Protein–RNA interactions for Protein: O00151

PDLIM1, PDZ and LIM domain protein 1, humanhuman

Predictions only

Length 329 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1O00151 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC22.58■■□□□ 1.2
PDLIM1O00151 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.2
PDLIM1O00151 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC22.58■■□□□ 1.2
PDLIM1O00151 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
PDLIM1O00151 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
PDLIM1O00151 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
PDLIM1O00151 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
PDLIM1O00151 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
PDLIM1O00151 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC22.57■■□□□ 1.2
PDLIM1O00151 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
PDLIM1O00151 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
PDLIM1O00151 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
PDLIM1O00151 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC22.56■■□□□ 1.2
PDLIM1O00151 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC22.56■■□□□ 1.2
PDLIM1O00151 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC22.56■■□□□ 1.2
PDLIM1O00151 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
PDLIM1O00151 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC22.55■■□□□ 1.2
PDLIM1O00151 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
PDLIM1O00151 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC22.55■■□□□ 1.2
PDLIM1O00151 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC22.55■■□□□ 1.2
PDLIM1O00151 GDI1-215ENST00000630693 786 ntTSL 4 BASIC22.55■■□□□ 1.2
PDLIM1O00151 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC22.55■■□□□ 1.2
PDLIM1O00151 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
PDLIM1O00151 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC22.55■■□□□ 1.2
PDLIM1O00151 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
PDLIM1O00151 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
PDLIM1O00151 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC22.54■■□□□ 1.2
PDLIM1O00151 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
PDLIM1O00151 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC22.54■■□□□ 1.2
PDLIM1O00151 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC22.54■■□□□ 1.2
PDLIM1O00151 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC22.54■■□□□ 1.2
PDLIM1O00151 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC22.54■■□□□ 1.2
PDLIM1O00151 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
PDLIM1O00151 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC22.53■■□□□ 1.2
PDLIM1O00151 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC22.53■■□□□ 1.2
PDLIM1O00151 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
PDLIM1O00151 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
PDLIM1O00151 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
PDLIM1O00151 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC22.52■■□□□ 1.2
PDLIM1O00151 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
PDLIM1O00151 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
PDLIM1O00151 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
PDLIM1O00151 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
PDLIM1O00151 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC22.51■■□□□ 1.19
PDLIM1O00151 AC016575.1-201ENST00000607026 382 ntBASIC22.51■■□□□ 1.19
PDLIM1O00151 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC22.51■■□□□ 1.19
PDLIM1O00151 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
PDLIM1O00151 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
PDLIM1O00151 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
PDLIM1O00151 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
PDLIM1O00151 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
PDLIM1O00151 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC22.5■■□□□ 1.19
PDLIM1O00151 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC22.5■■□□□ 1.19
PDLIM1O00151 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC22.5■■□□□ 1.19
PDLIM1O00151 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC22.5■■□□□ 1.19
PDLIM1O00151 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC22.49■■□□□ 1.19
PDLIM1O00151 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC22.49■■□□□ 1.19
PDLIM1O00151 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC22.49■■□□□ 1.19
PDLIM1O00151 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC22.49■■□□□ 1.19
PDLIM1O00151 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC22.49■■□□□ 1.19
PDLIM1O00151 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC22.49■■□□□ 1.19
PDLIM1O00151 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC22.49■■□□□ 1.19
PDLIM1O00151 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
PDLIM1O00151 AC096887.2-201ENST00000623443 1957 ntBASIC22.49■■□□□ 1.19
PDLIM1O00151 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
PDLIM1O00151 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
PDLIM1O00151 HES6-205ENST00000409356 528 ntTSL 2 BASIC22.48■■□□□ 1.19
PDLIM1O00151 RPS2-202ENST00000526522 924 ntTSL 2 BASIC22.48■■□□□ 1.19
PDLIM1O00151 PEX7-203ENST00000541292 945 ntTSL 5 BASIC22.48■■□□□ 1.19
PDLIM1O00151 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC22.48■■□□□ 1.19
PDLIM1O00151 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC22.48■■□□□ 1.19
PDLIM1O00151 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC22.47■■□□□ 1.19
PDLIM1O00151 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
PDLIM1O00151 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
PDLIM1O00151 MIR639-201ENST00000384974 98 ntBASIC22.47■■□□□ 1.19
PDLIM1O00151 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC22.47■■□□□ 1.19
PDLIM1O00151 LINC01124-201ENST00000409786 2117 ntBASIC22.47■■□□□ 1.19
PDLIM1O00151 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
PDLIM1O00151 MBP-237ENST00000579129 1052 ntTSL 5 BASIC22.47■■□□□ 1.19
PDLIM1O00151 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
PDLIM1O00151 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC22.47■■□□□ 1.19
PDLIM1O00151 AC110285.7-201ENST00000624417 1536 ntBASIC22.47■■□□□ 1.19
PDLIM1O00151 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC22.46■■□□□ 1.19
PDLIM1O00151 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
PDLIM1O00151 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
PDLIM1O00151 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
PDLIM1O00151 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC22.45■■□□□ 1.19
PDLIM1O00151 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC22.45■■□□□ 1.19
PDLIM1O00151 HLA-V-202ENST00000446817 847 ntBASIC22.45■■□□□ 1.18
PDLIM1O00151 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC22.45■■□□□ 1.18
PDLIM1O00151 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
PDLIM1O00151 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC22.45■■□□□ 1.18
PDLIM1O00151 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
PDLIM1O00151 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
PDLIM1O00151 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC22.44■■□□□ 1.18
PDLIM1O00151 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC22.44■■□□□ 1.18
PDLIM1O00151 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC22.44■■□□□ 1.18
PDLIM1O00151 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC22.44■■□□□ 1.18
PDLIM1O00151 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
PDLIM1O00151 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Retrieved 100 of 98,524 protein–RNA pairs in 68.5 ms