Protein–RNA interactions for Protein: O75437

ZNF254, Zinc finger protein 254, humanhuman

Predictions only

Length 659 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF254O75437 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
ZNF254O75437 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
ZNF254O75437 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
ZNF254O75437 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
ZNF254O75437 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
ZNF254O75437 AC097639.1-201ENST00000565519 1891 ntBASIC21.03■□□□□ 0.96
ZNF254O75437 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC21.02■□□□□ 0.96
ZNF254O75437 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
ZNF254O75437 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.96
ZNF254O75437 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
ZNF254O75437 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC21.02■□□□□ 0.96
ZNF254O75437 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
ZNF254O75437 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
ZNF254O75437 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
ZNF254O75437 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC21.02■□□□□ 0.96
ZNF254O75437 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC21.02■□□□□ 0.96
ZNF254O75437 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
ZNF254O75437 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC21.02■□□□□ 0.95
ZNF254O75437 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC21.01■□□□□ 0.95
ZNF254O75437 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC21.01■□□□□ 0.95
ZNF254O75437 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
ZNF254O75437 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
ZNF254O75437 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
ZNF254O75437 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC21.01■□□□□ 0.95
ZNF254O75437 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
ZNF254O75437 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC21■□□□□ 0.95
ZNF254O75437 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
ZNF254O75437 PFN2-211ENST00000489155 636 ntTSL 4 BASIC21■□□□□ 0.95
ZNF254O75437 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC21■□□□□ 0.95
ZNF254O75437 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
ZNF254O75437 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC21■□□□□ 0.95
ZNF254O75437 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
ZNF254O75437 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC21■□□□□ 0.95
ZNF254O75437 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC21■□□□□ 0.95
ZNF254O75437 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
ZNF254O75437 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
ZNF254O75437 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC20.99■□□□□ 0.95
ZNF254O75437 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC20.99■□□□□ 0.95
ZNF254O75437 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC20.98■□□□□ 0.95
ZNF254O75437 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
ZNF254O75437 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC20.98■□□□□ 0.95
ZNF254O75437 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
ZNF254O75437 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
ZNF254O75437 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
ZNF254O75437 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC20.97■□□□□ 0.95
ZNF254O75437 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
ZNF254O75437 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC20.97■□□□□ 0.95
ZNF254O75437 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
ZNF254O75437 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
ZNF254O75437 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
ZNF254O75437 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC20.97■□□□□ 0.95
ZNF254O75437 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
ZNF254O75437 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
ZNF254O75437 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
ZNF254O75437 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
ZNF254O75437 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
ZNF254O75437 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
ZNF254O75437 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
ZNF254O75437 AC025884.2-201ENST00000553429 711 ntBASIC20.96■□□□□ 0.95
ZNF254O75437 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
ZNF254O75437 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
ZNF254O75437 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
ZNF254O75437 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
ZNF254O75437 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
ZNF254O75437 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
ZNF254O75437 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
ZNF254O75437 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
ZNF254O75437 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
ZNF254O75437 RARA-203ENST00000394086 2008 ntTSL 2 BASIC20.95■□□□□ 0.94
ZNF254O75437 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
ZNF254O75437 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC20.95■□□□□ 0.94
ZNF254O75437 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
ZNF254O75437 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
ZNF254O75437 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC20.95■□□□□ 0.94
ZNF254O75437 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC20.95■□□□□ 0.94
ZNF254O75437 MIR3960-201ENST00000583311 91 ntBASIC20.95■□□□□ 0.94
ZNF254O75437 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC20.95■□□□□ 0.94
ZNF254O75437 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
ZNF254O75437 AP003733.4-201ENST00000623785 1697 ntBASIC20.95■□□□□ 0.94
ZNF254O75437 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
ZNF254O75437 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC20.95■□□□□ 0.94
ZNF254O75437 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC20.94■□□□□ 0.94
ZNF254O75437 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
ZNF254O75437 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
ZNF254O75437 AL157400.5-201ENST00000507624 621 ntBASIC20.94■□□□□ 0.94
ZNF254O75437 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
ZNF254O75437 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
ZNF254O75437 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC20.93■□□□□ 0.94
ZNF254O75437 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
ZNF254O75437 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
ZNF254O75437 AC060814.1-201ENST00000554326 538 ntBASIC20.93■□□□□ 0.94
ZNF254O75437 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
ZNF254O75437 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
ZNF254O75437 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
ZNF254O75437 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC20.93■□□□□ 0.94
ZNF254O75437 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
ZNF254O75437 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
ZNF254O75437 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
ZNF254O75437 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
ZNF254O75437 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 18.9 ms