Protein–RNA interactions for Protein: Q8TAQ2

SMARCC2, SWI/SNF complex subunit SMARCC2, humanhuman

Predictions only

Length 1,214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2Q8TAQ2 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC28.05■■■□□ 2.08
SMARCC2Q8TAQ2 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC28.05■■■□□ 2.08
SMARCC2Q8TAQ2 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC28.05■■■□□ 2.08
SMARCC2Q8TAQ2 AL592293.1-201ENST00000502889 1188 ntBASIC28.05■■■□□ 2.08
SMARCC2Q8TAQ2 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC28.05■■■□□ 2.08
SMARCC2Q8TAQ2 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC28.04■■■□□ 2.08
SMARCC2Q8TAQ2 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC28.04■■■□□ 2.08
SMARCC2Q8TAQ2 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC28.04■■■□□ 2.08
SMARCC2Q8TAQ2 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC28.04■■■□□ 2.08
SMARCC2Q8TAQ2 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC28.04■■■□□ 2.08
SMARCC2Q8TAQ2 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC28.03■■■□□ 2.08
SMARCC2Q8TAQ2 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC28.03■■■□□ 2.08
SMARCC2Q8TAQ2 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC28.02■■■□□ 2.08
SMARCC2Q8TAQ2 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC28.02■■■□□ 2.08
SMARCC2Q8TAQ2 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC28.02■■■□□ 2.08
SMARCC2Q8TAQ2 RAP2CP1-202ENST00000605179 643 ntBASIC28.02■■■□□ 2.08
SMARCC2Q8TAQ2 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC28.02■■■□□ 2.08
SMARCC2Q8TAQ2 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC28.01■■■□□ 2.07
SMARCC2Q8TAQ2 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC28.01■■■□□ 2.07
SMARCC2Q8TAQ2 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC28.01■■■□□ 2.07
SMARCC2Q8TAQ2 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC28.01■■■□□ 2.07
SMARCC2Q8TAQ2 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC28.01■■■□□ 2.07
SMARCC2Q8TAQ2 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC28.01■■■□□ 2.07
SMARCC2Q8TAQ2 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC28.01■■■□□ 2.07
SMARCC2Q8TAQ2 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC28■■■□□ 2.07
SMARCC2Q8TAQ2 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC28■■■□□ 2.07
SMARCC2Q8TAQ2 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC28■■■□□ 2.07
SMARCC2Q8TAQ2 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC28■■■□□ 2.07
SMARCC2Q8TAQ2 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC28■■■□□ 2.07
SMARCC2Q8TAQ2 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC27.99■■■□□ 2.07
SMARCC2Q8TAQ2 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC27.99■■■□□ 2.07
SMARCC2Q8TAQ2 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC27.99■■■□□ 2.07
SMARCC2Q8TAQ2 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC27.99■■■□□ 2.07
SMARCC2Q8TAQ2 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC27.99■■■□□ 2.07
SMARCC2Q8TAQ2 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC27.99■■■□□ 2.07
SMARCC2Q8TAQ2 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC27.98■■■□□ 2.07
SMARCC2Q8TAQ2 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC27.98■■■□□ 2.07
SMARCC2Q8TAQ2 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC27.98■■■□□ 2.07
SMARCC2Q8TAQ2 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC27.98■■■□□ 2.07
SMARCC2Q8TAQ2 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC27.97■■■□□ 2.07
SMARCC2Q8TAQ2 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC27.97■■■□□ 2.07
SMARCC2Q8TAQ2 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC27.97■■■□□ 2.07
SMARCC2Q8TAQ2 TMEM120A-214ENST00000493111 1456 ntAPPRIS P1 TSL 1 (best) BASIC27.96■■■□□ 2.07
SMARCC2Q8TAQ2 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC27.96■■■□□ 2.07
SMARCC2Q8TAQ2 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC27.96■■■□□ 2.07
SMARCC2Q8TAQ2 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC27.96■■■□□ 2.07
SMARCC2Q8TAQ2 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC27.96■■■□□ 2.07
SMARCC2Q8TAQ2 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC27.96■■■□□ 2.07
SMARCC2Q8TAQ2 AC129492.7-201ENST00000622992 756 ntBASIC27.96■■■□□ 2.07
