Protein–RNA interactions for Protein: Q8IV50

LYSMD2, LysM and putative peptidoglycan-binding domain-containing protein 2, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD2Q8IV50 LINC00565-201ENST00000562710 2331 ntBASIC20.96■□□□□ 0.95
LYSMD2Q8IV50 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
LYSMD2Q8IV50 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
LYSMD2Q8IV50 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
LYSMD2Q8IV50 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
LYSMD2Q8IV50 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
LYSMD2Q8IV50 AP003733.4-201ENST00000623785 1697 ntBASIC20.96■□□□□ 0.95
LYSMD2Q8IV50 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
LYSMD2Q8IV50 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC20.95■□□□□ 0.94
LYSMD2Q8IV50 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
LYSMD2Q8IV50 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
LYSMD2Q8IV50 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC20.95■□□□□ 0.94
LYSMD2Q8IV50 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
LYSMD2Q8IV50 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
LYSMD2Q8IV50 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
LYSMD2Q8IV50 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
LYSMD2Q8IV50 DUSP15-202ENST00000339738 1454 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
LYSMD2Q8IV50 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC20.94■□□□□ 0.94
LYSMD2Q8IV50 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
LYSMD2Q8IV50 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
LYSMD2Q8IV50 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
LYSMD2Q8IV50 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC20.94■□□□□ 0.94
LYSMD2Q8IV50 MISP3-201ENST00000269720 1424 ntAPPRIS ALT2 TSL 5 BASIC20.94■□□□□ 0.94
LYSMD2Q8IV50 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
LYSMD2Q8IV50 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC20.93■□□□□ 0.94
LYSMD2Q8IV50 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
LYSMD2Q8IV50 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
LYSMD2Q8IV50 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC20.93■□□□□ 0.94
LYSMD2Q8IV50 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
LYSMD2Q8IV50 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC20.93■□□□□ 0.94
LYSMD2Q8IV50 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC20.93■□□□□ 0.94
LYSMD2Q8IV50 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
LYSMD2Q8IV50 STK25-234ENST00000535007 2459 ntTSL 2 BASIC20.92■□□□□ 0.94
LYSMD2Q8IV50 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
LYSMD2Q8IV50 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
LYSMD2Q8IV50 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
LYSMD2Q8IV50 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
LYSMD2Q8IV50 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
LYSMD2Q8IV50 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
LYSMD2Q8IV50 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
LYSMD2Q8IV50 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
LYSMD2Q8IV50 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
LYSMD2Q8IV50 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC20.91■□□□□ 0.94
LYSMD2Q8IV50 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
LYSMD2Q8IV50 GTF3C4-202ENST00000483873 1417 ntTSL 3 BASIC20.91■□□□□ 0.94
LYSMD2Q8IV50 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC20.91■□□□□ 0.94
LYSMD2Q8IV50 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
LYSMD2Q8IV50 USP48-205ENST00000421625 2818 ntTSL 2 BASIC20.9■□□□□ 0.94
LYSMD2Q8IV50 LRRC75B-201ENST00000318753 1238 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
LYSMD2Q8IV50 NADK2-210ENST00000514504 1233 ntTSL 5 BASIC20.9■□□□□ 0.94
LYSMD2Q8IV50 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC20.9■□□□□ 0.94
LYSMD2Q8IV50 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
LYSMD2Q8IV50 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
LYSMD2Q8IV50 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
LYSMD2Q8IV50 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC20.89■□□□□ 0.94
LYSMD2Q8IV50 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
LYSMD2Q8IV50 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.94
LYSMD2Q8IV50 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.93
LYSMD2Q8IV50 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
LYSMD2Q8IV50 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
LYSMD2Q8IV50 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
LYSMD2Q8IV50 EFS-203ENST00000429593 2610 ntTSL 2 BASIC20.89■□□□□ 0.93
LYSMD2Q8IV50 AC006486.1-201ENST00000594664 634 ntAPPRIS P1 TSL 3 BASIC20.89■□□□□ 0.93
LYSMD2Q8IV50 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
LYSMD2Q8IV50 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
LYSMD2Q8IV50 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
LYSMD2Q8IV50 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
LYSMD2Q8IV50 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
LYSMD2Q8IV50 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.93
LYSMD2Q8IV50 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC20.89■□□□□ 0.93
LYSMD2Q8IV50 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
LYSMD2Q8IV50 EP400NL-214ENST00000641289 2402 ntBASIC20.88■□□□□ 0.93
LYSMD2Q8IV50 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
LYSMD2Q8IV50 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC20.88■□□□□ 0.93
LYSMD2Q8IV50 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC20.88■□□□□ 0.93
LYSMD2Q8IV50 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
LYSMD2Q8IV50 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
LYSMD2Q8IV50 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC20.88■□□□□ 0.93
LYSMD2Q8IV50 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
LYSMD2Q8IV50 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
LYSMD2Q8IV50 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
LYSMD2Q8IV50 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
LYSMD2Q8IV50 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
LYSMD2Q8IV50 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
LYSMD2Q8IV50 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
LYSMD2Q8IV50 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC20.87■□□□□ 0.93
LYSMD2Q8IV50 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
LYSMD2Q8IV50 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
LYSMD2Q8IV50 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
LYSMD2Q8IV50 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC20.87■□□□□ 0.93
LYSMD2Q8IV50 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
LYSMD2Q8IV50 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
LYSMD2Q8IV50 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
LYSMD2Q8IV50 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
LYSMD2Q8IV50 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC20.86■□□□□ 0.93
LYSMD2Q8IV50 GALC-202ENST00000393568 2054 ntTSL 2 BASIC20.86■□□□□ 0.93
LYSMD2Q8IV50 MIR762-201ENST00000390236 83 ntBASIC20.86■□□□□ 0.93
LYSMD2Q8IV50 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
LYSMD2Q8IV50 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
LYSMD2Q8IV50 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 17.5 ms