Protein–RNA interactions for Protein: Q5XG99

LYSMD4, LysM and putative peptidoglycan-binding domain-containing protein 4, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4Q5XG99 ST7-208ENST00000393451 2110 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
LYSMD4Q5XG99 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
LYSMD4Q5XG99 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC23.77■■□□□ 1.4
LYSMD4Q5XG99 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC23.77■■□□□ 1.4
LYSMD4Q5XG99 GLTP-201ENST00000318348 2356 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
LYSMD4Q5XG99 RCC1L-202ENST00000614461 2419 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
LYSMD4Q5XG99 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC23.76■■□□□ 1.39
LYSMD4Q5XG99 SEPT3-203ENST00000396426 2586 ntAPPRIS P4 TSL 1 (best) BASIC23.76■■□□□ 1.39
LYSMD4Q5XG99 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
LYSMD4Q5XG99 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC23.76■■□□□ 1.39
LYSMD4Q5XG99 AL136116.3-201ENST00000402907 1138 ntBASIC23.76■■□□□ 1.39
LYSMD4Q5XG99 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
LYSMD4Q5XG99 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC23.76■■□□□ 1.39
LYSMD4Q5XG99 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
LYSMD4Q5XG99 DRD5P2-201ENST00000421395 2012 ntBASIC23.76■■□□□ 1.39
LYSMD4Q5XG99 LINC01003-201ENST00000564834 1764 ntBASIC23.75■■□□□ 1.39
LYSMD4Q5XG99 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC23.75■■□□□ 1.39
LYSMD4Q5XG99 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
LYSMD4Q5XG99 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
LYSMD4Q5XG99 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC23.75■■□□□ 1.39
LYSMD4Q5XG99 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC23.75■■□□□ 1.39
LYSMD4Q5XG99 AC010997.5-201ENST00000609182 354 ntBASIC23.75■■□□□ 1.39
LYSMD4Q5XG99 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
LYSMD4Q5XG99 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC23.74■■□□□ 1.39
LYSMD4Q5XG99 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC23.74■■□□□ 1.39
LYSMD4Q5XG99 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
LYSMD4Q5XG99 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC23.74■■□□□ 1.39
LYSMD4Q5XG99 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
LYSMD4Q5XG99 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
LYSMD4Q5XG99 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC23.73■■□□□ 1.39
LYSMD4Q5XG99 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC23.73■■□□□ 1.39
LYSMD4Q5XG99 MTDHP2-201ENST00000601468 714 ntBASIC23.73■■□□□ 1.39
LYSMD4Q5XG99 AL117332.1-201ENST00000622628 974 ntBASIC23.73■■□□□ 1.39
LYSMD4Q5XG99 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC23.73■■□□□ 1.39
LYSMD4Q5XG99 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC23.73■■□□□ 1.39
LYSMD4Q5XG99 AC142472.1-201ENST00000612013 1741 ntBASIC23.73■■□□□ 1.39
LYSMD4Q5XG99 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC23.72■■□□□ 1.39
LYSMD4Q5XG99 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC23.72■■□□□ 1.39
LYSMD4Q5XG99 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC23.72■■□□□ 1.39
LYSMD4Q5XG99 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC23.72■■□□□ 1.39
LYSMD4Q5XG99 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC23.72■■□□□ 1.39
LYSMD4Q5XG99 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
LYSMD4Q5XG99 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC23.71■■□□□ 1.39
LYSMD4Q5XG99 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC23.71■■□□□ 1.39
LYSMD4Q5XG99 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC23.71■■□□□ 1.39
LYSMD4Q5XG99 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
LYSMD4Q5XG99 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.39
LYSMD4Q5XG99 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC23.7■■□□□ 1.38
LYSMD4Q5XG99 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC23.7■■□□□ 1.38
LYSMD4Q5XG99 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC23.7■■□□□ 1.38
