Protein–RNA interactions for Protein: A0A0C4DH27

TRGV8, T-cell receptor gamma variable 8 (Fragment), humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV8A0A0C4DH27 AC021242.3-201ENST00000607598 1377 ntBASIC21.43■■□□□ 1.02
TRGV8A0A0C4DH27 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
TRGV8A0A0C4DH27 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC21.43■■□□□ 1.02
TRGV8A0A0C4DH27 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC21.42■■□□□ 1.02
TRGV8A0A0C4DH27 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
TRGV8A0A0C4DH27 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC21.42■■□□□ 1.02
TRGV8A0A0C4DH27 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC21.42■■□□□ 1.02
TRGV8A0A0C4DH27 SHF-206ENST00000560471 2499 ntTSL 5 BASIC21.41■■□□□ 1.02
TRGV8A0A0C4DH27 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
TRGV8A0A0C4DH27 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC21.41■■□□□ 1.02
TRGV8A0A0C4DH27 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC21.41■■□□□ 1.02
TRGV8A0A0C4DH27 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
TRGV8A0A0C4DH27 TRIR-202ENST00000588213 841 ntTSL 3 BASIC21.41■■□□□ 1.02
TRGV8A0A0C4DH27 DRD5P2-201ENST00000421395 2012 ntBASIC21.41■■□□□ 1.02
TRGV8A0A0C4DH27 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
TRGV8A0A0C4DH27 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC21.4■■□□□ 1.02
TRGV8A0A0C4DH27 RALB-208ENST00000631312 311 ntTSL 5 BASIC21.4■■□□□ 1.02
TRGV8A0A0C4DH27 BX255925.1-201ENST00000566954 1854 ntBASIC21.4■■□□□ 1.02
TRGV8A0A0C4DH27 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
TRGV8A0A0C4DH27 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC21.4■■□□□ 1.02
TRGV8A0A0C4DH27 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC21.4■■□□□ 1.02
TRGV8A0A0C4DH27 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC21.39■■□□□ 1.02
TRGV8A0A0C4DH27 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
TRGV8A0A0C4DH27 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC21.39■■□□□ 1.01
TRGV8A0A0C4DH27 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
TRGV8A0A0C4DH27 AC092028.1-203ENST00000608262 953 ntBASIC21.39■■□□□ 1.01
TRGV8A0A0C4DH27 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC21.39■■□□□ 1.01
TRGV8A0A0C4DH27 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
TRGV8A0A0C4DH27 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
TRGV8A0A0C4DH27 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC21.39■■□□□ 1.01
TRGV8A0A0C4DH27 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC21.39■■□□□ 1.01
TRGV8A0A0C4DH27 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
TRGV8A0A0C4DH27 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
TRGV8A0A0C4DH27 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
TRGV8A0A0C4DH27 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC21.38■■□□□ 1.01
TRGV8A0A0C4DH27 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC21.38■■□□□ 1.01
TRGV8A0A0C4DH27 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
TRGV8A0A0C4DH27 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC21.38■■□□□ 1.01
TRGV8A0A0C4DH27 SRR-208ENST00000576848 588 ntTSL 4 BASIC21.38■■□□□ 1.01
TRGV8A0A0C4DH27 LINC01003-201ENST00000564834 1764 ntBASIC21.38■■□□□ 1.01
TRGV8A0A0C4DH27 AC139426.1-201ENST00000568218 2529 ntBASIC21.37■■□□□ 1.01
TRGV8A0A0C4DH27 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC21.37■■□□□ 1.01
TRGV8A0A0C4DH27 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
TRGV8A0A0C4DH27 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC21.37■■□□□ 1.01
TRGV8A0A0C4DH27 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC21.37■■□□□ 1.01
TRGV8A0A0C4DH27 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
TRGV8A0A0C4DH27 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC21.37■■□□□ 1.01
TRGV8A0A0C4DH27 FEV-201ENST00000295727 1879 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
TRGV8A0A0C4DH27 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC21.36■■□□□ 1.01
TRGV8A0A0C4DH27 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC21.36■■□□□ 1.01
