Protein–RNA interactions for Protein: O00453

LST1, Leukocyte-specific transcript 1 protein, humanhuman

Predictions only

Length 97 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LST1O00453 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
LST1O00453 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
LST1O00453 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
LST1O00453 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
LST1O00453 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
LST1O00453 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
LST1O00453 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
LST1O00453 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
LST1O00453 C9orf163-202ENST00000624034 2573 ntBASIC15.54■□□□□ 0.08
LST1O00453 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
LST1O00453 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
LST1O00453 GSTZ1-201ENST00000216465 1338 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
LST1O00453 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC15.54■□□□□ 0.08
LST1O00453 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC15.54■□□□□ 0.08
LST1O00453 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC15.54■□□□□ 0.08
LST1O00453 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC15.54■□□□□ 0.08
LST1O00453 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
LST1O00453 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
LST1O00453 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
LST1O00453 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
LST1O00453 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
LST1O00453 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
LST1O00453 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
LST1O00453 MEST-211ENST00000437945 1455 ntTSL 5 BASIC15.53■□□□□ 0.08
LST1O00453 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC15.53■□□□□ 0.08
LST1O00453 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
LST1O00453 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
LST1O00453 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
LST1O00453 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
LST1O00453 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
LST1O00453 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
LST1O00453 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
LST1O00453 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
LST1O00453 AC141586.4-201ENST00000624558 1573 ntBASIC15.53■□□□□ 0.08
LST1O00453 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
LST1O00453 DUSP15-202ENST00000339738 1454 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
LST1O00453 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
LST1O00453 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.08
LST1O00453 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC15.52■□□□□ 0.08
LST1O00453 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
LST1O00453 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC15.52■□□□□ 0.07
LST1O00453 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC15.52■□□□□ 0.07
LST1O00453 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.07
LST1O00453 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
LST1O00453 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
LST1O00453 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
LST1O00453 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
LST1O00453 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
LST1O00453 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
LST1O00453 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
LST1O00453 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
LST1O00453 LY6K-203ENST00000519387 963 ntAPPRIS ALT2 TSL 2 BASIC15.51■□□□□ 0.07
LST1O00453 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
LST1O00453 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
LST1O00453 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
LST1O00453 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
LST1O00453 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
LST1O00453 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC15.5■□□□□ 0.07
LST1O00453 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
LST1O00453 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
LST1O00453 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
LST1O00453 HMGB1-205ENST00000399494 1282 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
LST1O00453 EP400NL-214ENST00000641289 2402 ntBASIC15.5■□□□□ 0.07
LST1O00453 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
LST1O00453 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
LST1O00453 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
LST1O00453 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
LST1O00453 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC15.5■□□□□ 0.07
LST1O00453 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC15.5■□□□□ 0.07
LST1O00453 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
LST1O00453 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
LST1O00453 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
LST1O00453 PKD1P6-201ENST00000343738 4769 ntBASIC15.49■□□□□ 0.07
LST1O00453 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
LST1O00453 MED17-221ENST00000639724 2317 ntTSL 5 BASIC15.49■□□□□ 0.07
LST1O00453 STUB1-201ENST00000219548 1472 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
LST1O00453 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
LST1O00453 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC15.49■□□□□ 0.07
LST1O00453 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
LST1O00453 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
LST1O00453 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
LST1O00453 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
LST1O00453 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC15.48■□□□□ 0.07
LST1O00453 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
LST1O00453 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
LST1O00453 NFE2L3P1-201ENST00000588207 1959 ntBASIC15.48■□□□□ 0.07
LST1O00453 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
LST1O00453 C1orf229-201ENST00000623686 2258 ntBASIC15.48■□□□□ 0.07
LST1O00453 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC15.48■□□□□ 0.07
LST1O00453 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
LST1O00453 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
LST1O00453 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC15.47■□□□□ 0.07
LST1O00453 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
LST1O00453 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC15.47■□□□□ 0.07
LST1O00453 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
LST1O00453 GALC-202ENST00000393568 2054 ntTSL 2 BASIC15.47■□□□□ 0.07
LST1O00453 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC15.47■□□□□ 0.07
LST1O00453 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
LST1O00453 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC15.47■□□□□ 0.07
LST1O00453 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC15.46■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 46.5 ms