Protein–RNA interactions for Protein: P43243

MATR3, Matrin-3, humanhuman

Known RBP eCLIP

Length 847 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MATR3P43243 ZNF700-201ENST00000254321 2882 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.523e-7■□□□□ 8.7
MATR3P43243 DDI2-202ENST00000480945 10625 ntAPPRIS P1 TSL 2 BASIC11.16□□□□□ -0.625e-6■□□□□ 8.7
MATR3P43243 DDI2-203ENST00000483899 497 ntTSL 39.82□□□□□ -0.845e-6■□□□□ 8.7
MATR3P43243 AC008770.3-203ENST00000591441 677 ntTSL 39.52□□□□□ -0.893e-7■□□□□ 8.7
MATR3P43243 AP3B1-207ENST00000522901 1170 ntTSL 39.31□□□□□ -0.923e-7■□□□□ 8.7
MATR3P43243 AP3B1-208ENST00000523204 776 ntTSL 59.21□□□□□ -0.943e-7■□□□□ 8.7
MATR3P43243 KIAA0319L-204ENST00000431916 912 ntTSL 37.52□□□□□ -1.213e-7■□□□□ 8.7
MATR3P43243 AC008770.4-201ENST00000586394 468 ntTSL 3 BASIC7□□□□□ -1.293e-7■□□□□ 8.7
MATR3P43243 MIR606-201ENST00000384851 96 ntBASIC1.03□□□□□ -2.242e-17■□□□□ 8.7
MATR3P43243 ABCC2-202ENST00000370449 5312 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.651e-6■□□□□ 8.6
MATR3P43243 HIPK2-203ENST00000428878 3969 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.425e-6■□□□□ 8.6
MATR3P43243 HIPK2-202ENST00000406875 15049 ntAPPRIS P4 TSL 1 (best) BASIC7.43□□□□□ -1.225e-6■□□□□ 8.6
MATR3P43243 HAL-206ENST00000546999 2271 ntTSL 1 (best)16.59■□□□□ 0.254e-9■□□□□ 8.6
MATR3P43243 HAL-202ENST00000538703 2637 ntTSL 2 BASIC15.31■□□□□ 0.044e-9■□□□□ 8.6
MATR3P43243 PROX1-207ENST00000607726 562 ntTSL 415.17■□□□□ 0.027e-41■□□□□ 8.6
MATR3P43243 HAL-204ENST00000544080 2804 ntTSL 214.76□□□□□ -0.054e-9■□□□□ 8.6
MATR3P43243 PANK3-201ENST00000239231 10506 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.073e-7■□□□□ 8.6
MATR3P43243 HAL-201ENST00000261208 3913 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.564e-9■□□□□ 8.6
MATR3P43243 HAL-211ENST00000552509 1026 ntTSL 311.03□□□□□ -0.644e-9■□□□□ 8.6
MATR3P43243 HAL-203ENST00000541929 3846 ntTSL 2 BASIC11□□□□□ -0.654e-9■□□□□ 8.6
MATR3P43243 HAL-209ENST00000549376 352 ntTSL 39.68□□□□□ -0.864e-9■□□□□ 8.6
MATR3P43243 HAL-205ENST00000546579 697 ntTSL 47.59□□□□□ -1.194e-9■□□□□ 8.6
MATR3P43243 PPFIBP2-221ENST00000532381 769 ntTSL 47.07□□□□□ -1.284e-9■□□□□ 8.6
MATR3P43243 SLC2A3P1-201ENST00000519666 1451 ntBASIC4.83□□□□□ -1.643e-7■□□□□ 8.6
MATR3P43243 ITIH3-204ENST00000464804 543 ntTSL 418.25■□□□□ 0.513e-18■□□□□ 8.6
MATR3P43243 ITIH3-201ENST00000416872 2220 ntTSL 2 BASIC12.54□□□□□ -0.43e-18■□□□□ 8.6
MATR3P43243 ITIH3-202ENST00000449956 3007 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.883e-18■□□□□ 8.6
MATR3P43243 ITIH3-211ENST00000621946 3038 ntTSL 1 (best) BASIC9.29□□□□□ -0.923e-18■□□□□ 8.6
MATR3P43243 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC21.42■■□□□ 1.021e-7■□□□□ 8.5
MATR3P43243 PGAP1-208ENST00000470179 2874 ntTSL 218.84■□□□□ 0.611e-7■□□□□ 8.5
MATR3P43243 TAB2-202ENST00000461481 524 ntTSL 315.15■□□□□ 0.021e-7■□□□□ 8.5
MATR3P43243 PGAP1-201ENST00000354764 11114 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.061e-7■□□□□ 8.5
