Protein–RNA interactions for Protein: Q92617

NPIPB3, Nuclear pore complex-interacting protein family member B3, humanhuman

Predictions only

Length 1,050 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB3Q92617 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
NPIPB3Q92617 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
NPIPB3Q92617 AC097639.1-201ENST00000565519 1891 ntBASIC18.75■□□□□ 0.59
NPIPB3Q92617 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
NPIPB3Q92617 THRA-202ENST00000394121 2260 ntTSL 2 BASIC18.74■□□□□ 0.59
NPIPB3Q92617 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC18.74■□□□□ 0.59
NPIPB3Q92617 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
NPIPB3Q92617 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
NPIPB3Q92617 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
NPIPB3Q92617 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
NPIPB3Q92617 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
NPIPB3Q92617 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC18.73■□□□□ 0.59
NPIPB3Q92617 MACF1-219ENST00000484793 834 ntTSL 2 BASIC18.73■□□□□ 0.59
NPIPB3Q92617 AC016575.1-201ENST00000607026 382 ntBASIC18.73■□□□□ 0.59
NPIPB3Q92617 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
NPIPB3Q92617 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
NPIPB3Q92617 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC18.73■□□□□ 0.59
NPIPB3Q92617 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
NPIPB3Q92617 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
NPIPB3Q92617 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
NPIPB3Q92617 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
NPIPB3Q92617 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC18.72■□□□□ 0.59
NPIPB3Q92617 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
NPIPB3Q92617 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
NPIPB3Q92617 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
NPIPB3Q92617 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
NPIPB3Q92617 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
NPIPB3Q92617 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC18.71■□□□□ 0.59
NPIPB3Q92617 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
NPIPB3Q92617 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
NPIPB3Q92617 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
NPIPB3Q92617 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
NPIPB3Q92617 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
NPIPB3Q92617 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
NPIPB3Q92617 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
NPIPB3Q92617 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
NPIPB3Q92617 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
NPIPB3Q92617 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
NPIPB3Q92617 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
NPIPB3Q92617 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
NPIPB3Q92617 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
NPIPB3Q92617 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
NPIPB3Q92617 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC18.69■□□□□ 0.58
NPIPB3Q92617 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
NPIPB3Q92617 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
NPIPB3Q92617 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
NPIPB3Q92617 SLC6A10P-202ENST00000431994 2058 ntBASIC18.69■□□□□ 0.58
NPIPB3Q92617 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC18.68■□□□□ 0.58
NPIPB3Q92617 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
NPIPB3Q92617 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
NPIPB3Q92617 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC18.68■□□□□ 0.58
NPIPB3Q92617 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC18.68■□□□□ 0.58
NPIPB3Q92617 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC18.68■□□□□ 0.58
NPIPB3Q92617 AP003733.4-201ENST00000623785 1697 ntBASIC18.68■□□□□ 0.58
NPIPB3Q92617 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
NPIPB3Q92617 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC18.68■□□□□ 0.58
NPIPB3Q92617 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
NPIPB3Q92617 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC18.67■□□□□ 0.58
NPIPB3Q92617 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
NPIPB3Q92617 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
NPIPB3Q92617 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
NPIPB3Q92617 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
NPIPB3Q92617 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
NPIPB3Q92617 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC18.67■□□□□ 0.58
NPIPB3Q92617 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
NPIPB3Q92617 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
NPIPB3Q92617 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
NPIPB3Q92617 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
NPIPB3Q92617 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
NPIPB3Q92617 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
NPIPB3Q92617 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
NPIPB3Q92617 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
NPIPB3Q92617 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC18.66■□□□□ 0.58
NPIPB3Q92617 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC18.66■□□□□ 0.58
NPIPB3Q92617 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
NPIPB3Q92617 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
NPIPB3Q92617 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
NPIPB3Q92617 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
NPIPB3Q92617 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
NPIPB3Q92617 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
NPIPB3Q92617 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
NPIPB3Q92617 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
NPIPB3Q92617 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
NPIPB3Q92617 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
NPIPB3Q92617 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC18.65■□□□□ 0.58
NPIPB3Q92617 LINC01124-201ENST00000409786 2117 ntBASIC18.65■□□□□ 0.58
NPIPB3Q92617 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
NPIPB3Q92617 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC18.64■□□□□ 0.58
NPIPB3Q92617 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
NPIPB3Q92617 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC18.64■□□□□ 0.58
NPIPB3Q92617 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC18.64■□□□□ 0.58
NPIPB3Q92617 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
NPIPB3Q92617 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
NPIPB3Q92617 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
NPIPB3Q92617 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
NPIPB3Q92617 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC18.64■□□□□ 0.57
NPIPB3Q92617 PFN2-211ENST00000489155 636 ntTSL 4 BASIC18.64■□□□□ 0.57
NPIPB3Q92617 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC18.64■□□□□ 0.57
NPIPB3Q92617 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
NPIPB3Q92617 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 172.6 ms