LYSMD4Q5XG99 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC23.7■■□□□ 1.38
LYSMD4Q5XG99 MIR6724-1-201ENST00000616420 92 ntBASIC23.7■■□□□ 1.38
LYSMD4Q5XG99 MIR6724-2-201ENST00000616483 92 ntBASIC23.7■■□□□ 1.38
LYSMD4Q5XG99 MIR6724-4-201ENST00000617390 92 ntBASIC23.7■■□□□ 1.38
LYSMD4Q5XG99 MIR6724-3-201ENST00000622482 92 ntBASIC23.7■■□□□ 1.38
LYSMD4Q5XG99 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC23.7■■□□□ 1.38
LYSMD4Q5XG99 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC23.7■■□□□ 1.38
LYSMD4Q5XG99 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC23.7■■□□□ 1.38
LYSMD4Q5XG99 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC23.69■■□□□ 1.38
LYSMD4Q5XG99 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC23.69■■□□□ 1.38
LYSMD4Q5XG99 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
LYSMD4Q5XG99 VEGFC-202ENST00000618562 2064 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
LYSMD4Q5XG99 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC23.69■■□□□ 1.38
LYSMD4Q5XG99 JAG2-201ENST00000331782 5835 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
LYSMD4Q5XG99 ARHGEF7-206ENST00000375741 5525 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
LYSMD4Q5XG99 MIR3621-201ENST00000580529 85 ntBASIC23.69■■□□□ 1.38
LYSMD4Q5XG99 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
LYSMD4Q5XG99 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC23.69■■□□□ 1.38
LYSMD4Q5XG99 IFNGR2-201ENST00000290219 2221 ntAPPRIS P3 TSL 1 (best) BASIC23.69■■□□□ 1.38
LYSMD4Q5XG99 SLC15A4-201ENST00000266771 2779 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
LYSMD4Q5XG99 MFSD12-201ENST00000355415 2124 ntAPPRIS P3 TSL 1 (best) BASIC23.68■■□□□ 1.38
LYSMD4Q5XG99 ST7-205ENST00000393446 2114 ntTSL 5 BASIC23.68■■□□□ 1.38
LYSMD4Q5XG99 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC23.68■■□□□ 1.38
LYSMD4Q5XG99 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC23.67■■□□□ 1.38
LYSMD4Q5XG99 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC23.67■■□□□ 1.38
LYSMD4Q5XG99 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC23.67■■□□□ 1.38
LYSMD4Q5XG99 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC23.67■■□□□ 1.38
LYSMD4Q5XG99 AL356740.2-201ENST00000601559 647 ntBASIC23.67■■□□□ 1.38
LYSMD4Q5XG99 AC011551.1-201ENST00000614101 683 ntBASIC23.67■■□□□ 1.38
LYSMD4Q5XG99 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC23.66■■□□□ 1.38
LYSMD4Q5XG99 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
LYSMD4Q5XG99 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
LYSMD4Q5XG99 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC23.66■■□□□ 1.38
LYSMD4Q5XG99 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
LYSMD4Q5XG99 LZTS2-201ENST00000370220 5741 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
LYSMD4Q5XG99 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
LYSMD4Q5XG99 RNF130-205ENST00000521389 2263 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
LYSMD4Q5XG99 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
LYSMD4Q5XG99 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC23.65■■□□□ 1.38
LYSMD4Q5XG99 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
LYSMD4Q5XG99 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
LYSMD4Q5XG99 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC23.65■■□□□ 1.38
LYSMD4Q5XG99 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC23.65■■□□□ 1.38
LYSMD4Q5XG99 GAK-223ENST00000628912 497 ntTSL 5 BASIC23.65■■□□□ 1.38
LYSMD4Q5XG99 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC23.65■■□□□ 1.38
LYSMD4Q5XG99 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
LYSMD4Q5XG99 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
LYSMD4Q5XG99 C17orf97-201ENST00000360127 1839 ntAPPRIS P2 TSL 1 (best) BASIC23.64■■□□□ 1.38
LYSMD4Q5XG99 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC23.64■■□□□ 1.38
LYSMD4Q5XG99 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC23.64■■□□□ 1.37
Retrieved 100 of 98,524 protein–RNA pairs in 21.3 ms