MATR3P43243 PGAP1-206ENST00000423035 8942 ntTSL 1 (best)5.29□□□□□ -1.561e-7■□□□□ 8.5
MATR3P43243 DPYSL2-205ENST00000521983 591 ntTSL 415.25■□□□□ 0.032e-10■□□□□ 8.5
MATR3P43243 SLC13A3-203ENST00000372121 848 ntTSL 517.66■□□□□ 0.424e-6■□□□□ 8.5
MATR3P43243 SLC20A2-214ENST00000524237 545 ntTSL 417.43■□□□□ 0.385e-13■□□□□ 8.5
MATR3P43243 SLC20A2-213ENST00000524211 968 ntTSL 512.21□□□□□ -0.455e-13■□□□□ 8.5
MATR3P43243 SLC20A2-205ENST00000518717 573 ntTSL 49.55□□□□□ -0.885e-13■□□□□ 8.5
MATR3P43243 SLC20A2-203ENST00000518384 557 ntTSL 48.48□□□□□ -1.055e-13■□□□□ 8.5
MATR3P43243 EIF4EBP2-201ENST00000373218 7257 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.441e-11■□□□□ 8.5
MATR3P43243 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.036e-7■□□□□ 8.4
MATR3P43243 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.936e-9■□□□□ 8.4
MATR3P43243 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.926e-7■□□□□ 8.4
MATR3P43243 CASC3-201ENST00000264645 4116 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.376e-7■□□□□ 8.4
MATR3P43243 PLEKHA7-214ENST00000532079 565 ntTSL 5 BASIC16.88■□□□□ 0.296e-7■□□□□ 8.4
MATR3P43243 RABEPK-206ENST00000628863 1537 ntTSL 5 BASIC16.15■□□□□ 0.186e-7■□□□□ 8.4
MATR3P43243 PLEKHA7-202ENST00000355661 4980 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.096e-7■□□□□ 8.4
MATR3P43243 RABEPK-201ENST00000259460 1313 ntTSL 1 (best) BASIC15.47■□□□□ 0.076e-7■□□□□ 8.4
MATR3P43243 RABEPK-205ENST00000416065 733 ntTSL 314.07□□□□□ -0.166e-7■□□□□ 8.4
MATR3P43243 KIZ-212ENST00000620553 558 ntTSL 313.93□□□□□ -0.186e-7■□□□□ 8.4
MATR3P43243 RABEPK-203ENST00000373544 2450 ntTSL 1 (best) BASIC13.15□□□□□ -0.36e-7■□□□□ 8.4
MATR3P43243 PLEKHA7-211ENST00000531066 4561 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.316e-7■□□□□ 8.4
MATR3P43243 PLEKHA7-209ENST00000529213 561 ntTSL 412.68□□□□□ -0.386e-7■□□□□ 8.4
MATR3P43243 EIF3H-203ENST00000518034 1047 ntTSL 211.7□□□□□ -0.546e-7■□□□□ 8.4
MATR3P43243 EIF3H-204ENST00000518949 843 ntTSL 310.61□□□□□ -0.716e-7■□□□□ 8.4
MATR3P43243 EIF3H-205ENST00000518995 731 ntTSL 310.61□□□□□ -0.716e-7■□□□□ 8.4
MATR3P43243 EIF3H-212ENST00000611080 1265 ntTSL 5 BASIC9.84□□□□□ -0.836e-7■□□□□ 8.4
MATR3P43243 EIF3H-211ENST00000522800 635 ntTSL 39.44□□□□□ -0.96e-7■□□□□ 8.4
MATR3P43243 EIF3H-201ENST00000276682 2041 ntTSL 2 BASIC9.21□□□□□ -0.946e-7■□□□□ 8.4
MATR3P43243 EIF3H-206ENST00000519046 488 ntTSL 38.9□□□□□ -0.986e-7■□□□□ 8.4
MATR3P43243 EIF3H-210ENST00000522453 518 ntTSL 38.53□□□□□ -1.046e-7■□□□□ 8.4
MATR3P43243 ADGRA3-209ENST00000508133 1572 ntTSL 1 (best) BASIC8.31□□□□□ -1.086e-9■□□□□ 8.4
MATR3P43243 PHC3-203ENST00000467570 2595 ntTSL 2 BASIC7.16□□□□□ -1.266e-7■□□□□ 8.4
MATR3P43243 PHC3-214ENST00000494943 5030 ntTSL 1 (best) BASIC6.78□□□□□ -1.326e-7■□□□□ 8.4
MATR3P43243 ADGRA3-201ENST00000282943 3534 ntTSL 1 (best)6.39□□□□□ -1.396e-9■□□□□ 8.4
MATR3P43243 CASC3-202ENST00000394114 2792 ntTSL 26.33□□□□□ -1.46e-7■□□□□ 8.4
