Protein–RNA interactions for Protein: Q8N5M4

TTC9C, Tetratricopeptide repeat protein 9C, humanhuman

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC9CQ8N5M4 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
TTC9CQ8N5M4 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
TTC9CQ8N5M4 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
TTC9CQ8N5M4 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
TTC9CQ8N5M4 HES4-204ENST00000484667 667 ntTSL 3 BASIC18.83■□□□□ 0.6
TTC9CQ8N5M4 HSD17B1P1-201ENST00000590052 955 ntBASIC18.83■□□□□ 0.6
TTC9CQ8N5M4 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC18.83■□□□□ 0.6
TTC9CQ8N5M4 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
TTC9CQ8N5M4 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
TTC9CQ8N5M4 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
TTC9CQ8N5M4 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TTC9CQ8N5M4 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TTC9CQ8N5M4 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TTC9CQ8N5M4 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
TTC9CQ8N5M4 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
TTC9CQ8N5M4 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TTC9CQ8N5M4 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
TTC9CQ8N5M4 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TTC9CQ8N5M4 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TTC9CQ8N5M4 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC18.81■□□□□ 0.6
TTC9CQ8N5M4 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TTC9CQ8N5M4 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
TTC9CQ8N5M4 AC133552.2-201ENST00000619106 1032 ntBASIC18.81■□□□□ 0.6
TTC9CQ8N5M4 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC18.81■□□□□ 0.6
TTC9CQ8N5M4 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TTC9CQ8N5M4 RASL10A-201ENST00000216101 1490 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TTC9CQ8N5M4 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
TTC9CQ8N5M4 KRT18P10-201ENST00000388836 1287 ntBASIC18.8■□□□□ 0.6
TTC9CQ8N5M4 RARRES2P2-201ENST00000394842 485 ntBASIC18.8■□□□□ 0.6
TTC9CQ8N5M4 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
TTC9CQ8N5M4 CEBPA-AS1-201ENST00000592982 2198 ntBASIC18.8■□□□□ 0.6
TTC9CQ8N5M4 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC18.8■□□□□ 0.6
TTC9CQ8N5M4 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC18.8■□□□□ 0.6
TTC9CQ8N5M4 AC009831.1-201ENST00000580420 1582 ntBASIC18.8■□□□□ 0.6
TTC9CQ8N5M4 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC18.8■□□□□ 0.6
TTC9CQ8N5M4 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
TTC9CQ8N5M4 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
TTC9CQ8N5M4 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
TTC9CQ8N5M4 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
TTC9CQ8N5M4 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC18.79■□□□□ 0.6
TTC9CQ8N5M4 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC18.79■□□□□ 0.6
TTC9CQ8N5M4 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
TTC9CQ8N5M4 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
TTC9CQ8N5M4 TMEM120A-214ENST00000493111 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
TTC9CQ8N5M4 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
TTC9CQ8N5M4 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
TTC9CQ8N5M4 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
TTC9CQ8N5M4 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
TTC9CQ8N5M4 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC18.77■□□□□ 0.6
TTC9CQ8N5M4 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC18.77■□□□□ 0.6
TTC9CQ8N5M4 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
TTC9CQ8N5M4 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
TTC9CQ8N5M4 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC18.77■□□□□ 0.6
TTC9CQ8N5M4 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
TTC9CQ8N5M4 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
TTC9CQ8N5M4 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
TTC9CQ8N5M4 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC18.77■□□□□ 0.6
TTC9CQ8N5M4 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
TTC9CQ8N5M4 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
TTC9CQ8N5M4 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
TTC9CQ8N5M4 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
TTC9CQ8N5M4 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
TTC9CQ8N5M4 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
TTC9CQ8N5M4 HYI-213ENST00000583037 1322 ntTSL 5 BASIC18.75■□□□□ 0.59
TTC9CQ8N5M4 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
TTC9CQ8N5M4 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
TTC9CQ8N5M4 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC18.75■□□□□ 0.59
TTC9CQ8N5M4 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
TTC9CQ8N5M4 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC18.75■□□□□ 0.59
TTC9CQ8N5M4 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
TTC9CQ8N5M4 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
TTC9CQ8N5M4 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC18.75■□□□□ 0.59
TTC9CQ8N5M4 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
TTC9CQ8N5M4 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC18.74■□□□□ 0.59
TTC9CQ8N5M4 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
TTC9CQ8N5M4 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
TTC9CQ8N5M4 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
TTC9CQ8N5M4 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
TTC9CQ8N5M4 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
TTC9CQ8N5M4 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
TTC9CQ8N5M4 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC18.73■□□□□ 0.59
TTC9CQ8N5M4 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
TTC9CQ8N5M4 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
TTC9CQ8N5M4 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
TTC9CQ8N5M4 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
TTC9CQ8N5M4 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
TTC9CQ8N5M4 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
TTC9CQ8N5M4 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
TTC9CQ8N5M4 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
TTC9CQ8N5M4 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC18.72■□□□□ 0.59
TTC9CQ8N5M4 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
TTC9CQ8N5M4 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
TTC9CQ8N5M4 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC18.72■□□□□ 0.59
TTC9CQ8N5M4 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC18.71■□□□□ 0.59
TTC9CQ8N5M4 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
TTC9CQ8N5M4 AC142381.3-201ENST00000568208 1670 ntBASIC18.71■□□□□ 0.59
TTC9CQ8N5M4 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
TTC9CQ8N5M4 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC18.71■□□□□ 0.59
TTC9CQ8N5M4 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC18.71■□□□□ 0.59
TTC9CQ8N5M4 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC18.71■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 64.5 ms