Protein–RNA interactions for Protein: Q5XG99

LYSMD4, LysM and putative peptidoglycan-binding domain-containing protein 4, humanhuman

Predictions only

Length 296 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4Q5XG99 ST7-208ENST00000393451 2110 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
LYSMD4Q5XG99 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
LYSMD4Q5XG99 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC23.77■■□□□ 1.4
LYSMD4Q5XG99 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC23.77■■□□□ 1.4
LYSMD4Q5XG99 GLTP-201ENST00000318348 2356 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
LYSMD4Q5XG99 RCC1L-202ENST00000614461 2419 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
LYSMD4Q5XG99 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC23.76■■□□□ 1.39
LYSMD4Q5XG99 SEPT3-203ENST00000396426 2586 ntAPPRIS P4 TSL 1 (best) BASIC23.76■■□□□ 1.39
LYSMD4Q5XG99 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
LYSMD4Q5XG99 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC23.76■■□□□ 1.39
LYSMD4Q5XG99 AL136116.3-201ENST00000402907 1138 ntBASIC23.76■■□□□ 1.39
LYSMD4Q5XG99 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
LYSMD4Q5XG99 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC23.76■■□□□ 1.39
LYSMD4Q5XG99 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
LYSMD4Q5XG99 DRD5P2-201ENST00000421395 2012 ntBASIC23.76■■□□□ 1.39
LYSMD4Q5XG99 LINC01003-201ENST00000564834 1764 ntBASIC23.75■■□□□ 1.39
LYSMD4Q5XG99 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC23.75■■□□□ 1.39
LYSMD4Q5XG99 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
LYSMD4Q5XG99 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
LYSMD4Q5XG99 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC23.75■■□□□ 1.39
LYSMD4Q5XG99 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC23.75■■□□□ 1.39
LYSMD4Q5XG99 AC010997.5-201ENST00000609182 354 ntBASIC23.75■■□□□ 1.39
LYSMD4Q5XG99 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
LYSMD4Q5XG99 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC23.74■■□□□ 1.39
LYSMD4Q5XG99 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC23.74■■□□□ 1.39
LYSMD4Q5XG99 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
LYSMD4Q5XG99 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC23.74■■□□□ 1.39
LYSMD4Q5XG99 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
LYSMD4Q5XG99 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
LYSMD4Q5XG99 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC23.73■■□□□ 1.39
LYSMD4Q5XG99 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC23.73■■□□□ 1.39
LYSMD4Q5XG99 MTDHP2-201ENST00000601468 714 ntBASIC23.73■■□□□ 1.39
LYSMD4Q5XG99 AL117332.1-201ENST00000622628 974 ntBASIC23.73■■□□□ 1.39
LYSMD4Q5XG99 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC23.73■■□□□ 1.39
LYSMD4Q5XG99 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC23.73■■□□□ 1.39
LYSMD4Q5XG99 AC142472.1-201ENST00000612013 1741 ntBASIC23.73■■□□□ 1.39
LYSMD4Q5XG99 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC23.72■■□□□ 1.39
LYSMD4Q5XG99 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC23.72■■□□□ 1.39
LYSMD4Q5XG99 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC23.72■■□□□ 1.39
LYSMD4Q5XG99 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC23.72■■□□□ 1.39
LYSMD4Q5XG99 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC23.72■■□□□ 1.39
LYSMD4Q5XG99 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
LYSMD4Q5XG99 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC23.71■■□□□ 1.39
LYSMD4Q5XG99 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC23.71■■□□□ 1.39
LYSMD4Q5XG99 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC23.71■■□□□ 1.39
LYSMD4Q5XG99 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
LYSMD4Q5XG99 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.39
LYSMD4Q5XG99 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC23.7■■□□□ 1.38
LYSMD4Q5XG99 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC23.7■■□□□ 1.38
