Protein–RNA interactions for Protein: A0A087WVF3

TBC1D3D, TBC1 domain family member 3D, humanhuman

Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D3DA0A087WVF3 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC23.91■■□□□ 1.42
TBC1D3DA0A087WVF3 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC23.91■■□□□ 1.42
TBC1D3DA0A087WVF3 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC23.91■■□□□ 1.42
TBC1D3DA0A087WVF3 GGA1-204ENST00000381756 2107 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
TBC1D3DA0A087WVF3 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC23.9■■□□□ 1.42
TBC1D3DA0A087WVF3 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC23.9■■□□□ 1.42
TBC1D3DA0A087WVF3 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC23.9■■□□□ 1.42
TBC1D3DA0A087WVF3 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC23.9■■□□□ 1.42
TBC1D3DA0A087WVF3 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC23.9■■□□□ 1.42
TBC1D3DA0A087WVF3 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
TBC1D3DA0A087WVF3 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC23.9■■□□□ 1.42
TBC1D3DA0A087WVF3 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
TBC1D3DA0A087WVF3 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC23.89■■□□□ 1.42
TBC1D3DA0A087WVF3 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC23.89■■□□□ 1.41
TBC1D3DA0A087WVF3 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC23.89■■□□□ 1.41
TBC1D3DA0A087WVF3 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC23.89■■□□□ 1.41
TBC1D3DA0A087WVF3 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC23.88■■□□□ 1.41
TBC1D3DA0A087WVF3 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC23.88■■□□□ 1.41
TBC1D3DA0A087WVF3 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
TBC1D3DA0A087WVF3 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC23.88■■□□□ 1.41
TBC1D3DA0A087WVF3 KRT18P24-201ENST00000344739 1156 ntBASIC23.88■■□□□ 1.41
TBC1D3DA0A087WVF3 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC23.88■■□□□ 1.41
TBC1D3DA0A087WVF3 Z92544.1-202ENST00000571933 1220 ntBASIC23.88■■□□□ 1.41
TBC1D3DA0A087WVF3 THA1P-201ENST00000590384 1145 ntBASIC23.88■■□□□ 1.41
TBC1D3DA0A087WVF3 RAB40C-201ENST00000248139 2699 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
TBC1D3DA0A087WVF3 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
TBC1D3DA0A087WVF3 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
TBC1D3DA0A087WVF3 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
TBC1D3DA0A087WVF3 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC23.88■■□□□ 1.41
TBC1D3DA0A087WVF3 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC23.88■■□□□ 1.41
TBC1D3DA0A087WVF3 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
TBC1D3DA0A087WVF3 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC23.87■■□□□ 1.41
TBC1D3DA0A087WVF3 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC23.87■■□□□ 1.41
TBC1D3DA0A087WVF3 AC131212.1-201ENST00000613771 668 ntBASIC23.87■■□□□ 1.41
TBC1D3DA0A087WVF3 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC23.87■■□□□ 1.41
TBC1D3DA0A087WVF3 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
TBC1D3DA0A087WVF3 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC23.86■■□□□ 1.41
TBC1D3DA0A087WVF3 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC23.86■■□□□ 1.41
TBC1D3DA0A087WVF3 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
TBC1D3DA0A087WVF3 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC23.86■■□□□ 1.41
TBC1D3DA0A087WVF3 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC23.85■■□□□ 1.41
TBC1D3DA0A087WVF3 SNAI3-AS1-204ENST00000567997 2048 ntBASIC23.85■■□□□ 1.41
TBC1D3DA0A087WVF3 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC23.85■■□□□ 1.41
TBC1D3DA0A087WVF3 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC23.85■■□□□ 1.41
TBC1D3DA0A087WVF3 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC23.85■■□□□ 1.41
TBC1D3DA0A087WVF3 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
TBC1D3DA0A087WVF3 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
TBC1D3DA0A087WVF3 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC23.84■■□□□ 1.41
TBC1D3DA0A087WVF3 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