SMARCC2Q8TAQ2 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC27.96■■■□□ 2.07
SMARCC2Q8TAQ2 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC27.95■■■□□ 2.07
SMARCC2Q8TAQ2 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC27.95■■■□□ 2.07
SMARCC2Q8TAQ2 AC004987.1-201ENST00000428627 508 ntBASIC27.95■■■□□ 2.06
SMARCC2Q8TAQ2 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC27.95■■■□□ 2.06
SMARCC2Q8TAQ2 AL033527.3-201ENST00000566366 1196 ntBASIC27.95■■■□□ 2.06
SMARCC2Q8TAQ2 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC27.95■■■□□ 2.06
SMARCC2Q8TAQ2 SNAI3-AS1-204ENST00000567997 2048 ntBASIC27.95■■■□□ 2.06
SMARCC2Q8TAQ2 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC27.94■■■□□ 2.06
SMARCC2Q8TAQ2 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC27.94■■■□□ 2.06
SMARCC2Q8TAQ2 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC27.94■■■□□ 2.06
SMARCC2Q8TAQ2 MED17-227ENST00000640521 2047 ntTSL 5 BASIC27.94■■■□□ 2.06
SMARCC2Q8TAQ2 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC27.94■■■□□ 2.06
SMARCC2Q8TAQ2 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC27.94■■■□□ 2.06
SMARCC2Q8TAQ2 AC022211.4-201ENST00000625094 2161 ntBASIC27.93■■■□□ 2.06
SMARCC2Q8TAQ2 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC27.93■■■□□ 2.06
SMARCC2Q8TAQ2 ATP5G2P3-201ENST00000429083 425 ntBASIC27.93■■■□□ 2.06
SMARCC2Q8TAQ2 AC142381.3-201ENST00000568208 1670 ntBASIC27.93■■■□□ 2.06
SMARCC2Q8TAQ2 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC27.93■■■□□ 2.06
SMARCC2Q8TAQ2 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC27.92■■■□□ 2.06
SMARCC2Q8TAQ2 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC27.92■■■□□ 2.06
SMARCC2Q8TAQ2 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC27.92■■■□□ 2.06
SMARCC2Q8TAQ2 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC27.92■■■□□ 2.06
SMARCC2Q8TAQ2 TSPY13P-201ENST00000338964 914 ntBASIC27.92■■■□□ 2.06
SMARCC2Q8TAQ2 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC27.92■■■□□ 2.06
SMARCC2Q8TAQ2 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC27.92■■■□□ 2.06
SMARCC2Q8TAQ2 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC27.92■■■□□ 2.06
SMARCC2Q8TAQ2 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC27.91■■■□□ 2.06
SMARCC2Q8TAQ2 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC27.91■■■□□ 2.06
SMARCC2Q8TAQ2 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC27.91■■■□□ 2.06
SMARCC2Q8TAQ2 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC27.91■■■□□ 2.06
SMARCC2Q8TAQ2 AC097639.1-201ENST00000565519 1891 ntBASIC27.9■■■□□ 2.06
SMARCC2Q8TAQ2 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC27.9■■■□□ 2.06
SMARCC2Q8TAQ2 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC27.9■■■□□ 2.06
SMARCC2Q8TAQ2 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC27.89■■■□□ 2.06
SMARCC2Q8TAQ2 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC27.89■■■□□ 2.06
SMARCC2Q8TAQ2 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC27.88■■■□□ 2.05
SMARCC2Q8TAQ2 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC27.88■■■□□ 2.05
SMARCC2Q8TAQ2 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC27.88■■■□□ 2.05
SMARCC2Q8TAQ2 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC27.88■■■□□ 2.05
SMARCC2Q8TAQ2 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC27.88■■■□□ 2.05
SMARCC2Q8TAQ2 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC27.88■■■□□ 2.05
SMARCC2Q8TAQ2 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC27.87■■■□□ 2.05
SMARCC2Q8TAQ2 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC27.87■■■□□ 2.05
SMARCC2Q8TAQ2 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC27.87■■■□□ 2.05
SMARCC2Q8TAQ2 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC27.87■■■□□ 2.05
SMARCC2Q8TAQ2 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC27.86■■■□□ 2.05
SMARCC2Q8TAQ2 AC138932.3-201ENST00000567634 1902 ntBASIC27.86■■■□□ 2.05
SMARCC2Q8TAQ2 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC27.86■■■□□ 2.05
SMARCC2Q8TAQ2 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC27.86■■■□□ 2.05
SMARCC2Q8TAQ2 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC27.86■■■□□ 2.05
Retrieved 100 of 98,524 protein–RNA pairs in 8.5 ms