23.6■■□□□ 1.37
PCDH15Q96QU1 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC23.59■■□□□ 1.37
PCDH15Q96QU1 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC23.59■■□□□ 1.37
PCDH15Q96QU1 AL136116.3-201ENST00000402907 1138 ntBASIC23.59■■□□□ 1.37
PCDH15Q96QU1 RPP21-222ENST00000433076 577 ntTSL 2 BASIC23.59■■□□□ 1.37
PCDH15Q96QU1 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
PCDH15Q96QU1 MNX1-201ENST00000252971 2174 ntAPPRIS P3 TSL 1 (best) BASIC23.58■■□□□ 1.37
PCDH15Q96QU1 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC23.58■■□□□ 1.37
PCDH15Q96QU1 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC23.58■■□□□ 1.37
PCDH15Q96QU1 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC23.58■■□□□ 1.37
PCDH15Q96QU1 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC23.58■■□□□ 1.36
PCDH15Q96QU1 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC23.58■■□□□ 1.36
PCDH15Q96QU1 SLC16A3-214ENST00000582743 2002 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.36
PCDH15Q96QU1 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC23.57■■□□□ 1.36
PCDH15Q96QU1 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
PCDH15Q96QU1 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC23.57■■□□□ 1.36
PCDH15Q96QU1 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC23.57■■□□□ 1.36
PCDH15Q96QU1 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
PCDH15Q96QU1 FEV-201ENST00000295727 1879 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
PCDH15Q96QU1 LACTB-201ENST00000261893 1972 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
PCDH15Q96QU1 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
PCDH15Q96QU1 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC23.56■■□□□ 1.36
PCDH15Q96QU1 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC23.56■■□□□ 1.36
PCDH15Q96QU1 SHF-206ENST00000560471 2499 ntTSL 5 BASIC23.56■■□□□ 1.36
PCDH15Q96QU1 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC23.56■■□□□ 1.36
PCDH15Q96QU1 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC23.55■■□□□ 1.36
PCDH15Q96QU1 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC23.55■■□□□ 1.36
PCDH15Q96QU1 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC23.55■■□□□ 1.36
PCDH15Q96QU1 MIR3621-201ENST00000580529 85 ntBASIC23.55■■□□□ 1.36
PCDH15Q96QU1 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC23.55■■□□□ 1.36
PCDH15Q96QU1 MIR4466-201ENST00000606121 54 ntBASIC23.55■■□□□ 1.36
PCDH15Q96QU1 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
PCDH15Q96QU1 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC23.55■■□□□ 1.36
PCDH15Q96QU1 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC23.55■■□□□ 1.36
PCDH15Q96QU1 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC23.55■■□□□ 1.36
PCDH15Q96QU1 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC23.55■■□□□ 1.36
PCDH15Q96QU1 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC23.54■■□□□ 1.36
PCDH15Q96QU1 QDPR-206ENST00000508623 601 ntTSL 3 BASIC23.54■■□□□ 1.36
PCDH15Q96QU1 AL512631.2-201ENST00000604634 923 ntBASIC23.54■■□□□ 1.36
PCDH15Q96QU1 MIR6724-1-201ENST00000616420 92 ntBASIC23.54■■□□□ 1.36
Retrieved 100 of 98,524 protein–RNA pairs in 13.6 ms