Protein–RNA interactions for Protein: P51686

CCR9, C-C chemokine receptor type 9, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCR9P51686 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC20.96■□□□□ 0.95
CCR9P51686 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC20.96■□□□□ 0.95
CCR9P51686 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CCR9P51686 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
CCR9P51686 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
CCR9P51686 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CCR9P51686 AP003733.4-201ENST00000623785 1697 ntBASIC20.96■□□□□ 0.95
CCR9P51686 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC20.95■□□□□ 0.94
CCR9P51686 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC20.95■□□□□ 0.94
CCR9P51686 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CCR9P51686 AC097639.1-201ENST00000565519 1891 ntBASIC20.95■□□□□ 0.94
CCR9P51686 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
CCR9P51686 ZNRF2P2-203ENST00000454624 420 ntBASIC20.95■□□□□ 0.94
CCR9P51686 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
CCR9P51686 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CCR9P51686 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CCR9P51686 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
CCR9P51686 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC20.95■□□□□ 0.94
CCR9P51686 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
CCR9P51686 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
CCR9P51686 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
CCR9P51686 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC20.94■□□□□ 0.94
CCR9P51686 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC20.94■□□□□ 0.94
CCR9P51686 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC20.93■□□□□ 0.94
CCR9P51686 EED-207ENST00000528180 1745 ntTSL 5 BASIC20.93■□□□□ 0.94
CCR9P51686 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
CCR9P51686 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CCR9P51686 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
CCR9P51686 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CCR9P51686 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
CCR9P51686 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CCR9P51686 AC133561.1-201ENST00000568600 2415 ntBASIC20.93■□□□□ 0.94
CCR9P51686 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CCR9P51686 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC20.92■□□□□ 0.94
CCR9P51686 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC20.92■□□□□ 0.94
CCR9P51686 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC20.92■□□□□ 0.94
CCR9P51686 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
CCR9P51686 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CCR9P51686 RNF166-209ENST00000567844 633 ntTSL 5 BASIC20.92■□□□□ 0.94
CCR9P51686 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
CCR9P51686 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
CCR9P51686 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
CCR9P51686 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CCR9P51686 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CCR9P51686 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
CCR9P51686 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC20.91■□□□□ 0.94
CCR9P51686 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
CCR9P51686 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC20.91■□□□□ 0.94
CCR9P51686 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CCR9P51686 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC20.9■□□□□ 0.94
CCR9P51686 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
CCR9P51686 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC20.9■□□□□ 0.94
CCR9P51686 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
CCR9P51686 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CCR9P51686 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
CCR9P51686 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CCR9P51686 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CCR9P51686 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CCR9P51686 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CCR9P51686 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC20.89■□□□□ 0.93
CCR9P51686 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CCR9P51686 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC20.88■□□□□ 0.93
CCR9P51686 AC012676.1-201ENST00000574705 1949 ntBASIC20.88■□□□□ 0.93
CCR9P51686 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
CCR9P51686 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CCR9P51686 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CCR9P51686 CR559946.2-201ENST00000623684 991 ntBASIC20.88■□□□□ 0.93
CCR9P51686 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
CCR9P51686 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
CCR9P51686 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
CCR9P51686 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
CCR9P51686 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
CCR9P51686 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CCR9P51686 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
CCR9P51686 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC20.87■□□□□ 0.93
CCR9P51686 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CCR9P51686 SLC6A10P-202ENST00000431994 2058 ntBASIC20.87■□□□□ 0.93
CCR9P51686 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
CCR9P51686 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC20.86■□□□□ 0.93
CCR9P51686 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC20.86■□□□□ 0.93
CCR9P51686 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
CCR9P51686 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
CCR9P51686 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
CCR9P51686 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CCR9P51686 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CCR9P51686 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CCR9P51686 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CCR9P51686 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
CCR9P51686 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CCR9P51686 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
CCR9P51686 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC20.85■□□□□ 0.93
CCR9P51686 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CCR9P51686 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC20.85■□□□□ 0.93
CCR9P51686 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
CCR9P51686 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
CCR9P51686 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
CCR9P51686 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CCR9P51686 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC20.84■□□□□ 0.93
CCR9P51686 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
CCR9P51686 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 25 ms