Protein–RNA interactions for Protein: P31025

LCN1, Lipocalin-1, humanhuman

Predictions only

Length 176 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCN1P31025 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
LCN1P31025 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC22.03■■□□□ 1.12
LCN1P31025 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC22.03■■□□□ 1.12
LCN1P31025 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
LCN1P31025 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC22.03■■□□□ 1.12
LCN1P31025 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
LCN1P31025 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
LCN1P31025 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC22.02■■□□□ 1.12
LCN1P31025 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
LCN1P31025 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC22.02■■□□□ 1.12
LCN1P31025 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.11
LCN1P31025 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.11
LCN1P31025 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
LCN1P31025 AC097639.1-201ENST00000565519 1891 ntBASIC22.01■■□□□ 1.11
LCN1P31025 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC22.01■■□□□ 1.11
LCN1P31025 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC22.01■■□□□ 1.11
LCN1P31025 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC22.01■■□□□ 1.11
LCN1P31025 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC22.01■■□□□ 1.11
LCN1P31025 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC22■■□□□ 1.11
LCN1P31025 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC22■■□□□ 1.11
LCN1P31025 AL592293.1-201ENST00000502889 1188 ntBASIC22■■□□□ 1.11
LCN1P31025 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC22■■□□□ 1.11
LCN1P31025 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
LCN1P31025 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
LCN1P31025 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
LCN1P31025 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC21.99■■□□□ 1.11
LCN1P31025 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC21.99■■□□□ 1.11
LCN1P31025 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC21.99■■□□□ 1.11
LCN1P31025 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC21.99■■□□□ 1.11
LCN1P31025 U85056.1-201ENST00000616429 682 ntBASIC21.99■■□□□ 1.11
LCN1P31025 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
LCN1P31025 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC21.98■■□□□ 1.11
LCN1P31025 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
LCN1P31025 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC21.98■■□□□ 1.11
LCN1P31025 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
LCN1P31025 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC21.98■■□□□ 1.11
LCN1P31025 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
LCN1P31025 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC21.98■■□□□ 1.11
LCN1P31025 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
LCN1P31025 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
LCN1P31025 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
LCN1P31025 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC21.98■■□□□ 1.11
LCN1P31025 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC21.97■■□□□ 1.11
LCN1P31025 AC018755.3-202ENST00000596210 929 ntBASIC21.97■■□□□ 1.11
LCN1P31025 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
LCN1P31025 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
LCN1P31025 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
LCN1P31025 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC21.96■■□□□ 1.11
LCN1P31025 NTF6A-201ENST00000591175 560 ntBASIC21.96■■□□□ 1.11
LCN1P31025 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC21.96■■□□□ 1.11
LCN1P31025 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
LCN1P31025 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
LCN1P31025 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC21.95■■□□□ 1.1
LCN1P31025 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
LCN1P31025 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
LCN1P31025 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC21.95■■□□□ 1.1
LCN1P31025 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC21.95■■□□□ 1.1
LCN1P31025 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
LCN1P31025 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
LCN1P31025 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
LCN1P31025 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC21.95■■□□□ 1.1
LCN1P31025 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC21.94■■□□□ 1.1
LCN1P31025 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
LCN1P31025 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC21.94■■□□□ 1.1
LCN1P31025 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC21.94■■□□□ 1.1
LCN1P31025 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC21.94■■□□□ 1.1
LCN1P31025 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
LCN1P31025 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC21.94■■□□□ 1.1
LCN1P31025 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
LCN1P31025 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
LCN1P31025 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC21.94■■□□□ 1.1
LCN1P31025 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
LCN1P31025 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC21.94■■□□□ 1.1
LCN1P31025 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC21.94■■□□□ 1.1
LCN1P31025 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
LCN1P31025 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
LCN1P31025 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
LCN1P31025 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
LCN1P31025 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
LCN1P31025 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC21.93■■□□□ 1.1
LCN1P31025 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
LCN1P31025 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC21.92■■□□□ 1.1
LCN1P31025 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC21.92■■□□□ 1.1
LCN1P31025 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
LCN1P31025 IDNK-203ENST00000405990 629 ntTSL 2 BASIC21.92■■□□□ 1.1
LCN1P31025 MIR6765-201ENST00000614092 87 ntBASIC21.92■■□□□ 1.1
LCN1P31025 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
LCN1P31025 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC21.91■■□□□ 1.1
LCN1P31025 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC21.91■■□□□ 1.1
LCN1P31025 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
LCN1P31025 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC21.91■■□□□ 1.1
LCN1P31025 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
LCN1P31025 KRT18P60-201ENST00000312876 1297 ntBASIC21.91■■□□□ 1.1
LCN1P31025 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC21.91■■□□□ 1.1
LCN1P31025 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC21.91■■□□□ 1.1
LCN1P31025 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
LCN1P31025 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
LCN1P31025 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
LCN1P31025 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
LCN1P31025 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
Retrieved 100 of 98,524 protein–RNA pairs in 47.3 ms