MATR3P43243 EIF3H-209ENST00000521861 3959 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.456e-7■□□□□ 8.4
MATR3P43243 EIF3H-202ENST00000517974 594 ntTSL 25.39□□□□□ -1.556e-7■□□□□ 8.4
MATR3P43243 PHC3-215ENST00000495893 12666 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.736e-7■□□□□ 8.4
MATR3P43243 PHC3-216ENST00000497171 420 ntTSL 23.29□□□□□ -1.886e-7■□□□□ 8.4
MATR3P43243 PHC3-210ENST00000484931 657 ntTSL 52.97□□□□□ -1.936e-7■□□□□ 8.4
MATR3P43243 GK-206ENST00000425166 371 ntTSL 52.71□□□□□ -1.986e-9■□□□□ 8.4
MATR3P43243 PCSK9-201ENST00000302118 3637 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.25e-6■□□□□ 8.4
MATR3P43243 IGF2BP2-207ENST00000466214 138 ntTSL 53.88□□□□□ -1.795e-6■□□□□ 8.4
MATR3P43243 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC19.05■□□□□ 0.643e-15■□□□□ 8.4
MATR3P43243 GOSR2-233ENST00000640068 3103 ntTSL 5 BASIC15.08■□□□□ 0.013e-15■□□□□ 8.4
MATR3P43243 GOSR2-237ENST00000640443 3929 ntTSL 5 BASIC13.04□□□□□ -0.323e-15■□□□□ 8.4
MATR3P43243 GOSR2-219ENST00000638697 1705 ntTSL 5 BASIC12.8□□□□□ -0.363e-15■□□□□ 8.4
MATR3P43243 GOSR2-239ENST00000640608 3871 ntTSL 2 BASIC12.8□□□□□ -0.363e-15■□□□□ 8.4
MATR3P43243 GOSR2-242ENST00000640711 1083 ntTSL 5 BASIC12.05□□□□□ -0.483e-15■□□□□ 8.4
MATR3P43243 GOSR2-218ENST00000638634 3446 ntTSL 5 BASIC11.91□□□□□ -0.53e-15■□□□□ 8.4
MATR3P43243 GOSR2-213ENST00000638216 3574 ntTSL 5 BASIC11.74□□□□□ -0.533e-15■□□□□ 8.4
MATR3P43243 GOSR2-217ENST00000638579 1273 ntTSL 510.75□□□□□ -0.693e-15■□□□□ 8.4
MATR3P43243 GOSR2-220ENST00000638838 3266 ntAPPRIS ALT1 TSL 5 BASIC10.22□□□□□ -0.773e-15■□□□□ 8.4
MATR3P43243 GOSR2-215ENST00000638374 2683 ntTSL 5 BASIC10.18□□□□□ -0.783e-15■□□□□ 8.4
MATR3P43243 GOSR2-234ENST00000640138 3408 ntTSL 5 BASIC10.05□□□□□ -0.83e-15■□□□□ 8.4
MATR3P43243 GOSR2-232ENST00000640051 3964 ntAPPRIS P2 TSL 1 (best) BASIC9.49□□□□□ -0.893e-15■□□□□ 8.4
MATR3P43243 GOSR2-229ENST00000639713 622 ntTSL 59.15□□□□□ -0.943e-15■□□□□ 8.4
MATR3P43243 GOSR2-238ENST00000640495 3395 ntTSL 5 BASIC8.71□□□□□ -1.023e-15■□□□□ 8.4
MATR3P43243 GOSR2-221ENST00000638892 3808 ntTSL 5 BASIC7.88□□□□□ -1.153e-15■□□□□ 8.4
MATR3P43243 GK-204ENST00000378945 2063 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.159e-8■□□□□ 8.4
MATR3P43243 GK-205ENST00000378946 3638 ntTSL 1 (best) BASIC15.12■□□□□ 0.019e-8■□□□□ 8.4
MATR3P43243 GK-203ENST00000378943 3707 ntAPPRIS ALT1 TSL 1 (best) BASIC15.05■□□□□ 09e-8■□□□□ 8.4
MATR3P43243 GK-211ENST00000487652 565 ntTSL 414.62□□□□□ -0.079e-8■□□□□ 8.4
MATR3P43243 GK-210ENST00000481024 2401 ntTSL 214.51□□□□□ -0.099e-8■□□□□ 8.4
MATR3P43243 GK-207ENST00000427190 4573 ntTSL 5 BASIC14.04□□□□□ -0.169e-8■□□□□ 8.4
MATR3P43243 GK-208ENST00000471362 420 ntTSL 313.48□□□□□ -0.259e-8■□□□□ 8.4
MATR3P43243 GK-209ENST00000479048 582 ntTSL 49.54□□□□□ -0.889e-8■□□□□ 8.4
MATR3P43243 AC007608.4-201ENST00000623140 3365 ntBASIC13.71□□□□□ -0.211e-12■□□□□ 8.4
MATR3P43243 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.634e-10■□□□□ 8.4
Retrieved 100 of 16,209 protein–RNA pairs in 481.8 ms