TBC1D3DA0A087WVF3 BX664725.1-201ENST00000438252 379 ntBASIC23.84■■□□□ 1.41
TBC1D3DA0A087WVF3 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC23.84■■□□□ 1.41
TBC1D3DA0A087WVF3 KRT125P-201ENST00000546827 989 ntBASIC23.84■■□□□ 1.41
TBC1D3DA0A087WVF3 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC23.84■■□□□ 1.41
TBC1D3DA0A087WVF3 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC23.84■■□□□ 1.41
TBC1D3DA0A087WVF3 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
TBC1D3DA0A087WVF3 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC23.83■■□□□ 1.41
TBC1D3DA0A087WVF3 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC23.83■■□□□ 1.41
TBC1D3DA0A087WVF3 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC23.83■■□□□ 1.41
TBC1D3DA0A087WVF3 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC23.83■■□□□ 1.4
TBC1D3DA0A087WVF3 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
TBC1D3DA0A087WVF3 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC23.82■■□□□ 1.4
TBC1D3DA0A087WVF3 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
TBC1D3DA0A087WVF3 AC120024.1-201ENST00000562672 995 ntBASIC23.82■■□□□ 1.4
TBC1D3DA0A087WVF3 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC23.82■■□□□ 1.4
TBC1D3DA0A087WVF3 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
TBC1D3DA0A087WVF3 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
TBC1D3DA0A087WVF3 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC23.82■■□□□ 1.4
TBC1D3DA0A087WVF3 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC23.81■■□□□ 1.4
TBC1D3DA0A087WVF3 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
TBC1D3DA0A087WVF3 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
TBC1D3DA0A087WVF3 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
TBC1D3DA0A087WVF3 AL592295.1-201ENST00000400984 884 ntBASIC23.81■■□□□ 1.4
TBC1D3DA0A087WVF3 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC23.8■■□□□ 1.4
TBC1D3DA0A087WVF3 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC23.8■■□□□ 1.4
TBC1D3DA0A087WVF3 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
TBC1D3DA0A087WVF3 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC23.8■■□□□ 1.4
TBC1D3DA0A087WVF3 AL356441.2-201ENST00000443009 864 ntBASIC23.8■■□□□ 1.4
TBC1D3DA0A087WVF3 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC23.8■■□□□ 1.4
TBC1D3DA0A087WVF3 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC23.8■■□□□ 1.4
TBC1D3DA0A087WVF3 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC23.79■■□□□ 1.4
TBC1D3DA0A087WVF3 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC23.79■■□□□ 1.4
TBC1D3DA0A087WVF3 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC23.79■■□□□ 1.4
TBC1D3DA0A087WVF3 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC23.79■■□□□ 1.4
TBC1D3DA0A087WVF3 MIR4787-201ENST00000607364 84 ntBASIC23.79■■□□□ 1.4
TBC1D3DA0A087WVF3 GABRA5-203ENST00000400081 2761 ntAPPRIS P1 TSL 5 BASIC23.79■■□□□ 1.4
TBC1D3DA0A087WVF3 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC23.78■■□□□ 1.4
TBC1D3DA0A087WVF3 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC23.78■■□□□ 1.4
TBC1D3DA0A087WVF3 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC23.78■■□□□ 1.4
TBC1D3DA0A087WVF3 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
TBC1D3DA0A087WVF3 IHH-201ENST00000295731 2023 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
TBC1D3DA0A087WVF3 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC23.77■■□□□ 1.4
TBC1D3DA0A087WVF3 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
TBC1D3DA0A087WVF3 CREM-229ENST00000474362 1030 ntTSL 2 BASIC23.77■■□□□ 1.4
TBC1D3DA0A087WVF3 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
TBC1D3DA0A087WVF3 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC23.76■■□□□ 1.39
TBC1D3DA0A087WVF3 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
TBC1D3DA0A087WVF3 TNIP2-201ENST00000315423 1974 ntAPPRIS P3 TSL 1 (best) BASIC23.76■■□□□ 1.39
TBC1D3DA0A087WVF3 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC23.76■■□□□ 1.39
TBC1D3DA0A087WVF3 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
TBC1D3DA0A087WVF3 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC23.76■■□□□ 1.39
Retrieved 100 of 98,524 protein–RNA pairs in 79.1 ms