Protein–RNA interactions for Protein: P06753

TPM3, Tropomyosin alpha-3 chain, humanhuman

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3P06753 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC26.62■■□□□ 1.85
TPM3P06753 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC26.62■■□□□ 1.85
TPM3P06753 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC26.62■■□□□ 1.85
TPM3P06753 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
TPM3P06753 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
TPM3P06753 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC26.61■■□□□ 1.85
TPM3P06753 AL162393.1-201ENST00000437852 946 ntBASIC26.61■■□□□ 1.85
TPM3P06753 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC26.61■■□□□ 1.85
TPM3P06753 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
TPM3P06753 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
TPM3P06753 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC26.6■■□□□ 1.85
TPM3P06753 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC26.6■■□□□ 1.85
TPM3P06753 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC26.6■■□□□ 1.85
TPM3P06753 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
TPM3P06753 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC26.59■■□□□ 1.85
TPM3P06753 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC26.59■■□□□ 1.85
TPM3P06753 AC096887.2-201ENST00000623443 1957 ntBASIC26.58■■□□□ 1.85
TPM3P06753 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC26.58■■□□□ 1.85
TPM3P06753 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC26.58■■□□□ 1.85
TPM3P06753 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC26.58■■□□□ 1.85
TPM3P06753 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC26.58■■□□□ 1.85
TPM3P06753 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
TPM3P06753 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC26.58■■□□□ 1.85
TPM3P06753 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC26.58■■□□□ 1.84
TPM3P06753 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC26.57■■□□□ 1.84
TPM3P06753 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC26.57■■□□□ 1.84
TPM3P06753 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC26.57■■□□□ 1.84
TPM3P06753 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC26.57■■□□□ 1.84
TPM3P06753 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC26.57■■□□□ 1.84
TPM3P06753 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC26.57■■□□□ 1.84
TPM3P06753 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC26.57■■□□□ 1.84
TPM3P06753 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC26.56■■□□□ 1.84
TPM3P06753 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
TPM3P06753 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC26.56■■□□□ 1.84
TPM3P06753 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
TPM3P06753 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
TPM3P06753 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC26.56■■□□□ 1.84
TPM3P06753 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
TPM3P06753 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC26.56■■□□□ 1.84
TPM3P06753 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC26.55■■□□□ 1.84
TPM3P06753 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC26.55■■□□□ 1.84
TPM3P06753 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC26.55■■□□□ 1.84
TPM3P06753 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
TPM3P06753 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC26.55■■□□□ 1.84
TPM3P06753 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC26.55■■□□□ 1.84
TPM3P06753 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC26.55■■□□□ 1.84
TPM3P06753 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC26.55■■□□□ 1.84
TPM3P06753 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC26.55■■□□□ 1.84
TPM3P06753 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC26.54■■□□□ 1.84
TPM3P06753 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
TPM3P06753 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC26.54■■□□□ 1.84
TPM3P06753 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
TPM3P06753 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
TPM3P06753 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC26.53■■□□□ 1.84
TPM3P06753 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
TPM3P06753 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
TPM3P06753 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC26.53■■□□□ 1.84
TPM3P06753 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC26.53■■□□□ 1.84
TPM3P06753 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
TPM3P06753 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
TPM3P06753 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
TPM3P06753 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC26.53■■□□□ 1.84
TPM3P06753 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
TPM3P06753 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC26.52■■□□□ 1.84
TPM3P06753 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC26.52■■□□□ 1.84
TPM3P06753 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC26.52■■□□□ 1.84
TPM3P06753 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
TPM3P06753 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC26.52■■□□□ 1.84
TPM3P06753 CHML-204ENST00000638121 920 ntTSL 2 BASIC26.52■■□□□ 1.84
TPM3P06753 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.84
TPM3P06753 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC26.51■■□□□ 1.84
TPM3P06753 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC26.51■■□□□ 1.83
TPM3P06753 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC26.51■■□□□ 1.83
TPM3P06753 AC008813.1-201ENST00000536597 885 ntBASIC26.51■■□□□ 1.83
TPM3P06753 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC26.51■■□□□ 1.83
TPM3P06753 DUSP8P5-201ENST00000422884 1815 ntBASIC26.51■■□□□ 1.83
TPM3P06753 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC26.5■■□□□ 1.83
TPM3P06753 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC26.5■■□□□ 1.83
TPM3P06753 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
TPM3P06753 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
TPM3P06753 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC26.5■■□□□ 1.83
TPM3P06753 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
TPM3P06753 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
TPM3P06753 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
TPM3P06753 AC141586.4-201ENST00000624558 1573 ntBASIC26.48■■□□□ 1.83
TPM3P06753 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC26.48■■□□□ 1.83
TPM3P06753 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC26.47■■□□□ 1.83
TPM3P06753 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
TPM3P06753 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC26.47■■□□□ 1.83
TPM3P06753 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC26.47■■□□□ 1.83
TPM3P06753 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
TPM3P06753 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC26.46■■□□□ 1.83
TPM3P06753 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
TPM3P06753 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
TPM3P06753 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC26.46■■□□□ 1.83
TPM3P06753 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.83
TPM3P06753 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC26.45■■□□□ 1.83
TPM3P06753 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC26.45■■□□□ 1.83
TPM3P06753 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.83
TPM3P06753 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.83
Retrieved 100 of 98,524 protein–RNA pairs in 117.1 ms