TRGV8A0A0C4DH27 MFSD12-201ENST00000355415 2124 ntAPPRIS P3 TSL 1 (best) BASIC21.36■■□□□ 1.01
TRGV8A0A0C4DH27 MIR638-201ENST00000385237 100 ntBASIC21.36■■□□□ 1.01
TRGV8A0A0C4DH27 NALT1-201ENST00000429224 738 ntTSL 5 BASIC21.36■■□□□ 1.01
TRGV8A0A0C4DH27 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC21.36■■□□□ 1.01
TRGV8A0A0C4DH27 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
TRGV8A0A0C4DH27 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
TRGV8A0A0C4DH27 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC21.36■■□□□ 1.01
TRGV8A0A0C4DH27 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC21.36■■□□□ 1.01
TRGV8A0A0C4DH27 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
TRGV8A0A0C4DH27 FZD2-201ENST00000315323 2112 ntAPPRIS P1 BASIC21.35■■□□□ 1.01
TRGV8A0A0C4DH27 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC21.35■■□□□ 1.01
TRGV8A0A0C4DH27 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC21.35■■□□□ 1.01
TRGV8A0A0C4DH27 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
TRGV8A0A0C4DH27 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
TRGV8A0A0C4DH27 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC21.35■■□□□ 1.01
TRGV8A0A0C4DH27 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
TRGV8A0A0C4DH27 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC21.35■■□□□ 1.01
TRGV8A0A0C4DH27 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC21.35■■□□□ 1.01
TRGV8A0A0C4DH27 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC21.35■■□□□ 1.01
TRGV8A0A0C4DH27 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC21.34■■□□□ 1.01
TRGV8A0A0C4DH27 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC21.34■■□□□ 1.01
TRGV8A0A0C4DH27 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
TRGV8A0A0C4DH27 RPP21-222ENST00000433076 577 ntTSL 2 BASIC21.34■■□□□ 1.01
TRGV8A0A0C4DH27 AL139246.5-201ENST00000606645 996 ntBASIC21.34■■□□□ 1.01
TRGV8A0A0C4DH27 RCC1L-201ENST00000610322 2300 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
TRGV8A0A0C4DH27 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
TRGV8A0A0C4DH27 VEGFC-202ENST00000618562 2064 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
TRGV8A0A0C4DH27 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
TRGV8A0A0C4DH27 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
TRGV8A0A0C4DH27 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC21.33■■□□□ 1.01
TRGV8A0A0C4DH27 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC21.33■■□□□ 1.01
TRGV8A0A0C4DH27 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC21.33■■□□□ 1.01
TRGV8A0A0C4DH27 MIR4281-201ENST00000580852 62 ntBASIC21.33■■□□□ 1.01
TRGV8A0A0C4DH27 AC142472.1-201ENST00000612013 1741 ntBASIC21.32■■□□□ 1
TRGV8A0A0C4DH27 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
TRGV8A0A0C4DH27 AL136116.3-201ENST00000402907 1138 ntBASIC21.32■■□□□ 1
TRGV8A0A0C4DH27 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC21.32■■□□□ 1
TRGV8A0A0C4DH27 AC131281.2-201ENST00000520478 145 ntBASIC21.32■■□□□ 1
TRGV8A0A0C4DH27 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC21.32■■□□□ 1
TRGV8A0A0C4DH27 AC010997.5-201ENST00000609182 354 ntBASIC21.32■■□□□ 1
TRGV8A0A0C4DH27 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC21.32■■□□□ 1
TRGV8A0A0C4DH27 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC21.32■■□□□ 1
TRGV8A0A0C4DH27 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC21.32■■□□□ 1
TRGV8A0A0C4DH27 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC21.31■■□□□ 1
TRGV8A0A0C4DH27 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
TRGV8A0A0C4DH27 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC21.31■■□□□ 1
TRGV8A0A0C4DH27 C17orf97-201ENST00000360127 1839 ntAPPRIS P2 TSL 1 (best) BASIC21.31■■□□□ 1
TRGV8A0A0C4DH27 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
TRGV8A0A0C4DH27 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC21.3■■□□□ 1
TRGV8A0A0C4DH27 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC21.3■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 49.4 ms