LYSMD4Q5XG99 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC23.7■■□□□ 1.38
LYSMD4Q5XG99 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC23.7■■□□□ 1.38
LYSMD4Q5XG99 MIR6724-1-201ENST00000616420 92 ntBASIC23.7■■□□□ 1.38
LYSMD4Q5XG99 MIR6724-2-201ENST00000616483 92 ntBASIC23.7■■□□□ 1.38
LYSMD4Q5XG99 MIR6724-4-201ENST00000617390 92 ntBASIC23.7■■□□□ 1.38
LYSMD4Q5XG99 MIR6724-3-201ENST00000622482 92 ntBASIC23.7■■□□□ 1.38
LYSMD4Q5XG99 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC23.7■■□□□ 1.38
LYSMD4Q5XG99 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC23.7■■□□□ 1.38
LYSMD4Q5XG99 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC23.7■■□□□ 1.38
LYSMD4Q5XG99 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC23.69■■□□□ 1.38
LYSMD4Q5XG99 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC23.69■■□□□ 1.38
LYSMD4Q5XG99 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
LYSMD4Q5XG99 VEGFC-202ENST00000618562 2064 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
LYSMD4Q5XG99 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC23.69■■□□□ 1.38
LYSMD4Q5XG99 JAG2-201ENST00000331782 5835 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
LYSMD4Q5XG99 ARHGEF7-206ENST00000375741 5525 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
LYSMD4Q5XG99 MIR3621-201ENST00000580529 85 ntBASIC23.69■■□□□ 1.38
LYSMD4Q5XG99 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
LYSMD4Q5XG99 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC23.69■■□□□ 1.38
LYSMD4Q5XG99 IFNGR2-201ENST00000290219 2221 ntAPPRIS P3 TSL 1 (best) BASIC23.69■■□□□ 1.38
LYSMD4Q5XG99 SLC15A4-201ENST00000266771 2779 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
LYSMD4Q5XG99 MFSD12-201ENST00000355415 2124 ntAPPRIS P3 TSL 1 (best) BASIC23.68■■□□□ 1.38
LYSMD4Q5XG99 ST7-205ENST00000393446 2114 ntTSL 5 BASIC23.68■■□□□ 1.38
LYSMD4Q5XG99 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC23.68■■□□□ 1.38
LYSMD4Q5XG99 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC23.67■■□□□ 1.38
LYSMD4Q5XG99 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC23.67■■□□□ 1.38
LYSMD4Q5XG99 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC23.67■■□□□ 1.38
LYSMD4Q5XG99 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC23.67■■□□□ 1.38
LYSMD4Q5XG99 AL356740.2-201ENST00000601559 647 ntBASIC23.67■■□□□ 1.38
LYSMD4Q5XG99 AC011551.1-201ENST00000614101 683 ntBASIC23.67■■□□□ 1.38
LYSMD4Q5XG99 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC23.66■■□□□ 1.38
LYSMD4Q5XG99 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
LYSMD4Q5XG99 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
LYSMD4Q5XG99 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC23.66■■□□□ 1.38
LYSMD4Q5XG99 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
LYSMD4Q5XG99 LZTS2-201ENST00000370220 5741 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
LYSMD4Q5XG99 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
LYSMD4Q5XG99 RNF130-205ENST00000521389 2263 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
LYSMD4Q5XG99 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
LYSMD4Q5XG99 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC23.65■■□□□ 1.38
LYSMD4Q5XG99 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
LYSMD4Q5XG99 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
LYSMD4Q5XG99 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC23.65■■□□□ 1.38
LYSMD4Q5XG99 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC23.65■■□□□ 1.38
LYSMD4Q5XG99 GAK-223ENST00000628912 497 ntTSL 5 BASIC23.65■■□□□ 1.38
LYSMD4Q5XG99 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC23.65■■□□□ 1.38
LYSMD4Q5XG99 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
LYSMD4Q5XG99 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
LYSMD4Q5XG99 C17orf97-201ENST00000360127 1839 ntAPPRIS P2 TSL 1 (best) BASIC23.64■■□□□ 1.38
LYSMD4Q5XG99 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC23.64■■□□□ 1.38
LYSMD4Q5XG99 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC23.64■■□□□ 1.37
Retrieved 100 of 98,524 protein–RNA pairs in 22.4 ms